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The map label for this gene is yagA [C]

Identifier: 82702696

GI number: 82702696

Start: 1805401

End: 1805673

Strand: Reverse

Name: yagA [C]

Synonym: Nmul_A1569

Alternate gene names: 82702696

Gene position: 1805673-1805401 (Counterclockwise)

Preceding gene: 82702697

Following gene: 82702695

Centisome position: 56.71

GC content: 57.14

Gene sequence:

>273_bases
TTGCTCGATCTCTGGGCGTACCATCACCAGGCACGGATCGACTTCAGCCGCCCGGGAAAGCCAACGGACAATTGCCACAT
CGAGACGTTTAACGGATCATTCCGGGACGAGTGCCTGAACTTGCACTGGTTTGAAACGCTGGAAGAGGCCAAAGCGATCA
TCGAGGACTGGCGGCGGGACTACAACGAGAGTCGGCCTCACTCGACTCTCAATGACCTGTCGCCAGCCGAATTTGTACAC
CGGGCGGGGCTTTCAAGCTTTGCCCGGGTTTAA

Upstream 100 bases:

>100_bases
CTGCGAAGCGACCATGTGGTCGCTACGTTAAATCGACTGGCCGCGGCGGGGTCCTCCTCAATATCTTTTTGTCGATAATG
GCAGCGAATTCTCGGGGCAG

Downstream 100 bases:

>100_bases
CCAGCGCCGAAAACTAACTCTCGGAATGGTCCTGGAAACCCAAGCGGATCAAAAAACGAACTTTACTAGATTCCAGATGG
CACGTTTTATGGGGAGCACA

Product: putative transposase

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MLDLWAYHHQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKAIIEDWRRDYNESRPHSTLNDLSPAEFVH
RAGLSSFARV

Sequences:

>Translated_90_residues
MLDLWAYHHQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKAIIEDWRRDYNESRPHSTLNDLSPAEFVH
RAGLSSFARV
>Mature_90_residues
MLDLWAYHHQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKAIIEDWRRDYNESRPHSTLNDLSPAEFVH
RAGLSSFARV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 10617; Mature: 10617

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLWAYHHQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKAIIEDWRRD
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
YNESRPHSTLNDLSPAEFVHRAGLSSFARV
HCCCCCCCCHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDLWAYHHQARIDFSRPGKPTDNCHIETFNGSFRDECLNLHWFETLEEAKAIIEDWRRD
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
YNESRPHSTLNDLSPAEFVHRAGLSSFARV
HCCCCCCCCHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]