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The map label for this gene is yjeF [C]

Identifier: 78779770

GI number: 78779770

Start: 1300512

End: 1302077

Strand: Reverse

Name: yjeF [C]

Synonym: PMT9312_1386

Alternate gene names: 78779770

Gene position: 1302077-1300512 (Counterclockwise)

Preceding gene: 78779772

Following gene: 78779769

Centisome position: 76.18

GC content: 33.78

Gene sequence:

>1566_bases
ATGAACGAAATTATATGGCCAACAATTGACTCAAAACATTTAATTGTTGATTCAAAGCAAATGTTGATACTAGAGAAAGA
AATGTTTTCTGATGGGATGCCCCAAGCAGCATTGATGGAAAAAGCTGGTATCCAAATTAGTAGATGGCTTTTAAAAAGGA
AACCTCTTCTAAAGAATGGAATAACTGTTTTAATAGGTCCTGGGCATAATGGCGGGGATGGTGCCGTAATAGCTAGAGAG
CTTTTTTTGCAAGGATATTTAGTTAAGGTATGGTGTCCATTCCCAATAAAAAAAACATTAACAATTGACCACGTTAATTA
TCTTACATCTATTGGTGTCACAAAATTAGAAGAGGCCCCCGATGCGAATGGGAAAGAACTCTGGATTGATGCTGTTTTTG
GTAACAATCAAACAAGAAAAGTTGATATTAAATTAATTAAATTATTTAATCAGAAATTTCATAACAAATATGGCAAGGTA
ATAAGTATTGATATTCCTACAGGATTATGTCCTGATAAAGGAGAGCCTGTTTTTGATGATGCAGTAAAGGCAGATTATAC
TTTAGCTGTAGGTCTTAATAAAATTGGGTTAACGCTAGATTCTGCTCTACCTTTTATTGGAGAATTGAACCATATTGATG
TTGGGGTACCTATTAGTAAATTGTCCAATGTTGAAAAAAAGATTTTTAAGGTTACTTACAAAGATTTAAAAAATATTGAT
TTACCTTTTCTACCAAAAAATTCCAACAAATATAAAAGAGGAAGAACATTATTAATCGCCGGGAGTGAAAAATATCCTGG
CGCTGCATACTTAGCATTAAAAGGGGCCATATCAAGTGGAGCAGGTTTTATCTCTGCTGTCCTGCCAGATTTGGTTGCTG
AATCTATTTGGCAAGTTGCTCCAGAAATAGTTTTAAAAGGAACTATGCAATCTAATCAAAATGGAAATGCATCTTTATTA
AGTGCATTAAAGAATATTGATTTAAGTGCATTTGATTCATTAGCTGTAGGTCCAGGGATAGGAATTGATAGTGATGATTG
GGAAAAATCAAAAGACTATCTTTTGAGTTTTGAAGGATTATTGATCTTGGATGCAGATGCACTCAATAGAATCTCGGAAT
CTAAATTAGGATCAAAATTTTTTTTAGGGAGGAAATTCAAAACATGGATTACACCTCATAGCAAAGAGTTTTCAAGGTTA
TTCCCTAATATCAAAGGTGAGACTAATGTTGAAATAGCTCTTAATGCAGCAAAAGAATTTAATATAAGTGTTTTGTTAAA
GGGAGCTAATAGCACAGTCGCTGACAATAAAAAAGCATGGCAACTTTTTGGAACCGATTCTCAGACAGCCAGAGCAGGAT
TGGGTGATCTTTTATCTGGATTTGTGGCGGGCAGTTCTGCGATTGATTTAACCTTTAGTAGAAATATAACAACCGAATTT
TTTGCTAAATATGTACTTTTGCATTCATTTGCTGCATCAAAGTGTAAAAAGGGATCAAATGCATCTGCAATTGGTGATGA
ATTATCTAAACTAATGAGAAATAGGAAAACGAGACAAATATCTTGA

Upstream 100 bases:

>100_bases
ATTATTATTAGAAAAATTGTTCTCTAATTTTTTATCCTTTTGTGTCTTTAACATGGAAATTTAAATTTTTGAACAGTACT
TCAATTGCTTTGTACTAATT

Downstream 100 bases:

>100_bases
AAGAAACAATTTAAGAGAGTTATTTTTAGTTTTAAACACATAAATAAACAAATATTACATGAAATCTGAAGCGCGCATTA
AATATTCCGCTATTTTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MNEIIWPTIDSKHLIVDSKQMLILEKEMFSDGMPQAALMEKAGIQISRWLLKRKPLLKNGITVLIGPGHNGGDGAVIARE
LFLQGYLVKVWCPFPIKKTLTIDHVNYLTSIGVTKLEEAPDANGKELWIDAVFGNNQTRKVDIKLIKLFNQKFHNKYGKV
ISIDIPTGLCPDKGEPVFDDAVKADYTLAVGLNKIGLTLDSALPFIGELNHIDVGVPISKLSNVEKKIFKVTYKDLKNID
LPFLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGFISAVLPDLVAESIWQVAPEIVLKGTMQSNQNGNASLL
SALKNIDLSAFDSLAVGPGIGIDSDDWEKSKDYLLSFEGLLILDADALNRISESKLGSKFFLGRKFKTWITPHSKEFSRL
FPNIKGETNVEIALNAAKEFNISVLLKGANSTVADNKKAWQLFGTDSQTARAGLGDLLSGFVAGSSAIDLTFSRNITTEF
FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNRKTRQIS

Sequences:

>Translated_521_residues
MNEIIWPTIDSKHLIVDSKQMLILEKEMFSDGMPQAALMEKAGIQISRWLLKRKPLLKNGITVLIGPGHNGGDGAVIARE
LFLQGYLVKVWCPFPIKKTLTIDHVNYLTSIGVTKLEEAPDANGKELWIDAVFGNNQTRKVDIKLIKLFNQKFHNKYGKV
ISIDIPTGLCPDKGEPVFDDAVKADYTLAVGLNKIGLTLDSALPFIGELNHIDVGVPISKLSNVEKKIFKVTYKDLKNID
LPFLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGFISAVLPDLVAESIWQVAPEIVLKGTMQSNQNGNASLL
SALKNIDLSAFDSLAVGPGIGIDSDDWEKSKDYLLSFEGLLILDADALNRISESKLGSKFFLGRKFKTWITPHSKEFSRL
FPNIKGETNVEIALNAAKEFNISVLLKGANSTVADNKKAWQLFGTDSQTARAGLGDLLSGFVAGSSAIDLTFSRNITTEF
FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNRKTRQIS
>Mature_521_residues
MNEIIWPTIDSKHLIVDSKQMLILEKEMFSDGMPQAALMEKAGIQISRWLLKRKPLLKNGITVLIGPGHNGGDGAVIARE
LFLQGYLVKVWCPFPIKKTLTIDHVNYLTSIGVTKLEEAPDANGKELWIDAVFGNNQTRKVDIKLIKLFNQKFHNKYGKV
ISIDIPTGLCPDKGEPVFDDAVKADYTLAVGLNKIGLTLDSALPFIGELNHIDVGVPISKLSNVEKKIFKVTYKDLKNID
LPFLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGFISAVLPDLVAESIWQVAPEIVLKGTMQSNQNGNASLL
SALKNIDLSAFDSLAVGPGIGIDSDDWEKSKDYLLSFEGLLILDADALNRISESKLGSKFFLGRKFKTWITPHSKEFSRL
FPNIKGETNVEIALNAAKEFNISVLLKGANSTVADNKKAWQLFGTDSQTARAGLGDLLSGFVAGSSAIDLTFSRNITTEF
FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNRKTRQIS

Specific function: Unknown

COG id: COG0062

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Escherichia coli, GI1790609, Length=410, Percent_Identity=25.3658536585366, Blast_Score=92, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI17554656, Length=304, Percent_Identity=24.0131578947368, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI221329809, Length=166, Percent_Identity=30.7228915662651, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 57021; Mature: 57021

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIIWPTIDSKHLIVDSKQMLILEKEMFSDGMPQAALMEKAGIQISRWLLKRKPLLKNG
CCCCCCCCCCCCEEEECCCCEEEEEHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCHHHCC
ITVLIGPGHNGGDGAVIARELFLQGYLVKVWCPFPIKKTLTIDHVNYLTSIGVTKLEEAP
CEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEHHHHHHHHCCCHHHHCCC
DANGKELWIDAVFGNNQTRKVDIKLIKLFNQKFHNKYGKVISIDIPTGLCPDKGEPVFDD
CCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHH
AVKADYTLAVGLNKIGLTLDSALPFIGELNHIDVGVPISKLSNVEKKIFKVTYKDLKNID
HHCCCEEEEEECCHHCEEHHHCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
LPFLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGFISAVLPDLVAESIWQVA
CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
PEIVLKGTMQSNQNGNASLLSALKNIDLSAFDSLAVGPGIGIDSDDWEKSKDYLLSFEGL
HHHHEECCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCE
LILDADALNRISESKLGSKFFLGRKFKTWITPHSKEFSRLFPNIKGETNVEIALNAAKEF
EEEEHHHHHHHHHHHCCCCEEECCCCEEECCCCCHHHHHHCCCCCCCCCEEEEEECCCCC
NISVLLKGANSTVADNKKAWQLFGTDSQTARAGLGDLLSGFVAGSSAIDLTFSRNITTEF
CEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNRKTRQIS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNEIIWPTIDSKHLIVDSKQMLILEKEMFSDGMPQAALMEKAGIQISRWLLKRKPLLKNG
CCCCCCCCCCCCEEEECCCCEEEEEHHHHCCCCCHHHHHHHCCCHHHHHHHHCCCHHHCC
ITVLIGPGHNGGDGAVIARELFLQGYLVKVWCPFPIKKTLTIDHVNYLTSIGVTKLEEAP
CEEEEECCCCCCCHHHHHHHHHHCCEEEEEEECCCCCCEEEEHHHHHHHHCCCHHHHCCC
DANGKELWIDAVFGNNQTRKVDIKLIKLFNQKFHNKYGKVISIDIPTGLCPDKGEPVFDD
CCCCCEEEEEEEECCCCCEEEHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHH
AVKADYTLAVGLNKIGLTLDSALPFIGELNHIDVGVPISKLSNVEKKIFKVTYKDLKNID
HHCCCEEEEEECCHHCEEHHHCCCHHCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCC
LPFLPKNSNKYKRGRTLLIAGSEKYPGAAYLALKGAISSGAGFISAVLPDLVAESIWQVA
CCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH
PEIVLKGTMQSNQNGNASLLSALKNIDLSAFDSLAVGPGIGIDSDDWEKSKDYLLSFEGL
HHHHEECCCCCCCCCCHHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCE
LILDADALNRISESKLGSKFFLGRKFKTWITPHSKEFSRLFPNIKGETNVEIALNAAKEF
EEEEHHHHHHHHHHHCCCCEEECCCCEEECCCCCHHHHHHCCCCCCCCCEEEEEECCCCC
NISVLLKGANSTVADNKKAWQLFGTDSQTARAGLGDLLSGFVAGSSAIDLTFSRNITTEF
CEEEEEECCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHH
FAKYVLLHSFAASKCKKGSNASAIGDELSKLMRNRKTRQIS
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]