Click here to switch to the map view.

The map label for this gene is 78779523

Identifier: 78779523

GI number: 78779523

Start: 1055543

End: 1056022

Strand: Reverse

Name: 78779523

Synonym: PMT9312_1140

Alternate gene names: NA

Gene position: 1056022-1055543 (Counterclockwise)

Preceding gene: 78779524

Following gene: 78779522

Centisome position: 61.78

GC content: 31.04

Gene sequence:

>480_bases
ATGAAACGCTTACTACTCCTACTACTAGCTGCTCTTGCTTTACCAGCTGCAGTTAATGCTGAAAAAAATATTTTTTATAG
TACGAAGGAAGATCTTATGACAGATATCACCAAAGTGAATATTGATCTTTTATCAGAGACGACTGTATTAAATTCCATAG
GCCAAGAAGCACAAGCAAGAATAGGAATACGTTGTAATGGAAATAAATTGAATACTTATATAAAAACTCCAACATACAAT
GCTGATAATTTAGAGGTTCAATTAAGGTGGGATAAAAATGAACCGAAAATTGCATATTGGAATTATTCAGTTGATGGAAC
TGCATACTTTCCATACCCACGCGTAACTGATAATGAGCTTAAATTTCATAAATCATTTATAAAAAACATGAGAAATCATG
AATCCTTAGTTTTTGGATGGAGTCCATATTCAACTGCTAAAAAGGCTGTAAAATTTGATCTAAAAAAATTAAAGATTTAA

Upstream 100 bases:

>100_bases
ATTATCCAGATGCAGAATCATTTTTAGAATCAATTGATTGTGAATATATAATTGGCGTTTTAGACATTTGTTGGGCTAAT
GCTTGTACAAATAATAAAAA

Downstream 100 bases:

>100_bases
ATTATATAAGTTCTAAGCTAATACCATCAATGGTTACAAACTTGTAAGAGAAATTATTTACGCATGAAAAACTTATGGAC
TAAAAGAAACATTATGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 159

Protein sequence:

>159_residues
MKRLLLLLLAALALPAAVNAEKNIFYSTKEDLMTDITKVNIDLLSETTVLNSIGQEAQARIGIRCNGNKLNTYIKTPTYN
ADNLEVQLRWDKNEPKIAYWNYSVDGTAYFPYPRVTDNELKFHKSFIKNMRNHESLVFGWSPYSTAKKAVKFDLKKLKI

Sequences:

>Translated_159_residues
MKRLLLLLLAALALPAAVNAEKNIFYSTKEDLMTDITKVNIDLLSETTVLNSIGQEAQARIGIRCNGNKLNTYIKTPTYN
ADNLEVQLRWDKNEPKIAYWNYSVDGTAYFPYPRVTDNELKFHKSFIKNMRNHESLVFGWSPYSTAKKAVKFDLKKLKI
>Mature_159_residues
MKRLLLLLLAALALPAAVNAEKNIFYSTKEDLMTDITKVNIDLLSETTVLNSIGQEAQARIGIRCNGNKLNTYIKTPTYN
ADNLEVQLRWDKNEPKIAYWNYSVDGTAYFPYPRVTDNELKFHKSFIKNMRNHESLVFGWSPYSTAKKAVKFDLKKLKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18263; Mature: 18263

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLLLLLAALALPAAVNAEKNIFYSTKEDLMTDITKVNIDLLSETTVLNSIGQEAQAR
CHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHE
IGIRCNGNKLNTYIKTPTYNADNLEVQLRWDKNEPKIAYWNYSVDGTAYFPYPRVTDNEL
EEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEECCCCCCCCCHH
KFHKSFIKNMRNHESLVFGWSPYSTAKKAVKFDLKKLKI
HHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRLLLLLLAALALPAAVNAEKNIFYSTKEDLMTDITKVNIDLLSETTVLNSIGQEAQAR
CHHHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHE
IGIRCNGNKLNTYIKTPTYNADNLEVQLRWDKNEPKIAYWNYSVDGTAYFPYPRVTDNEL
EEEEECCCEEEEEEECCCCCCCCEEEEEEECCCCCEEEEEEEECCCEEECCCCCCCCCHH
KFHKSFIKNMRNHESLVFGWSPYSTAKKAVKFDLKKLKI
HHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA