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The map label for this gene is yedA [C]

Identifier: 78779663

GI number: 78779663

Start: 1188804

End: 1189745

Strand: Reverse

Name: yedA [C]

Synonym: PMT9312_1280

Alternate gene names: 78779663

Gene position: 1189745-1188804 (Counterclockwise)

Preceding gene: 78779676

Following gene: 78779662

Centisome position: 69.61

GC content: 36.09

Gene sequence:

>942_bases
ATGAATTCAATCCTAAATTGGTTTTTAATGTTACTCCCTTTTGCACTTTGGGGGACTTCAATGGCAGCTATGACCCCCTT
GGTATCTAGTGCTGGACCCGAGTTTGTTGCTTCTTTAAGATTACTTCCTGCAGGGATTCTTGTTCTAATTACAACATATT
TGTTTAAAAGAGATTTGAAAATTTATAAATGCGATTTGAAGTGGTTTTTTGTTTTTACAATTGTCGACGCTACTTTTTTT
CAGTTATTTTTAACTTATGGCATTGAAAAAACTGGAGCAGGTCTAGGCTCTGTATTGATTGATTCTCAGCCCCTTTTGGT
AGCTATTTTAGCAAGGGCAATTTTTGGAAATTTAATTAATCCAATAGGGTGGTTAGGCTTACTTTTTGGCCTGGGAGGAA
TAGTATTCTTAGGTGTTCCGCAAGAACTTCTAGGAAATTGGTGGTTAATGTCTAATAAGGCCATGACTGATGTGGCTTTT
AACTTTGGAGAGATCTGGATGCTCGCAGCTTCGCTAGCTATGGCACTAGGAACAATTTTAATTAGATTCACCTGTACTAA
AAGTGATCCAGTTGCTGTTACAGGATGGCACATGGTTTTCGGTAGTGTGCCCTTAATTATTAGGCATTGCTTACAATCAA
ATTTTCAAATAATCCCTAATTGGTCAATATTTGAATGGGGACTCATGTCATTTGCAAGTATCTTTGGAGGAGCAATAGCT
TATGGATTGTTTTTTTACTTTGCTAACAATAAAGAAATAACTGGATTTAGTACTCTTGCTTTTTTAACTCCTGTATTCGC
TCTTCTCAGTGGAGGTGTTTGGTTAGATGAAAGACTTACTATTGTTCAATGGATAGGAGTAGTTTTTGTGCTTATCTCGG
TATTTTTTGTTAGCCAGAGAAGGCTTTTATGGGAAAATAAATTCACAGACACTAATATTTAA

Upstream 100 bases:

>100_bases
AATACGAGCCATTCTTTTTTTTGACTTTCGTCTAAAAGGCCAAATCATTCTTTTAAGGTAAATACATAAAACTACTTTAA
AAAGATTATCAGCAGACTTA

Downstream 100 bases:

>100_bases
ATAGGTTCTTGGTATAAAAAGTCTAATAATGCGAATAGTTTTGATTAGTACTCCAATAGGCTTCATTGGAAGTGGAAAAG
GTGGAGGAGTTGAATTAACT

Product: SMR family transporter PecM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 313

Protein sequence:

>313_residues
MNSILNWFLMLLPFALWGTSMAAMTPLVSSAGPEFVASLRLLPAGILVLITTYLFKRDLKIYKCDLKWFFVFTIVDATFF
QLFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLINPIGWLGLLFGLGGIVFLGVPQELLGNWWLMSNKAMTDVAF
NFGEIWMLAASLAMALGTILIRFTCTKSDPVAVTGWHMVFGSVPLIIRHCLQSNFQIIPNWSIFEWGLMSFASIFGGAIA
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFFVSQRRLLWENKFTDTNI

Sequences:

>Translated_313_residues
MNSILNWFLMLLPFALWGTSMAAMTPLVSSAGPEFVASLRLLPAGILVLITTYLFKRDLKIYKCDLKWFFVFTIVDATFF
QLFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLINPIGWLGLLFGLGGIVFLGVPQELLGNWWLMSNKAMTDVAF
NFGEIWMLAASLAMALGTILIRFTCTKSDPVAVTGWHMVFGSVPLIIRHCLQSNFQIIPNWSIFEWGLMSFASIFGGAIA
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFFVSQRRLLWENKFTDTNI
>Mature_313_residues
MNSILNWFLMLLPFALWGTSMAAMTPLVSSAGPEFVASLRLLPAGILVLITTYLFKRDLKIYKCDLKWFFVFTIVDATFF
QLFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLINPIGWLGLLFGLGGIVFLGVPQELLGNWWLMSNKAMTDVAF
NFGEIWMLAASLAMALGTILIRFTCTKSDPVAVTGWHMVFGSVPLIIRHCLQSNFQIIPNWSIFEWGLMSFASIFGGAIA
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFFVSQRRLLWENKFTDTNI

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 34895; Mature: 34895

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSILNWFLMLLPFALWGTSMAAMTPLVSSAGPEFVASLRLLPAGILVLITTYLFKRDLK
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
IYKCDLKWFFVFTIVDATFFQLFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLIN
EEEECHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
PIGWLGLLFGLGGIVFLGVPQELLGNWWLMSNKAMTDVAFNFGEIWMLAASLAMALGTIL
HHHHHHHHHHHHHHEEECCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRFTCTKSDPVAVTGWHMVFGSVPLIIRHCLQSNFQIIPNWSIFEWGLMSFASIFGGAIA
HHEEECCCCCEEEEHHHHHHCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFFVSQR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLWENKFTDTNI
HHHHCCCCCCCCC
>Mature Secondary Structure
MNSILNWFLMLLPFALWGTSMAAMTPLVSSAGPEFVASLRLLPAGILVLITTYLFKRDLK
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
IYKCDLKWFFVFTIVDATFFQLFLTYGIEKTGAGLGSVLIDSQPLLVAILARAIFGNLIN
EEEECHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCHHHCCCCHHHHHHHHHHHHHHHHH
PIGWLGLLFGLGGIVFLGVPQELLGNWWLMSNKAMTDVAFNFGEIWMLAASLAMALGTIL
HHHHHHHHHHHHHHEEECCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IRFTCTKSDPVAVTGWHMVFGSVPLIIRHCLQSNFQIIPNWSIFEWGLMSFASIFGGAIA
HHEEECCCCCEEEEHHHHHHCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHHHHHHH
YGLFFYFANNKEITGFSTLAFLTPVFALLSGGVWLDERLTIVQWIGVVFVLISVFFVSQR
HHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLWENKFTDTNI
HHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]