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The map label for this gene is yubP [H]

Identifier: 162139862

GI number: 162139862

Start: 2335622

End: 2336443

Strand: Reverse

Name: yubP [H]

Synonym: Nmul_A2041

Alternate gene names: 162139862

Gene position: 2336443-2335622 (Counterclockwise)

Preceding gene: 82703163

Following gene: 82703158

Centisome position: 73.38

GC content: 54.14

Gene sequence:

>822_bases
ATGACACTCGCTAGCACTTTCCATACCCCTGCAGTTTTCCGTTCCGAACGTCCGCTGTCCGATGAACAGATAGCGTGGGT
TGCACCCTCAATCTTTGCCCAGGGCAAGCATCACAGCCGTTCTCACCGGTACGCCTACATTCCTACCAGGGAAATCCTGC
GAGGCCTGCGCCATGAAGGATTCGAGCCTTTCATGGTTTGCCAGGCGCGCGTGCGGGACGAAGGGAAGCGGGAATACACC
AGGCATATGCTTCGTTTGCGCCATGCAAGCCAGATCAATGGCGAGGAAGCAAACGAGATCATCCTGCTCAACAGCCATGA
CGGCAGCAGTTCCTGCCAGATGATGGCCGGAATGTTCCGGTTCGTGTGCGCCAATGGAATGGTCTGTGGAGACACCTTGC
ATGATGTGCGGGTGCGGCATAACGGCGATGCCGTGAACACCATCATTGATGGCGCATATAGTGTGCTGGAGAGCTTTGAG
ACAGTCGATGAGCAGCTCGAAGAGATGAAATCGCTCACCTTGAATAAAGGCGAACAAGCGGCTTTCGCACGAGCCGCCTT
GACCCTCAAATATGAAGATTCGGAAAAACCAGTGCCAATTACGGAGCGGGATTTACTGACGCCAAGGCGTTTCTCCGATC
GCGCAAGCGACATGTGGACGACCTTCAGCCGTGTTCAGGAAAATATGATCAAGGGCGGTCTACGAGGGAGGAACAAATCT
GGGCGCTCCATGACCACCCGCGCTGTGACCGGCATCGATCAAAATGTGAAGCTTAACCGCGCCTTATGGGTACTGGCTGA
GGAAATGAGAAAGTTGAAATAA

Upstream 100 bases:

>100_bases
CACTCCCGTCGCCCCCAGGGGCGAGGCGAGGAGAGTCCGAATGAGAGGATGTGATTTTCACAACTTCTCCTTCATCAACC
ATCTCTTCAAGGAGGCAATC

Downstream 100 bases:

>100_bases
CTGTATTACAGGGGGTCAGTATCTTCGGCTGGCCCCCGTCCTGTTTCACATCCACGAAAACAAGACTGTCAGCGTGCGTG
CGCTACTGGCACATCACTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MTLASTFHTPAVFRSERPLSDEQIAWVAPSIFAQGKHHSRSHRYAYIPTREILRGLRHEGFEPFMVCQARVRDEGKREYT
RHMLRLRHASQINGEEANEIILLNSHDGSSSCQMMAGMFRFVCANGMVCGDTLHDVRVRHNGDAVNTIIDGAYSVLESFE
TVDEQLEEMKSLTLNKGEQAAFARAALTLKYEDSEKPVPITERDLLTPRRFSDRASDMWTTFSRVQENMIKGGLRGRNKS
GRSMTTRAVTGIDQNVKLNRALWVLAEEMRKLK

Sequences:

>Translated_273_residues
MTLASTFHTPAVFRSERPLSDEQIAWVAPSIFAQGKHHSRSHRYAYIPTREILRGLRHEGFEPFMVCQARVRDEGKREYT
RHMLRLRHASQINGEEANEIILLNSHDGSSSCQMMAGMFRFVCANGMVCGDTLHDVRVRHNGDAVNTIIDGAYSVLESFE
TVDEQLEEMKSLTLNKGEQAAFARAALTLKYEDSEKPVPITERDLLTPRRFSDRASDMWTTFSRVQENMIKGGLRGRNKS
GRSMTTRAVTGIDQNVKLNRALWVLAEEMRKLK
>Mature_272_residues
TLASTFHTPAVFRSERPLSDEQIAWVAPSIFAQGKHHSRSHRYAYIPTREILRGLRHEGFEPFMVCQARVRDEGKREYTR
HMLRLRHASQINGEEANEIILLNSHDGSSSCQMMAGMFRFVCANGMVCGDTLHDVRVRHNGDAVNTIIDGAYSVLESFET
VDEQLEEMKSLTLNKGEQAAFARAALTLKYEDSEKPVPITERDLLTPRRFSDRASDMWTTFSRVQENMIKGGLRGRNKSG
RSMTTRAVTGIDQNVKLNRALWVLAEEMRKLK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0380 family [H]

Homologues:

Organism=Escherichia coli, GI1788987, Length=267, Percent_Identity=54.6816479400749, Blast_Score=307, Evalue=6e-85,
Organism=Escherichia coli, GI87081705, Length=267, Percent_Identity=54.3071161048689, Blast_Score=294, Evalue=5e-81,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009276 [H]

Pfam domain/function: PF06067 DUF932 [H]

EC number: NA

Molecular weight: Translated: 31103; Mature: 30972

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLASTFHTPAVFRSERPLSDEQIAWVAPSIFAQGKHHSRSHRYAYIPTREILRGLRHEG
CCCCCCCCCCHHHCCCCCCCCCCEEEECHHHHHCCCCCCCCCCEEECCHHHHHHHHHHCC
FEPFMVCQARVRDEGKREYTRHMLRLRHASQINGEEANEIILLNSHDGSSSCQMMAGMFR
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHH
FVCANGMVCGDTLHDVRVRHNGDAVNTIIDGAYSVLESFETVDEQLEEMKSLTLNKGEQA
HHHHCCCEECCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AFARAALTLKYEDSEKPVPITERDLLTPRRFSDRASDMWTTFSRVQENMIKGGLRGRNKS
HHHHHEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRSMTTRAVTGIDQNVKLNRALWVLAEEMRKLK
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TLASTFHTPAVFRSERPLSDEQIAWVAPSIFAQGKHHSRSHRYAYIPTREILRGLRHEG
CCCCCCCCCHHHCCCCCCCCCCEEEECHHHHHCCCCCCCCCCEEECCHHHHHHHHHHCC
FEPFMVCQARVRDEGKREYTRHMLRLRHASQINGEEANEIILLNSHDGSSSCQMMAGMFR
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHH
FVCANGMVCGDTLHDVRVRHNGDAVNTIIDGAYSVLESFETVDEQLEEMKSLTLNKGEQA
HHHHCCCEECCCHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AFARAALTLKYEDSEKPVPITERDLLTPRRFSDRASDMWTTFSRVQENMIKGGLRGRNKS
HHHHHEEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
GRSMTTRAVTGIDQNVKLNRALWVLAEEMRKLK
CCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2693941; 2315017 [H]