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The map label for this gene is 78779553

Identifier: 78779553

GI number: 78779553

Start: 1086217

End: 1086822

Strand: Reverse

Name: 78779553

Synonym: PMT9312_1170

Alternate gene names: NA

Gene position: 1086822-1086217 (Counterclockwise)

Preceding gene: 78779554

Following gene: 78779552

Centisome position: 63.59

GC content: 32.67

Gene sequence:

>606_bases
ATGACTAGAAAGTTTTTTTTTGTTGCACTATTAATTTTTCCGCAATATTTAACTTCAGTTCAATCATCTGCTTTTAATGA
ATCTCAATTAAATAAAATTTCAGATGAATTATTAATTTCTGGTTGGAAACCATTATTAGATAAAAATATTAAAGATAAAA
AAGCTAGTGATAAGACAATAAAGGCATTAAATAAGTTTAAAAACATATCCTCTTTGAAACCCTACTTTAAAAAAGCTAGA
GGTTACGCTGTTTTCCCAAATGTAGGAAAAGGAGGAATTGGAATCGGAGGAGCTAGAGGTAGTGGTGAGGTATTTGAAAA
AGGAAATGTTATTGGAAAAACCACCTTAACTCAAGTATCAATCGGCTTTCAATTAGGTGGACAAGCATTTAGCCAAATTA
TCTTTTTCAAAGATAAGAAATCTCTTGAGAGATTTACTGAAGGTAATTTTGAATTTGGGGCATCAGCTAGTGCAGCATTA
ATTTCAGAGGGAGCTAATGCATCTGCTGATTACAGTGATGGAGTTGCAGTTCTTACGTACTCAAAAGGAGGCCTTATGTA
TGAAGCAAGCATAGGAGGGCAAAAGTTTAGCTTTGAAGAATACTAA

Upstream 100 bases:

>100_bases
AGGATTCGAACCTGCGACCTACTGCTCCCAAAGCACCATGAGATGTGAAATTTCTTGATTAGGGTATATTATTTCTTATT
TAGTAATTAATTATTTGAAA

Downstream 100 bases:

>100_bases
AATTTAATAAATATTTTAATTTAATTATTAAAACAAGCCTAATAATAACTATTTGAGGGAAAGAATTTTTGAGGTAAATA
TTTTATTAGCTGAGACTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MTRKFFFVALLIFPQYLTSVQSSAFNESQLNKISDELLISGWKPLLDKNIKDKKASDKTIKALNKFKNISSLKPYFKKAR
GYAVFPNVGKGGIGIGGARGSGEVFEKGNVIGKTTLTQVSIGFQLGGQAFSQIIFFKDKKSLERFTEGNFEFGASASAAL
ISEGANASADYSDGVAVLTYSKGGLMYEASIGGQKFSFEEY

Sequences:

>Translated_201_residues
MTRKFFFVALLIFPQYLTSVQSSAFNESQLNKISDELLISGWKPLLDKNIKDKKASDKTIKALNKFKNISSLKPYFKKAR
GYAVFPNVGKGGIGIGGARGSGEVFEKGNVIGKTTLTQVSIGFQLGGQAFSQIIFFKDKKSLERFTEGNFEFGASASAAL
ISEGANASADYSDGVAVLTYSKGGLMYEASIGGQKFSFEEY
>Mature_200_residues
TRKFFFVALLIFPQYLTSVQSSAFNESQLNKISDELLISGWKPLLDKNIKDKKASDKTIKALNKFKNISSLKPYFKKARG
YAVFPNVGKGGIGIGGARGSGEVFEKGNVIGKTTLTQVSIGFQLGGQAFSQIIFFKDKKSLERFTEGNFEFGASASAALI
SEGANASADYSDGVAVLTYSKGGLMYEASIGGQKFSFEEY

Specific function: Unknown

COG id: COG2930

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21814; Mature: 21683

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRKFFFVALLIFPQYLTSVQSSAFNESQLNKISDELLISGWKPLLDKNIKDKKASDKTI
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHH
KALNKFKNISSLKPYFKKARGYAVFPNVGKGGIGIGGARGSGEVFEKGNVIGKTTLTQVS
HHHHHHHCHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCHHHCCCEECCCEEEEEE
IGFQLGGQAFSQIIFFKDKKSLERFTEGNFEFGASASAALISEGANASADYSDGVAVLTY
ECHHCCHHHHHHHHEECCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEE
SKGGLMYEASIGGQKFSFEEY
CCCCEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
TRKFFFVALLIFPQYLTSVQSSAFNESQLNKISDELLISGWKPLLDKNIKDKKASDKTI
CCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHH
KALNKFKNISSLKPYFKKARGYAVFPNVGKGGIGIGGARGSGEVFEKGNVIGKTTLTQVS
HHHHHHHCHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCHHHCCCEECCCEEEEEE
IGFQLGGQAFSQIIFFKDKKSLERFTEGNFEFGASASAALISEGANASADYSDGVAVLTY
ECHHCCHHHHHHHHEECCHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCEEEEEE
SKGGLMYEASIGGQKFSFEEY
CCCCEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA