Definition | Shigella boydii Sb227, complete genome. |
---|---|
Accession | NC_007613 |
Length | 4,519,823 |
Click here to switch to the map view.
The map label for this gene is mntH [H]
Identifier: 82544859
GI number: 82544859
Start: 2413398
End: 2414636
Strand: Reverse
Name: mntH [H]
Synonym: SBO_2417
Alternate gene names: 82544859
Gene position: 2414636-2413398 (Counterclockwise)
Preceding gene: 82544861
Following gene: 82544856
Centisome position: 53.42
GC content: 53.27
Gene sequence:
>1239_bases ATGACGAACTATCGCGTTGAGAGTAGCAGCGGACGGGCGGCGCGCAAGATGAGGCTCGCATTAATGGGACCTGCGTTCAT TGCGGCGATTGGTTATATCGATCCCGGTAACTTTGCGACCAATATTCAGGCGGGTGCCAGCTTCGGCTATCAGCTACTGT GGGTTGTCGTTTGGGCCAACCTGATGGCGATGCTGATTCAGATCCTCTCTGCCAAACTAGGGATTGCCACCGGTAAAAAT CTGGCGGAGCAGATTCGCGATCACTATCCGCGTCCCGTAGTGTGGTTCTATTGGGTTCAGGCAGAAATTATTGCGATGGC AACCGACCTGGCGGAATTTATTGGTGCGGCGATCGGTTTTAAACTCATTCTTGGTGTTTCGTTGTTGCAGGGCGCGGTGC TGACGGGGATCGCGACTTTCCTGATTTTAATGCTGCAACGTCGCGGGCAAAAACCGCTGGAGAAAGTGATTGGCGGGTTA CTGTTGTTTGTTGCCGCGGCTTACATTGTCGAGTTGATTTTCTCCCAGCCTAACCTGGCGCAGCTGGGTAAAGGAATGGT GATCCCGAGTTTACCTACTTCGGAAGCGGTCTTCCTGGCAGCAGGCGTGTTAGGGGCGACGATTATGCCGCATGTGATTT ATTTGCACTCCTCGCTCACTCAGCATTTACATGGCGGTTCGCGTCAACAACGTTATTCCGCCACCAAATGGGATGTGGCT ATCGCCATGACTATTGCCGGTTTTGTCAATCTGGCGATGATGGCTACAGCTGCGGCGGCGTTCCACTTTTCTGGTCATAC TGGTGTTGCCGATCTTGATGAGGCTTATCTGACGCTGCAACCGCTGTTAAGCCATGCTGCGGCAACGGTCTTTGGGTTAA GTCTGGTTGCTGCCGGACTGTCCTCAACGGTAGTGGGGACACTGGCAGGGCAGGTGGTGATGCAGGGGTTCATTCGCTTC CATATCCCGCTGTGGGTGCGTCGTACAGTCACCATGCTGCCGTCATTTATTGTCATTCTGATGGGATTAGATCCGACACG GATTCTGGTTATGAGTCAGGTGCTGTTAAGTTTTGGTATCGCCCTGGCGCTGGTTCCACTGCTGATTTTCACCAGTGACA GCAAGTTGATGGGCGATCTGGTGAACAGCAAACGCGTAAAACAGACAGGCTGGGTGATTGTAGTGCTGGTCGTGGCGCTG AATATCTGGTTGTTGGTGGGGACGGCGCTGGGATTGTAG
Upstream 100 bases:
>100_bases CTATCACAGAAATCACCACAATCTATTTAAATGAATTTGATAATCATTCTCGTTTATCATAGCATGAAACATAGCAAAGG CTATGTTTTAGAGGCACAAG
Downstream 100 bases:
>100_bases TTGAATGAGCGTCGCATCTGGCACTATTGGCGGATGCGGCGTAAACGCCTTATCCGCCCTACGCGTTAAAGATCCGGTTT GTAGGCCTGATAAGACGCGC
Product: manganese transport protein MntH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 412; Mature: 411
Protein sequence:
>412_residues MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKN LAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGL LLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVA IAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRF HIPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWVIVVLVVAL NIWLLVGTALGL
Sequences:
>Translated_412_residues MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKN LAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGL LLFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVA IAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRF HIPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWVIVVLVVAL NIWLLVGTALGL >Mature_411_residues TNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWANLMAMLIQILSAKLGIATGKNL AEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGFKLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGLL LFVAAAYIVELIFSQPNLAQLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVAI AMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGLSSTVVGTLAGQVVMQGFIRFH IPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGIALALVPLLIFTSDSKLMGDLVNSKRVKQTGWVIVVLVVALN IWLLVGTALGL
Specific function: H(+)-stimulated, highly selective, manganese uptake system [H]
COG id: COG1914
COG function: function code P; Mn2+ and Fe2+ transporters of the NRAMP family
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NRAMP family [H]
Homologues:
