Definition | Shigella boydii Sb227, complete genome. |
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Accession | NC_007613 |
Length | 4,519,823 |
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The map label for this gene is yfcL [H]
Identifier: 82544806
GI number: 82544806
Start: 2352841
End: 2353119
Strand: Reverse
Name: yfcL [H]
Synonym: SBO_2362
Alternate gene names: 82544806
Gene position: 2353119-2352841 (Counterclockwise)
Preceding gene: 82544807
Following gene: 82544804
Centisome position: 52.06
GC content: 53.05
Gene sequence:
>279_bases ATGATCGCGGAGTTTGAATCACGCATTCTGGCATTAATCGACGGCATGATTGACCATGCCAGTGATGATGAGTTGTTTGC CAGTGGGTATTTGCGTGGCCACCTGACATTAGCCATCGCAGAACTGGAAAGTGGTGATGACCACTCCGCTCAGGCGGTGC ATACGACCGTTAGCCAGAGTCTGGAAAAAGCCATTGGTGCCGGTGAATTGTCGCCGCGTGACCAGGCGCTGGTGACCGAT ATGTGGGAAAACCTGTTTCAGCAGGCGTCACAGCAGTAA
Upstream 100 bases:
>100_bases ACAAAATTATTATCACACGCCGGAACTTACGGCGGAACAGTTCCCGTGGCCGGAAGCGCTCAACTGAAGCCGGTGCCACG TTTTACAATGAGGAAAGAAG
Downstream 100 bases:
>100_bases GTTGCGGCGTCTGGAGCACCATGCCTGATGCGACGCTTATCGCGTCTTATCAGGCCTACACGTCACACGTAGGTCGGATA AGGCGTTCACGCCGCATCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTD MWENLFQQASQQ
Sequences:
>Translated_92_residues MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTD MWENLFQQASQQ >Mature_92_residues MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQSLEKAIGAGELSPRDQALVTD MWENLFQQASQQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788665, Length=92, Percent_Identity=98.9130434782609, Blast_Score=184, Evalue=8e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014987 [H]
Pfam domain/function: PF08891 YfcL [H]
EC number: NA
Molecular weight: Translated: 10014; Mature: 10014
Theoretical pI: Translated: 4.03; Mature: 4.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQS CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHH LEKAIGAGELSPRDQALVTDMWENLFQQASQQ HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIAEFESRILALIDGMIDHASDDELFASGYLRGHLTLAIAELESGDDHSAQAVHTTVSQS CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHH LEKAIGAGELSPRDQALVTDMWENLFQQASQQ HHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]