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The map label for this gene is 78779554

Identifier: 78779554

GI number: 78779554

Start: 1087039

End: 1087716

Strand: Reverse

Name: 78779554

Synonym: PMT9312_1171

Alternate gene names: NA

Gene position: 1087716-1087039 (Counterclockwise)

Preceding gene: 78779555

Following gene: 78779553

Centisome position: 63.64

GC content: 33.48

Gene sequence:

>678_bases
ATGGGCTATAGAAGCTTATGCAATACTAAAAAAACGACTAGAGGAACAAAAAGTAGCGGGCGGTATAGAAAATTAGTTAT
TTACAATCTTGAACTTTTCAAATGTTTAGGAAGAGTGGAGGGACAGCTACTTATTAATGATTTCATTTTTAATATGAGTT
TAAATAAAATATTTGAAAAAAAGAATGGATATAGTATTTCTGAATTATCAGTTGTTTTGGCTATATTTGGAGGCTTAATT
TTTTTAGGACAATTTGTTTATCAGGATATAGTTCGTAAAGCTAGACAAGCTGTGGCCGCAACTTATGTTGATCAGGTGCT
AACAACAGCTCATGCATCTATTATTCAAAATGATTATCTCCCAGAAGGATGGGAAGAAATAGGAGATATTCCATCGGGCC
CTCTGGAAAGTTGTGAAAAATATAATTCTGATTGTAGTGGAGAAATTAAAGTGATTCAAAAGGGTAATTATCTAATTGGA
ATGTACTCCAATGATTCTGAATTAAGAGTTAGTGCATGGAGATTTAGCAATGAAGGTTCAACTTCAAGAAATATGAGTGT
CTTTGGTTGTGTTTCTAAGAATGGCTCACGATCAATTTATAAATGGGGTAAAAACGAATATTACCAAGGGCCAGGCTGGC
ATATGCAATCAAATCCTTGGAATGCTTGTTCATACTAA

Upstream 100 bases:

>100_bases
CGGTAATAATTTATCTAGGCTTCGTAGAAGTATTTAAAATTGGCAAATTAATTAGAGAGAAGTTAGAAGCTTATTTTGAT
GAATTACGATTATCTAGAGA

Downstream 100 bases:

>100_bases
AAATTAATAACGTTTTGACGGCAATTTGACGGCTCTTGCTGCCGTCAGATTTTCCAATAAAAAAGCGAGTCTGGGTAAAT
CCCTAGTATGAATTGGTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MGYRSLCNTKKTTRGTKSSGRYRKLVIYNLELFKCLGRVEGQLLINDFIFNMSLNKIFEKKNGYSISELSVVLAIFGGLI
FLGQFVYQDIVRKARQAVAATYVDQVLTTAHASIIQNDYLPEGWEEIGDIPSGPLESCEKYNSDCSGEIKVIQKGNYLIG
MYSNDSELRVSAWRFSNEGSTSRNMSVFGCVSKNGSRSIYKWGKNEYYQGPGWHMQSNPWNACSY

Sequences:

>Translated_225_residues
MGYRSLCNTKKTTRGTKSSGRYRKLVIYNLELFKCLGRVEGQLLINDFIFNMSLNKIFEKKNGYSISELSVVLAIFGGLI
FLGQFVYQDIVRKARQAVAATYVDQVLTTAHASIIQNDYLPEGWEEIGDIPSGPLESCEKYNSDCSGEIKVIQKGNYLIG
MYSNDSELRVSAWRFSNEGSTSRNMSVFGCVSKNGSRSIYKWGKNEYYQGPGWHMQSNPWNACSY
>Mature_224_residues
GYRSLCNTKKTTRGTKSSGRYRKLVIYNLELFKCLGRVEGQLLINDFIFNMSLNKIFEKKNGYSISELSVVLAIFGGLIF
LGQFVYQDIVRKARQAVAATYVDQVLTTAHASIIQNDYLPEGWEEIGDIPSGPLESCEKYNSDCSGEIKVIQKGNYLIGM
YSNDSELRVSAWRFSNEGSTSRNMSVFGCVSKNGSRSIYKWGKNEYYQGPGWHMQSNPWNACSY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25456; Mature: 25325

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYRSLCNTKKTTRGTKSSGRYRKLVIYNLELFKCLGRVEGQLLINDFIFNMSLNKIFEK
CCCHHHHCCCHHCCCCCCCCCEEEEEEECHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH
KNGYSISELSVVLAIFGGLIFLGQFVYQDIVRKARQAVAATYVDQVLTTAHASIIQNDYL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEGWEEIGDIPSGPLESCEKYNSDCSGEIKVIQKGNYLIGMYSNDSELRVSAWRFSNEGS
CCCHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCC
TSRNMSVFGCVSKNGSRSIYKWGKNEYYQGPGWHMQSNPWNACSY
CCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
GYRSLCNTKKTTRGTKSSGRYRKLVIYNLELFKCLGRVEGQLLINDFIFNMSLNKIFEK
CCHHHHCCCHHCCCCCCCCCEEEEEEECHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHH
KNGYSISELSVVLAIFGGLIFLGQFVYQDIVRKARQAVAATYVDQVLTTAHASIIQNDYL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PEGWEEIGDIPSGPLESCEKYNSDCSGEIKVIQKGNYLIGMYSNDSELRVSAWRFSNEGS
CCCHHHHCCCCCCHHHHHHHHCCCCCCEEEEEECCCEEEEEECCCCCEEEEEEEECCCCC
TSRNMSVFGCVSKNGSRSIYKWGKNEYYQGPGWHMQSNPWNACSY
CCCCCEEEEEECCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA