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The map label for this gene is 78779728

Identifier: 78779728

GI number: 78779728

Start: 1260189

End: 1260929

Strand: Reverse

Name: 78779728

Synonym: PMT9312_1344

Alternate gene names: NA

Gene position: 1260929-1260189 (Counterclockwise)

Preceding gene: 78779740

Following gene: 78779722

Centisome position: 73.77

GC content: 21.59

Gene sequence:

>741_bases
ATGTTTAGATATTTTATTTATAAAGTCAAAAAATATATTAAAAGAAGTATTTTTTACATTCATTTTATTGCAATTAAAGA
TTATTTAGTTATCCCCAAAAACTCTACAATAATTGTACACATCGGCAAAACAGGCGGCTCTTCATTATTTAAAAGCCTTA
AATTATTAAATTTATTTCATATATATAAGGTAGTCCATGTAAGAAAAGTTATTTATAGAAAAGATTTAAAATATATAATT
CTGATAAGAAATCCTATTAATAGAACAATATCGGCATTTAATTATAGATATAAAAATCTTATTATCTTAAAAAGGAATGA
AGATAGATTTTTTAATGAGAAAGCAATTCTAAAAAAATATAAATCATTAAATAATCTTGCAGAAAATTTATATTTTAAAA
ATGGCCGACTAAATAAGAAAGTCTCTGAAGAATTTAAAAGTATTCACCATCTTAATGAGGATATAAATTTTTACTTAAAA
GATTTATTAAAAAAATGTAGTTCAAAACAAATTCTTTCTGTGATCACACAAGAGAATTTATACGAAGATGCTTTAAAGAC
GTTTAATATAGAATGTCATGCAAAGGAAAAAGTTGGTAATAATTCATTAAATCAAATTCATTTAACAGATTTTGCTAGTT
ACAATTTAAGGGAATATCTAAATAAAGATTATCTACAGATTGAGAAACTTTATAAAATGGGTAAATTATCAAATAAAAAT
TATAAAAGTCTAATTTGCTAG

Upstream 100 bases:

>100_bases
AACAATATAAAATATCCAAAAATTCTTTTAACCATTTTTTATTCAATATAGTATTATTTCCTTAATAGTTAAAGGAAAGG
AATCAAAGAAAAGCTCAATT

Downstream 100 bases:

>100_bases
TTATAAAAAAATTGATTTTTTATTCTTTTTTAAGAGGAGAAATAGTTTCATACAATTCAAAATCTTTTTTATATATTTGT
TGAATTTTTTTTATTTGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MFRYFIYKVKKYIKRSIFYIHFIAIKDYLVIPKNSTIIVHIGKTGGSSLFKSLKLLNLFHIYKVVHVRKVIYRKDLKYII
LIRNPINRTISAFNYRYKNLIILKRNEDRFFNEKAILKKYKSLNNLAENLYFKNGRLNKKVSEEFKSIHHLNEDINFYLK
DLLKKCSSKQILSVITQENLYEDALKTFNIECHAKEKVGNNSLNQIHLTDFASYNLREYLNKDYLQIEKLYKMGKLSNKN
YKSLIC

Sequences:

>Translated_246_residues
MFRYFIYKVKKYIKRSIFYIHFIAIKDYLVIPKNSTIIVHIGKTGGSSLFKSLKLLNLFHIYKVVHVRKVIYRKDLKYII
LIRNPINRTISAFNYRYKNLIILKRNEDRFFNEKAILKKYKSLNNLAENLYFKNGRLNKKVSEEFKSIHHLNEDINFYLK
DLLKKCSSKQILSVITQENLYEDALKTFNIECHAKEKVGNNSLNQIHLTDFASYNLREYLNKDYLQIEKLYKMGKLSNKN
YKSLIC
>Mature_246_residues
MFRYFIYKVKKYIKRSIFYIHFIAIKDYLVIPKNSTIIVHIGKTGGSSLFKSLKLLNLFHIYKVVHVRKVIYRKDLKYII
LIRNPINRTISAFNYRYKNLIILKRNEDRFFNEKAILKKYKSLNNLAENLYFKNGRLNKKVSEEFKSIHHLNEDINFYLK
DLLKKCSSKQILSVITQENLYEDALKTFNIECHAKEKVGNNSLNQIHLTDFASYNLREYLNKDYLQIEKLYKMGKLSNKN
YKSLIC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29490; Mature: 29490

Theoretical pI: Translated: 10.40; Mature: 10.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRYFIYKVKKYIKRSIFYIHFIAIKDYLVIPKNSTIIVHIGKTGGSSLFKSLKLLNLFH
CHHHHHHHHHHHHHHHHHHHEEEEEECEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHH
IYKVVHVRKVIYRKDLKYIILIRNPINRTISAFNYRYKNLIILKRNEDRFFNEKAILKKY
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCEEEEEEEEEEECCCHHHHHHHHHHHH
KSLNNLAENLYFKNGRLNKKVSEEFKSIHHLNEDINFYLKDLLKKCSSKQILSVITQENL
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YEDALKTFNIECHAKEKVGNNSLNQIHLTDFASYNLREYLNKDYLQIEKLYKMGKLSNKN
HHHHHHHCCCEEEEHHHCCCCCCCEEEEHHHHCCCHHHHHCHHHHHHHHHHHHHCCCCCC
YKSLIC
CHHCCC
>Mature Secondary Structure
MFRYFIYKVKKYIKRSIFYIHFIAIKDYLVIPKNSTIIVHIGKTGGSSLFKSLKLLNLFH
CHHHHHHHHHHHHHHHHHHHEEEEEECEEEECCCCEEEEEECCCCCHHHHHHHHHHHHHH
IYKVVHVRKVIYRKDLKYIILIRNPINRTISAFNYRYKNLIILKRNEDRFFNEKAILKKY
HHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCEEEEEEEEEEECCCHHHHHHHHHHHH
KSLNNLAENLYFKNGRLNKKVSEEFKSIHHLNEDINFYLKDLLKKCSSKQILSVITQENL
HHHHHHHHHHEECCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
YEDALKTFNIECHAKEKVGNNSLNQIHLTDFASYNLREYLNKDYLQIEKLYKMGKLSNKN
HHHHHHHCCCEEEEHHHCCCCCCCEEEEHHHHCCCHHHHHCHHHHHHHHHHHHHCCCCCC
YKSLIC
CHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA