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The map label for this gene is ureC

Identifier: 78779220

GI number: 78779220

Start: 771880

End: 773589

Strand: Direct

Name: ureC

Synonym: PMT9312_0836

Alternate gene names: 78779220

Gene position: 771880-773589 (Clockwise)

Preceding gene: 78779219

Following gene: 78779222

Centisome position: 45.16

GC content: 36.78

Gene sequence:

>1710_bases
ATGTCCTATAAAATTGACAGAAATACTTATGCTCAAACTTACGGGCCCACTACTGGGGATAGAGTAAGGCTTGCTGATAC
CGAACTATTTATTGAAGTAGAAAAGGATTTAACTACTTATGGAGATGAAGTTAAATTTGGAGGAGGAAAAGTTATTCGAG
ATGGGATGGGACAGTCTCAAGTAACAAGAGAAGATGGAGCTGTAGATACCGTAATAACTAATGCTTTGATCATGGACTGG
TGGGGAATAATTAAGGCTGATGTGGGAATTAAAGATGGAAAGATTTTTGAAATTGGTAAGGCTGGTAATCCTGATATTCA
GGATAATGTCGATATTGTTATAGGTGCCTCAACAGAAGTAATAGCTGGAGAAGGTCATATTCTTACTGCAGGGGCAATAG
ATACCCATATTCACTTTATCTGTCCCCAACAAATTGAGACAGCACTTGCTTCAGGAATTACAACTATGTTGGGAGGAGGA
ACTGGACCCGCAACTGGCACAAATGCAACAACCTGTACCCCAGGTTCTTTTCATATTTCTCGAATGCTTCAATCTGCAGA
AGCATTTCCAATGAATTTAGGTTTTTTTGGTAAAGGAAATTCAACAAATGGAAGAAATCTTATTGATCAAGTTGAAGCTG
GTGCATGTGGATTGAAACTTCATGAGGATTGGGGAACGACTCCATCCACCATAAATTCTTGTTTAAATGTTGCAGATAAA
TTTGATGTTCAAGTTTGTATTCACACTGATACGTTAAATGAGGCAGGCTTTGTTGAGGATACCATCAAGGCTATTGCAGG
AAGAACAATTCATACTTTTCATACCGAAGGTGCAGGTGGAGGACATGCGCCAGATATTATTAAAATTTGTGGTGAAAAAA
ATGTTCTTCCTAGTAGTACTAATCCAACAAGACCCTATACGACGAACACTTTAGAGGAACATCTCGACATGCTAATGGTT
TGTCATCATTTAGATTCCAAAATTCCAGAAGATATAGCATTTGCGGAATCAAGGATCAGAAGAGAGACTATTGCTGCGGA
AGATATCCTACATGATATGGGCGCCTTCTCAATTATCGCTAGTGACTCTCAAGCTATGGGAAGAGTGGGTGAAGTAATAA
CAAGAACTTTCCAAACTGCTCATAAAATGAAATTACAAAGAGGTCCGCTATCACAAGATTCTGATAGGAATGATAATTAC
AGAGTTAAGAGATATATTTCTAAAGTTACAATTAACCCTGCAATAGCTCATGGTATTAACAAATATGTTGGGTCCATAGA
AAAGGGAAAAATTGCAGACTTAGTATTTTGGAAACCTTCATTTTTTGCAGTAAAGCCTGAATTAGTTGTTAAAGGGGGAT
CTATAGTTTGGTCCCAAATGGGTGATGCAAATGCTTCAATTCCTACTCCAGGACCTGTTCATGGAAGACCTATGTTTGCA
AATTTCGGCCAATCCTTAATTAATAGTTCTTTCACTTTTTTAAGTAAAAATTCAATTGATCAAAATATTCCAAAAAAATT
AGGATTACAAAAGAATTGTATTGCTGTAGAAAACACAAGAAGTATCAATAAATCACATTTAAAACTTAATAGTAAACTGC
CAAATATTTCAGTTGATCCAGAAACTTACGAAGTATTTTCCGATGGAGAACTTCTTACTTGTGAGCCACTTAATGAAGTT
CCAATGGCGCAGAGGTATTTTTTGCTTTAG

Upstream 100 bases:

>100_bases
CCTGGAGATACAACAGATGTCAAATTAGTTTCATATTCAGGTTTAAAAAATGCCTATGGTTTTAATTCATTAGTTAACGG
TTCTTTAGATACTTAAAATT

Downstream 100 bases:

>100_bases
AAGTTTTTAATTAATTCTTTTTCACTTGCCTTTATGTCTTTTGACCCTGCGATAGCTAGATCCTCTTGCAGTTTGTTTTC
ACAAGATAGAACTCTCGACC

Product: urease subunit alpha

Products: NA

Alternate protein names: Urea amidohydrolase subunit alpha [H]

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MSYKIDRNTYAQTYGPTTGDRVRLADTELFIEVEKDLTTYGDEVKFGGGKVIRDGMGQSQVTREDGAVDTVITNALIMDW
WGIIKADVGIKDGKIFEIGKAGNPDIQDNVDIVIGASTEVIAGEGHILTAGAIDTHIHFICPQQIETALASGITTMLGGG
TGPATGTNATTCTPGSFHISRMLQSAEAFPMNLGFFGKGNSTNGRNLIDQVEAGACGLKLHEDWGTTPSTINSCLNVADK
FDVQVCIHTDTLNEAGFVEDTIKAIAGRTIHTFHTEGAGGGHAPDIIKICGEKNVLPSSTNPTRPYTTNTLEEHLDMLMV
CHHLDSKIPEDIAFAESRIRRETIAAEDILHDMGAFSIIASDSQAMGRVGEVITRTFQTAHKMKLQRGPLSQDSDRNDNY
RVKRYISKVTINPAIAHGINKYVGSIEKGKIADLVFWKPSFFAVKPELVVKGGSIVWSQMGDANASIPTPGPVHGRPMFA
NFGQSLINSSFTFLSKNSIDQNIPKKLGLQKNCIAVENTRSINKSHLKLNSKLPNISVDPETYEVFSDGELLTCEPLNEV
PMAQRYFLL

Sequences:

>Translated_569_residues
MSYKIDRNTYAQTYGPTTGDRVRLADTELFIEVEKDLTTYGDEVKFGGGKVIRDGMGQSQVTREDGAVDTVITNALIMDW
WGIIKADVGIKDGKIFEIGKAGNPDIQDNVDIVIGASTEVIAGEGHILTAGAIDTHIHFICPQQIETALASGITTMLGGG
TGPATGTNATTCTPGSFHISRMLQSAEAFPMNLGFFGKGNSTNGRNLIDQVEAGACGLKLHEDWGTTPSTINSCLNVADK
FDVQVCIHTDTLNEAGFVEDTIKAIAGRTIHTFHTEGAGGGHAPDIIKICGEKNVLPSSTNPTRPYTTNTLEEHLDMLMV
CHHLDSKIPEDIAFAESRIRRETIAAEDILHDMGAFSIIASDSQAMGRVGEVITRTFQTAHKMKLQRGPLSQDSDRNDNY
RVKRYISKVTINPAIAHGINKYVGSIEKGKIADLVFWKPSFFAVKPELVVKGGSIVWSQMGDANASIPTPGPVHGRPMFA
NFGQSLINSSFTFLSKNSIDQNIPKKLGLQKNCIAVENTRSINKSHLKLNSKLPNISVDPETYEVFSDGELLTCEPLNEV
PMAQRYFLL
>Mature_568_residues
SYKIDRNTYAQTYGPTTGDRVRLADTELFIEVEKDLTTYGDEVKFGGGKVIRDGMGQSQVTREDGAVDTVITNALIMDWW
GIIKADVGIKDGKIFEIGKAGNPDIQDNVDIVIGASTEVIAGEGHILTAGAIDTHIHFICPQQIETALASGITTMLGGGT
GPATGTNATTCTPGSFHISRMLQSAEAFPMNLGFFGKGNSTNGRNLIDQVEAGACGLKLHEDWGTTPSTINSCLNVADKF
DVQVCIHTDTLNEAGFVEDTIKAIAGRTIHTFHTEGAGGGHAPDIIKICGEKNVLPSSTNPTRPYTTNTLEEHLDMLMVC
HHLDSKIPEDIAFAESRIRRETIAAEDILHDMGAFSIIASDSQAMGRVGEVITRTFQTAHKMKLQRGPLSQDSDRNDNYR
VKRYISKVTINPAIAHGINKYVGSIEKGKIADLVFWKPSFFAVKPELVVKGGSIVWSQMGDANASIPTPGPVHGRPMFAN
FGQSLINSSFTFLSKNSIDQNIPKKLGLQKNCIAVENTRSINKSHLKLNSKLPNISVDPETYEVFSDGELLTCEPLNEVP
MAQRYFLL

Specific function: Unknown

COG id: COG0804

COG function: function code E; Urea amidohydrolase (urease) alpha subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 urease domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006680
- InterPro:   IPR011059
- InterPro:   IPR011612
- InterPro:   IPR005848
- InterPro:   IPR017951
- InterPro:   IPR017950 [H]

Pfam domain/function: PF01979 Amidohydro_1; PF00449 Urease_alpha [H]

EC number: =3.5.1.5 [H]

Molecular weight: Translated: 61772; Mature: 61641

Theoretical pI: Translated: 5.95; Mature: 5.95

Prosite motif: PS01120 UREASE_1 ; PS00145 UREASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYKIDRNTYAQTYGPTTGDRVRLADTELFIEVEKDLTTYGDEVKFGGGKVIRDGMGQSQ
CCEECCCCCCHHCCCCCCCCEEEEECCEEEEEECCHHHCCCCEEEECCCEEEECCCCCCC
VTREDGAVDTVITNALIMDWWGIIKADVGIKDGKIFEIGKAGNPDIQDNVDIVIGASTEV
CCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCCEEEECCCEE
IAGEGHILTAGAIDTHIHFICPQQIETALASGITTMLGGGTGPATGTNATTCTPGSFHIS
EECCCCEEEECCEECEEEEECHHHHHHHHHHCHHHHHCCCCCCCCCCCCCEECCCHHHHH
RMLQSAEAFPMNLGFFGKGNSTNGRNLIDQVEAGACGLKLHEDWGTTPSTINSCLNVADK
HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCC
FDVQVCIHTDTLNEAGFVEDTIKAIAGRTIHTFHTEGAGGGHAPDIIKICGEKNVLPSST
CCEEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCC
NPTRPYTTNTLEEHLDMLMVCHHLDSKIPEDIAFAESRIRRETIAAEDILHDMGAFSIIA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
SDSQAMGRVGEVITRTFQTAHKMKLQRGPLSQDSDRNDNYRVKRYISKVTINPAIAHGIN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
KYVGSIEKGKIADLVFWKPSFFAVKPELVVKGGSIVWSQMGDANASIPTPGPVHGRPMFA
HHHCCCCCCCEEEEEEECCCEEEECCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHH
NFGQSLINSSFTFLSKNSIDQNIPKKLGLQKNCIAVENTRSINKSHLKLNSKLPNISVDP
HHHHHHHCCCCCEEECCCCCCCCHHHHCCCCCEEEECCCCCCCHHHEEECCCCCCCCCCC
ETYEVFSDGELLTCEPLNEVPMAQRYFLL
CCEEEECCCCEEEECCCCCCCCCHHHCCC
>Mature Secondary Structure 
SYKIDRNTYAQTYGPTTGDRVRLADTELFIEVEKDLTTYGDEVKFGGGKVIRDGMGQSQ
CEECCCCCCHHCCCCCCCCEEEEECCEEEEEECCHHHCCCCEEEECCCEEEECCCCCCC
VTREDGAVDTVITNALIMDWWGIIKADVGIKDGKIFEIGKAGNPDIQDNVDIVIGASTEV
CCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCEEEECCCCCCCCCCCCCEEEECCCEE
IAGEGHILTAGAIDTHIHFICPQQIETALASGITTMLGGGTGPATGTNATTCTPGSFHIS
EECCCCEEEECCEECEEEEECHHHHHHHHHHCHHHHHCCCCCCCCCCCCCEECCCHHHHH
RMLQSAEAFPMNLGFFGKGNSTNGRNLIDQVEAGACGLKLHEDWGTTPSTINSCLNVADK
HHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHCC
FDVQVCIHTDTLNEAGFVEDTIKAIAGRTIHTFHTEGAGGGHAPDIIKICGEKNVLPSST
CCEEEEEEECCCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHCCCCCCCCCCC
NPTRPYTTNTLEEHLDMLMVCHHLDSKIPEDIAFAESRIRRETIAAEDILHDMGAFSIIA
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
SDSQAMGRVGEVITRTFQTAHKMKLQRGPLSQDSDRNDNYRVKRYISKVTINPAIAHGIN
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHH
KYVGSIEKGKIADLVFWKPSFFAVKPELVVKGGSIVWSQMGDANASIPTPGPVHGRPMFA
HHHCCCCCCCEEEEEEECCCEEEECCEEEEECCCEEEECCCCCCCCCCCCCCCCCCCHHH
NFGQSLINSSFTFLSKNSIDQNIPKKLGLQKNCIAVENTRSINKSHLKLNSKLPNISVDP
HHHHHHHCCCCCEEECCCCCCCCHHHHCCCCCEEEECCCCCCCHHHEEECCCCCCCCCCC
ETYEVFSDGELLTCEPLNEVPMAQRYFLL
CCEEEECCCCEEEECCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA