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The map label for this gene is yoqW [H]

Identifier: 78779590

GI number: 78779590

Start: 1128315

End: 1128953

Strand: Reverse

Name: yoqW [H]

Synonym: PMT9312_1207

Alternate gene names: 78779590

Gene position: 1128953-1128315 (Counterclockwise)

Preceding gene: 78779592

Following gene: 78779589

Centisome position: 66.05

GC content: 34.27

Gene sequence:

>639_bases
ATGTGTGGAAGATTTGAGTTGAAAACTAAGTTTAATAAATTACCAAAGGTTTTGAGACAAGACTTTCCAATTGGACTTGA
TACTAAGTACGAGACTCAAAATTTGATAAGACCTACTGATCCTGTTCTTGTAATTAAAAACGAAGGGAGAATTAAAACTA
CTTTTATGTCATGGGGTTTTATTACACCTTGGACTAAAAACCCATTTGATAAAGAAAGACCAAGACCGTTTAACGCAAGA
TCAGAAACCGTAGACGAAAAAAAATTATTTAGTGGAAGTTGGAAACATAAAAGATGCTTAATACCAGCGAGTGGTTTTTT
TGAAAAGAAATATCGTATTAGAAAGGAAAATTATGATACTTTTTGGTTAGGAGGAATATGGAGCAGGTGGACTTCTCCTG
ATGGTGCTGAACTAGAAAGTTGCTGCGTTTTAACAACTAAGCCTAATGAATTAGTAAAACCTTTACATCACAGAATGCCT
GTTATTGTTCCTGATGGATATGAAAAACAATGGACAGAGCAGGTGAAAAATGCTGATGAATTAAAAGGTTTATTTCCAAT
CATGTTGGGTTGGTCGCCGGATGGATGGCTAATAGAAGATGTGAAGAAAAAAAAGACTGATCAGATGAGTTTGTTTTAA

Upstream 100 bases:

>100_bases
GAATTAATTTTTTTATTTGAGAACATTGAAATTCGATCTAAAATAAGGTAAATTTGCCCTTTTTTATAAAGTGAGTTTTT
AAAAAGATTTTTTAAAATCA

Downstream 100 bases:

>100_bases
GTGAAAGGCTTGATAATTCAAGCAATAAAAAGATAGTTATATTTATTGCTGTGGAATATTTTGGGTATTTTGGCATTACC
AAAGGAGTAAATTAATTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MCGRFELKTKFNKLPKVLRQDFPIGLDTKYETQNLIRPTDPVLVIKNEGRIKTTFMSWGFITPWTKNPFDKERPRPFNAR
SETVDEKKLFSGSWKHKRCLIPASGFFEKKYRIRKENYDTFWLGGIWSRWTSPDGAELESCCVLTTKPNELVKPLHHRMP
VIVPDGYEKQWTEQVKNADELKGLFPIMLGWSPDGWLIEDVKKKKTDQMSLF

Sequences:

>Translated_212_residues
MCGRFELKTKFNKLPKVLRQDFPIGLDTKYETQNLIRPTDPVLVIKNEGRIKTTFMSWGFITPWTKNPFDKERPRPFNAR
SETVDEKKLFSGSWKHKRCLIPASGFFEKKYRIRKENYDTFWLGGIWSRWTSPDGAELESCCVLTTKPNELVKPLHHRMP
VIVPDGYEKQWTEQVKNADELKGLFPIMLGWSPDGWLIEDVKKKKTDQMSLF
>Mature_212_residues
MCGRFELKTKFNKLPKVLRQDFPIGLDTKYETQNLIRPTDPVLVIKNEGRIKTTFMSWGFITPWTKNPFDKERPRPFNAR
SETVDEKKLFSGSWKHKRCLIPASGFFEKKYRIRKENYDTFWLGGIWSRWTSPDGAELESCCVLTTKPNELVKPLHHRMP
VIVPDGYEKQWTEQVKNADELKGLFPIMLGWSPDGWLIEDVKKKKTDQMSLF

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323761, Length=201, Percent_Identity=26.865671641791, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 24930; Mature: 24930

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFELKTKFNKLPKVLRQDFPIGLDTKYETQNLIRPTDPVLVIKNEGRIKTTFMSWGF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCC
ITPWTKNPFDKERPRPFNARSETVDEKKLFSGSWKHKRCLIPASGFFEKKYRIRKENYDT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCCCE
FWLGGIWSRWTSPDGAELESCCVLTTKPNELVKPLHHRMPVIVPDGYEKQWTEQVKNADE
EEECCHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEECCCCHHHHHHHHCCHHH
LKGLFPIMLGWSPDGWLIEDVKKKKTDQMSLF
HCCCEEEEEECCCCCCHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MCGRFELKTKFNKLPKVLRQDFPIGLDTKYETQNLIRPTDPVLVIKNEGRIKTTFMSWGF
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEEEECCC
ITPWTKNPFDKERPRPFNARSETVDEKKLFSGSWKHKRCLIPASGFFEKKYRIRKENYDT
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCHHHHHHHHCCCCCE
FWLGGIWSRWTSPDGAELESCCVLTTKPNELVKPLHHRMPVIVPDGYEKQWTEQVKNADE
EEECCHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCEEECCCCHHHHHHHHCCHHH
LKGLFPIMLGWSPDGWLIEDVKKKKTDQMSLF
HCCCEEEEEECCCCCCHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]