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The map label for this gene is 78779500

Identifier: 78779500

GI number: 78779500

Start: 1035299

End: 1035616

Strand: Reverse

Name: 78779500

Synonym: PMT9312_1117

Alternate gene names: NA

Gene position: 1035616-1035299 (Counterclockwise)

Preceding gene: 161350032

Following gene: 78779499

Centisome position: 60.59

GC content: 32.08

Gene sequence:

>318_bases
ATGACAACATACTTTTTCGTCGCGGCAAGTGAAAAGTTTTTAACTGTTGAAGAACCAATTGAGGAGATTTTGAAAGAGAG
GATGAGGAACTATAAAGAAAATAATAAAGAAATAGATTTTTGGCTTTTAAAAAATCCATCCTTTTTGCAAACCAACCAAT
TTATTGATCTAAAAGCAAAGATTCCATCACCCCCAGCAGCTATTTTATCGACGGATAAAAAATTTATAACTTTCTTAAAG
CTGCGTTTAGAATTTGTTGCTGTTGGGGAATTCGAATTTCCTAATGCAGAAATAACTGATCCATTTAAAGTTGAGTAA

Upstream 100 bases:

>100_bases
TGAACATAGGTCATAGTATTGTTGCAAGGGCTTTAGCGATAGGATTAGAAAAGTCTGTACGTGAAATGAAGTCCCTTATT
ACATCAAATTAAATTTCAAA

Downstream 100 bases:

>100_bases
TATAACCAATCATTAAATTGCTCAATCTATATAAGTCAAACAAAATTGAAGTAATTAGTGAGCTTTTGGCAGAAGAATTA
AAAATATGTCCTCCTCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTTYFFVAASEKFLTVEEPIEEILKERMRNYKENNKEIDFWLLKNPSFLQTNQFIDLKAKIPSPPAAILSTDKKFITFLK
LRLEFVAVGEFEFPNAEITDPFKVE

Sequences:

>Translated_105_residues
MTTYFFVAASEKFLTVEEPIEEILKERMRNYKENNKEIDFWLLKNPSFLQTNQFIDLKAKIPSPPAAILSTDKKFITFLK
LRLEFVAVGEFEFPNAEITDPFKVE
>Mature_104_residues
TTYFFVAASEKFLTVEEPIEEILKERMRNYKENNKEIDFWLLKNPSFLQTNQFIDLKAKIPSPPAAILSTDKKFITFLKL
RLEFVAVGEFEFPNAEITDPFKVE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ycf54 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019616 [H]

Pfam domain/function: PF10674 DUF2488 [H]

EC number: NA

Molecular weight: Translated: 12340; Mature: 12209

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTYFFVAASEKFLTVEEPIEEILKERMRNYKENNKEIDFWLLKNPSFLQTNQFIDLKAK
CCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCEEEEEEE
IPSPPAAILSTDKKFITFLKLRLEFVAVGEFEFPNAEITDPFKVE
CCCCCHHHHCCCHHHHHHHHHHEEEEEECCEECCCCCCCCCEECC
>Mature Secondary Structure 
TTYFFVAASEKFLTVEEPIEEILKERMRNYKENNKEIDFWLLKNPSFLQTNQFIDLKAK
CEEEEEEECCCEEEHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEECCCEEEEEEE
IPSPPAAILSTDKKFITFLKLRLEFVAVGEFEFPNAEITDPFKVE
CCCCCHHHHCCCHHHHHHHHHHEEEEEECCEECCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]