Organism=Homo sapiens, GI109255241, Length=439, Percent_Identity=31.4350797266515, Blast_Score=198, Evalue=1e-50, Organism=Homo sapiens, GI295293178, Length=439, Percent_Identity=31.2072892938497, Blast_Score=169, Evalue=3e-42, Organism=Homo sapiens, GI295293175, Length=439, Percent_Identity=31.2072892938497, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI295293173, Length=439, Percent_Identity=31.2072892938497, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI10835169, Length=439, Percent_Identity=31.2072892938497, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI295293167, Length=439, Percent_Identity=31.2072892938497, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI295293171, Length=439, Percent_Identity=31.2072892938497, Blast_Score=169, Evalue=4e-42, Organism=Homo sapiens, GI295293169, Length=439, Percent_Identity=31.2072892938497, Blast_Score=169, Evalue=4e-42, Organism=Escherichia coli, GI1788736, Length=412, Percent_Identity=100, Blast_Score=816, Evalue=0.0, Organism=Caenorhabditis elegans, GI193210616, Length=432, Percent_Identity=30.3240740740741, Blast_Score=186, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17569473, Length=375, Percent_Identity=31.7333333333333, Blast_Score=181, Evalue=5e-46, Organism=Caenorhabditis elegans, GI71999499, Length=439, Percent_Identity=28.9293849658314, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71993856, Length=221, Percent_Identity=36.6515837104072, Blast_Score=140, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323062, Length=390, Percent_Identity=33.8461538461538, Blast_Score=189, Evalue=6e-49, Organism=Saccharomyces cerevisiae, GI6324450, Length=438, Percent_Identity=29.4520547945205, Blast_Score=173, Evalue=4e-44, Organism=Saccharomyces cerevisiae, GI6321841, Length=418, Percent_Identity=31.3397129186603, Blast_Score=158, Evalue=1e-39, Organism=Drosophila melanogaster, GI24648607, Length=442, Percent_Identity=30.7692307692308, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI281362176, Length=442, Percent_Identity=30.7692307692308, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI24648609, Length=442, Percent_Identity=30.7692307692308, Blast_Score=209, Evalue=2e-54, Organism=Drosophila melanogaster, GI45553443, Length=418, Percent_Identity=31.5789473684211, Blast_Score=204, Evalue=9e-53,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023056 - InterPro: IPR001046 [H]
Pfam domain/function: PF01566 Nramp [H]
EC number: NA
Molecular weight: Translated: 44194; Mature: 44063
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWAN CCCCEECCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGF HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH KLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGLLLFVAAAYIVELIFSQPNLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVA HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH IAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ALALVPLLIFTSDSKLMGDLVNSKRVKQTGWVIVVLVVALNIWLLVGTALGL HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TNYRVESSSGRAARKMRLALMGPAFIAAIGYIDPGNFATNIQAGASFGYQLLWVVVWAN CCCEECCCCCHHHHHHHHHHHCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH LMAMLIQILSAKLGIATGKNLAEQIRDHYPRPVVWFYWVQAEIIAMATDLAEFIGAAIGF HHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHH KLILGVSLLQGAVLTGIATFLILMLQRRGQKPLEKVIGGLLLFVAAAYIVELIFSQPNLA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QLGKGMVIPSLPTSEAVFLAAGVLGATIMPHVIYLHSSLTQHLHGGSRQQRYSATKWDVA HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCHHHHH IAMTIAGFVNLAMMATAAAAFHFSGHTGVADLDEAYLTLQPLLSHAAATVFGLSLVAAGL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SSTVVGTLAGQVVMQGFIRFHIPLWVRRTVTMLPSFIVILMGLDPTRILVMSQVLLSFGI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ALALVPLLIFTSDSKLMGDLVNSKRVKQTGWVIVVLVVALNIWLLVGTALGL HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA