| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82702607
Identifier: 82702607
GI number: 82702607
Start: 1687227
End: 1689179
Strand: Reverse
Name: 82702607
Synonym: Nmul_A1478
Alternate gene names: NA
Gene position: 1689179-1687227 (Counterclockwise)
Preceding gene: 82702608
Following gene: 82702606
Centisome position: 53.05
GC content: 51.92
Gene sequence:
>1953_bases ATGGCAAAAAGAAAAAAATCAGCTTCTCTTTCTCTTTATGCGAAATTCATTATTGCTTTGTTGATGGCTCCGGTTGCGTC GTTATCCTCTCGGGCTCAGCAAGGCCTTATGGGGGATGTAAGCAGTATCGAGAAGGGAATGAGCCGTAGTAACGATACCC GGAGCACAGCTTCTGCCACTTTGCCTGATGGCATAAGTTTTCAGTCATGGCTCCCCAAAACGCAGTTCAGCGATGCCGAA GATACATTTCAGAATAATACGAATAATGTGCAGGACTCCTCCCATCTGATATTCAATCAGCCGGGCAGTATCCACTATGA CGGTACGATTTCGGGGTCGGGCTTCCTGAATAAAGCCGACTTGAGCATGCCGACATTATCAGGAGATTCGGGTGCATCCG GCGTGCATTCCACTGCCCGAAGCAGCATCCTGGCGGTAAATGGGATGGCGGACGGGATCCTGCACGTGCTGCACCATGCT TCCCTTCACGGTACCGGACATATAGGAGCCACGAGGGTCGAAGGTACCGTGTCCCCGGGAAATTCGATTGGCATGCTTAC GGTTCACGGCAATTATGTTCAGCTGAATGGTTCCACTTATGAAGTAGAAATTCATCCCGATGGCGCCAGCGACCAGGTCA TTGTCACAGATCTTGCTGATATACAAGGGGGAACAGTTTCCGTTATTCCTGCGGGAGAGGAATTCACACCTGGCAGCCGC TTCACCATCCTGACAGCGAATAGCGGTTTGACTGGAAAATTCGATTCACTCACGCATGGCCTGATCAACCTGGGTATCTC CTATGATCCTACTCACGTCTACCTCGATGTTTTGCGCTTTTGCGATATCGGCGAGACGCCTAATCAGTGCGCCACAGGAA GCGCAGCCGAGCGGTTGGGTGGCGGCAATCCTATCTATAGAGCAATTGTCCATCAGCCAGATCAGGAGAGCGTGCGCCAG GCTTTTAACAGTCTTTCCGGCGAAGGGCACGCCAGCATTCAGGGTATTATCATTGAAGACAGCCGGTTTATACGGGAATC GGTTTCAGACCGGGTCAGGCAAGCTTTTCATCTGGTGGGTGCGCAGTCCTCTGATACCCCAGGACATATCCTTCAACAGA ACTCTGCTGCTGATGGGGCATTATGGGGACGTGTCCTGGGTTCGTTCGGCCACCGGGATGGAGGCCTTAATGCTGCCCGC ATCGGGCGTGCGCTTGCTGGAATTTTTGTGGGCGGAGATATGCGGATTGCTGATAAATTTCTTCTCGGCGTTGCCGGAGG ATACACGCAGGGATCCTATGAAGGAGCGCGTCTTTTCACCGCTTCAAGCGACAATTATCACGTTTCCGTTTATGGTGGCG GACAATGGGGACCTCTTGGCTTACGCGCGGGTTCCGCATACATCTGGCACGATCTGGAGACAGGGCGGGACGTGATCTTT CCAGGTTTTTCAAATCACCTCAATGCCGAATACAATGCGCGCGGAATACAGGTGTTCGGCGAGGTTGGTTATGGTTTGCC CCTGAACTTCATCTCACTCGAACCATTTGCACGGCTCGCTTACATAAACCTGCGTACAAAAGGTTTTCAGGAGCGTGGAG GGATATCAAGTCTGCGCAGCGGTAGCAGTCAGCAGGATACCGCATATACTACTCTGGGAATCAATGTGGCGAAGACGCTA TCCCGACTGGAGAAGATAGTTACCACGCTTCGCGGAAGCATTGGATGGCGGCATGCTATGGGTGAGATGACGCCGGTTTC GACTTTCGCTTTTGCTAATGGCTCATCCTTTGCTACAACCGGTGTGCCTATTGCCCGCAACGGAATAGTTCTCACCGGAG GCGTGGATGCTCATGTTTTTGGAACTGCAACCTTGGGCATTTATTATCAGGGACAAATTCTTCACAACATTGCCGACCAT GGTGTTCGGGCAAACCTCAGCTGGAAATTCTGA
Upstream 100 bases:
>100_bases AACCGCGTTTCCGGCTGCGGTAGGGCATTTCTACTACCATCAATCTGGACGTCCCCCGGAAGGAGGAGCGGAAGCCAGGG CTGGATTATTCCTGTAGAGC
Downstream 100 bases:
>100_bases GTTTGACGCCTGGCATTTTTCCAGTTGGCTGTCCGTCGCTTTTTACCTTTCCAGGCTTGCAAAACCCTCTGCCAGTGCGG GATACGCCAGGAAATGCAAG
Product: outer membrane autotransporter barrel protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 650; Mature: 649
Protein sequence:
>650_residues MAKRKKSASLSLYAKFIIALLMAPVASLSSRAQQGLMGDVSSIEKGMSRSNDTRSTASATLPDGISFQSWLPKTQFSDAE DTFQNNTNNVQDSSHLIFNQPGSIHYDGTISGSGFLNKADLSMPTLSGDSGASGVHSTARSSILAVNGMADGILHVLHHA SLHGTGHIGATRVEGTVSPGNSIGMLTVHGNYVQLNGSTYEVEIHPDGASDQVIVTDLADIQGGTVSVIPAGEEFTPGSR FTILTANSGLTGKFDSLTHGLINLGISYDPTHVYLDVLRFCDIGETPNQCATGSAAERLGGGNPIYRAIVHQPDQESVRQ AFNSLSGEGHASIQGIIIEDSRFIRESVSDRVRQAFHLVGAQSSDTPGHILQQNSAADGALWGRVLGSFGHRDGGLNAAR IGRALAGIFVGGDMRIADKFLLGVAGGYTQGSYEGARLFTASSDNYHVSVYGGGQWGPLGLRAGSAYIWHDLETGRDVIF PGFSNHLNAEYNARGIQVFGEVGYGLPLNFISLEPFARLAYINLRTKGFQERGGISSLRSGSSQQDTAYTTLGINVAKTL SRLEKIVTTLRGSIGWRHAMGEMTPVSTFAFANGSSFATTGVPIARNGIVLTGGVDAHVFGTATLGIYYQGQILHNIADH GVRANLSWKF
Sequences:
>Translated_650_residues MAKRKKSASLSLYAKFIIALLMAPVASLSSRAQQGLMGDVSSIEKGMSRSNDTRSTASATLPDGISFQSWLPKTQFSDAE DTFQNNTNNVQDSSHLIFNQPGSIHYDGTISGSGFLNKADLSMPTLSGDSGASGVHSTARSSILAVNGMADGILHVLHHA SLHGTGHIGATRVEGTVSPGNSIGMLTVHGNYVQLNGSTYEVEIHPDGASDQVIVTDLADIQGGTVSVIPAGEEFTPGSR FTILTANSGLTGKFDSLTHGLINLGISYDPTHVYLDVLRFCDIGETPNQCATGSAAERLGGGNPIYRAIVHQPDQESVRQ AFNSLSGEGHASIQGIIIEDSRFIRESVSDRVRQAFHLVGAQSSDTPGHILQQNSAADGALWGRVLGSFGHRDGGLNAAR IGRALAGIFVGGDMRIADKFLLGVAGGYTQGSYEGARLFTASSDNYHVSVYGGGQWGPLGLRAGSAYIWHDLETGRDVIF PGFSNHLNAEYNARGIQVFGEVGYGLPLNFISLEPFARLAYINLRTKGFQERGGISSLRSGSSQQDTAYTTLGINVAKTL SRLEKIVTTLRGSIGWRHAMGEMTPVSTFAFANGSSFATTGVPIARNGIVLTGGVDAHVFGTATLGIYYQGQILHNIADH GVRANLSWKF >Mature_649_residues AKRKKSASLSLYAKFIIALLMAPVASLSSRAQQGLMGDVSSIEKGMSRSNDTRSTASATLPDGISFQSWLPKTQFSDAED TFQNNTNNVQDSSHLIFNQPGSIHYDGTISGSGFLNKADLSMPTLSGDSGASGVHSTARSSILAVNGMADGILHVLHHAS LHGTGHIGATRVEGTVSPGNSIGMLTVHGNYVQLNGSTYEVEIHPDGASDQVIVTDLADIQGGTVSVIPAGEEFTPGSRF TILTANSGLTGKFDSLTHGLINLGISYDPTHVYLDVLRFCDIGETPNQCATGSAAERLGGGNPIYRAIVHQPDQESVRQA FNSLSGEGHASIQGIIIEDSRFIRESVSDRVRQAFHLVGAQSSDTPGHILQQNSAADGALWGRVLGSFGHRDGGLNAARI GRALAGIFVGGDMRIADKFLLGVAGGYTQGSYEGARLFTASSDNYHVSVYGGGQWGPLGLRAGSAYIWHDLETGRDVIFP GFSNHLNAEYNARGIQVFGEVGYGLPLNFISLEPFARLAYINLRTKGFQERGGISSLRSGSSQQDTAYTTLGINVAKTLS RLEKIVTTLRGSIGWRHAMGEMTPVSTFAFANGSSFATTGVPIARNGIVLTGGVDAHVFGTATLGIYYQGQILHNIADHG VRANLSWKF
Specific function: Unknown
COG id: COG4625
COG function: function code S; Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase S8 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005546 - InterPro: IPR013425 - InterPro: IPR006315 - InterPro: IPR011050 - InterPro: IPR000209 - InterPro: IPR022398 - InterPro: IPR015500 [H]
Pfam domain/function: PF03797 Autotransporter; PF00082 Peptidase_S8 [H]
EC number: NA
Molecular weight: Translated: 68824; Mature: 68693
Theoretical pI: Translated: 6.88; Mature: 6.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRKKSASLSLYAKFIIALLMAPVASLSSRAQQGLMGDVSSIEKGMSRSNDTRSTASAT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC LPDGISFQSWLPKTQFSDAEDTFQNNTNNVQDSSHLIFNQPGSIHYDGTISGSGFLNKAD CCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCEEECCEECCCCCCEECC LSMPTLSGDSGASGVHSTARSSILAVNGMADGILHVLHHASLHGTGHIGATRVEGTVSPG CCCCCCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC NSIGMLTVHGNYVQLNGSTYEVEIHPDGASDQVIVTDLADIQGGTVSVIPAGEEFTPGSR CCEEEEEEECCEEEECCCEEEEEECCCCCCCCEEEEEHHHCCCCEEEEEECCCCCCCCCE FTILTANSGLTGKFDSLTHGLINLGISYDPTHVYLDVLRFCDIGETPNQCATGSAAERLG EEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC GGNPIYRAIVHQPDQESVRQAFNSLSGEGHASIQGIIIEDSRFIRESVSDRVRQAFHLVG CCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHC AQSSDTPGHILQQNSAADGALWGRVLGSFGHRDGGLNAARIGRALAGIFVGGDMRIADKF CCCCCCCCHHEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEECCCCEEHHHH LLGVAGGYTQGSYEGARLFTASSDNYHVSVYGGGQWGPLGLRAGSAYIWHDLETGRDVIF HHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEECCCEEEEEECCCCCEEEE PGFSNHLNAEYNARGIQVFGEVGYGLPLNFISLEPFARLAYINLRTKGFQERGGISSLRS CCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCCHHCCCHHHHHC GSSQQDTAYTTLGINVAKTLSRLEKIVTTLRGSIGWRHAMGEMTPVSTFAFANGSSFATT CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCEEC GVPIARNGIVLTGGVDAHVFGTATLGIYYQGQILHNIADHGVRANLSWKF CCCEECCCEEEECCCCEEEEEEEEEEEEEECHHHHHHHHCCEEEEEEECC >Mature Secondary Structure AKRKKSASLSLYAKFIIALLMAPVASLSSRAQQGLMGDVSSIEKGMSRSNDTRSTASAT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCC LPDGISFQSWLPKTQFSDAEDTFQNNTNNVQDSSHLIFNQPGSIHYDGTISGSGFLNKAD CCCCCCHHHCCCCCCCCCCHHHHCCCCCCCCCCCCEEEECCCCEEECCEECCCCCCEECC LSMPTLSGDSGASGVHSTARSSILAVNGMADGILHVLHHASLHGTGHIGATRVEGTVSPG CCCCCCCCCCCCCCHHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCC NSIGMLTVHGNYVQLNGSTYEVEIHPDGASDQVIVTDLADIQGGTVSVIPAGEEFTPGSR CCEEEEEEECCEEEECCCEEEEEECCCCCCCCEEEEEHHHCCCCEEEEEECCCCCCCCCE FTILTANSGLTGKFDSLTHGLINLGISYDPTHVYLDVLRFCDIGETPNQCATGSAAERLG EEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC GGNPIYRAIVHQPDQESVRQAFNSLSGEGHASIQGIIIEDSRFIRESVSDRVRQAFHLVG CCCHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHC AQSSDTPGHILQQNSAADGALWGRVLGSFGHRDGGLNAARIGRALAGIFVGGDMRIADKF CCCCCCCCHHEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHEEECCCCEEHHHH LLGVAGGYTQGSYEGARLFTASSDNYHVSVYGGGQWGPLGLRAGSAYIWHDLETGRDVIF HHHCCCCCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCEEECCCEEEEEECCCCCEEEE PGFSNHLNAEYNARGIQVFGEVGYGLPLNFISLEPFARLAYINLRTKGFQERGGISSLRS CCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCCCEEEEEEEEECCCCHHCCCHHHHHC GSSQQDTAYTTLGINVAKTLSRLEKIVTTLRGSIGWRHAMGEMTPVSTFAFANGSSFATT CCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCEEEEEECCCCCEEC GVPIARNGIVLTGGVDAHVFGTATLGIYYQGQILHNIADHGVRANLSWKF CCCEECCCEEEECCCCEEEEEEEEEEEEEECHHHHHHHHCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3011754; 1639760 [H]