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The map label for this gene is ppdD [C]

Identifier: 78779584

GI number: 78779584

Start: 1121821

End: 1122390

Strand: Reverse

Name: ppdD [C]

Synonym: PMT9312_1201

Alternate gene names: 78779584

Gene position: 1122390-1121821 (Counterclockwise)

Preceding gene: 78779586

Following gene: 78779583

Centisome position: 65.67

GC content: 32.98

Gene sequence:

>570_bases
ATGTTTTCAAATTTATTTGTTAAAGATAAAAAAGCATTCACTTTAGTAGAGTTAGTAGTTGTCGTTGGCATTATTGGAAT
ATTATCTGCAATAGCAATACCAAGTTTTCGAAACACCGTCTATAAAACTAGGCAAAAAGAAGCAACTACATTATTGTCTT
CATATTTGAGATCTGCTGAAGCATATTATGTTGAATTTGGTTCGATAGTTCAAAATACCTCTGAACTTGGACATTTTTTG
AAGATCACAGGTTGTTGTTCAGTTTGTAGTTGGGACCATAATCCAAAATATTGCAAATCAAATTCACCAATGAACTTTAA
TGATAGAGAATTAGTAAGTTGGAGAACTGATAACGGCCTATATACTATTGCTATGCATCCTCAGGCGGAAGAGTTAATTT
ATTTCATAGCTTATCCAGAACACGAAATGGGCTTCCAAGGTTATGGAGTTGCTGCATGCTTTAGTGGGAAATATGGAATT
AAAAAAATTATTGAAAATAATAATAATTTAGAAAAGATTACACATCCACCAGGATGTGGAGAGAACAATGATGATTGGGT
TCACCCGTAA

Upstream 100 bases:

>100_bases
TAAGTTCCCTTTTCACTGAACCATTATTATTAACTTTGAAATTGCTATCCATATTTGGGTAGTAATTGACTGTTGAATGA
TTATTCTTAAATTCTAGATT

Downstream 100 bases:

>100_bases
ATTATTCTTAGATAAATTAAATATTTAAAGATTAAACTTTACCTATGTAATCACTTTAAAATGAAATTACTAAAAAAAAG
AAAATTACTTAATTCATATG

Product: Tfp pilus assembly protein PilE-like

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MFSNLFVKDKKAFTLVELVVVVGIIGILSAIAIPSFRNTVYKTRQKEATTLLSSYLRSAEAYYVEFGSIVQNTSELGHFL
KITGCCSVCSWDHNPKYCKSNSPMNFNDRELVSWRTDNGLYTIAMHPQAEELIYFIAYPEHEMGFQGYGVAACFSGKYGI
KKIIENNNNLEKITHPPGCGENNDDWVHP

Sequences:

>Translated_189_residues
MFSNLFVKDKKAFTLVELVVVVGIIGILSAIAIPSFRNTVYKTRQKEATTLLSSYLRSAEAYYVEFGSIVQNTSELGHFL
KITGCCSVCSWDHNPKYCKSNSPMNFNDRELVSWRTDNGLYTIAMHPQAEELIYFIAYPEHEMGFQGYGVAACFSGKYGI
KKIIENNNNLEKITHPPGCGENNDDWVHP
>Mature_189_residues
MFSNLFVKDKKAFTLVELVVVVGIIGILSAIAIPSFRNTVYKTRQKEATTLLSSYLRSAEAYYVEFGSIVQNTSELGHFL
KITGCCSVCSWDHNPKYCKSNSPMNFNDRELVSWRTDNGLYTIAMHPQAEELIYFIAYPEHEMGFQGYGVAACFSGKYGI
KKIIENNNNLEKITHPPGCGENNDDWVHP

Specific function: Not Yet Known. [C]

COG id: COG2165

COG function: function code NU; Type II secretory pathway, pseudopilin PulG

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21319; Mature: 21319

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSNLFVKDKKAFTLVELVVVVGIIGILSAIAIPSFRNTVYKTRQKEATTLLSSYLRSAE
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AYYVEFGSIVQNTSELGHFLKITGCCSVCSWDHNPKYCKSNSPMNFNDRELVSWRTDNGL
HHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE
YTIAMHPQAEELIYFIAYPEHEMGFQGYGVAACFSGKYGIKKIIENNNNLEKITHPPGCG
EEEEECCCHHHEEEEEEECCHHCCCCCCCEEEEECCCHHHHHHHHCCCCCEEECCCCCCC
ENNDDWVHP
CCCCCCCCC
>Mature Secondary Structure
MFSNLFVKDKKAFTLVELVVVVGIIGILSAIAIPSFRNTVYKTRQKEATTLLSSYLRSAE
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AYYVEFGSIVQNTSELGHFLKITGCCSVCSWDHNPKYCKSNSPMNFNDRELVSWRTDNGL
HHEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEECCCCE
YTIAMHPQAEELIYFIAYPEHEMGFQGYGVAACFSGKYGIKKIIENNNNLEKITHPPGCG
EEEEECCCHHHEEEEEEECCHHCCCCCCCEEEEECCCHHHHHHHHCCCCCEEECCCCCCC
ENNDDWVHP
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA