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The map label for this gene is ureF [H]

Identifier: 78779215

GI number: 78779215

Start: 769120

End: 769806

Strand: Reverse

Name: ureF [H]

Synonym: PMT9312_0831

Alternate gene names: 78779215

Gene position: 769806-769120 (Counterclockwise)

Preceding gene: 78779216

Following gene: 78779214

Centisome position: 45.04

GC content: 28.38

Gene sequence:

>687_bases
ATGACTAAAAGTCACTTATTAAAATATTTATTAACAAGCCCTAATTTACCAGTTGGAGGATTTTGTTATTCGGAGGGAAT
GGAGAGTTATCTTCATAATAAAAATTTAAATGACTCAAATTCAGTAAAAGAATTAATCATTAGTGAATTAAAAATTGGAC
AGATAAGACTAGATGCAAAACTATTATTAGATTTTTTTGATATTTTCAATGAGATAAACGACGGCAAAAATGCAAAAAGT
AATTTGCAAAAGCTATTGAGTTTGAATAAATGGATCCTCTCATCAAAAGACTCTATCGAAATGAGAGAACAACAAACTCA
AATGGCAAAATCTCTCTTTGATTTAACAAAAGAATTTGGATTTGAATATCTATATGAAAATAATAAAAAAAGTTCTTGGC
CATTAGCGTGGAGTTGGGCTTGTTTTTGTTTTGAAATAACGAAGATAGAAATGGTTGAGAATTTTTTCTACGCGTGGAGT
GCAAATCAACTAAGTGCAGCATTAAGAATAATTCCTATCGGTTCAACAAAAACACAATTAATTCAGAGAGACTTATTAGC
AATAATTTCAAAAGTTTCTAAAGAAATTATGGACAAACAAATTGATGACATATATTTTGGCAATGTAGGTTTAGCTATGG
CACAACAAAATCATAATGACCTTTATACAAAACTTTTTAGAAATTAA

Upstream 100 bases:

>100_bases
ACAAAAAGTGATTATGTTATTGAAAACATGCTTAAAAATTTTAAGGTTGATATTGTAAATACCCAAAAAAAATTTTCTCC
TGAAAAAGGCGCACATAGTC

Downstream 100 bases:

>100_bases
TTTATGAGCAGTAAATTGAGGGTAGGAGTTGCTGGGCCTGTAGGTTCAGGAAAAACTGCATTATTAGAGACTCTATGCTT
AAGCCTGAAAAACAATTATG

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MTKSHLLKYLLTSPNLPVGGFCYSEGMESYLHNKNLNDSNSVKELIISELKIGQIRLDAKLLLDFFDIFNEINDGKNAKS
NLQKLLSLNKWILSSKDSIEMREQQTQMAKSLFDLTKEFGFEYLYENNKKSSWPLAWSWACFCFEITKIEMVENFFYAWS
ANQLSAALRIIPIGSTKTQLIQRDLLAIISKVSKEIMDKQIDDIYFGNVGLAMAQQNHNDLYTKLFRN

Sequences:

>Translated_228_residues
MTKSHLLKYLLTSPNLPVGGFCYSEGMESYLHNKNLNDSNSVKELIISELKIGQIRLDAKLLLDFFDIFNEINDGKNAKS
NLQKLLSLNKWILSSKDSIEMREQQTQMAKSLFDLTKEFGFEYLYENNKKSSWPLAWSWACFCFEITKIEMVENFFYAWS
ANQLSAALRIIPIGSTKTQLIQRDLLAIISKVSKEIMDKQIDDIYFGNVGLAMAQQNHNDLYTKLFRN
>Mature_227_residues
TKSHLLKYLLTSPNLPVGGFCYSEGMESYLHNKNLNDSNSVKELIISELKIGQIRLDAKLLLDFFDIFNEINDGKNAKSN
LQKLLSLNKWILSSKDSIEMREQQTQMAKSLFDLTKEFGFEYLYENNKKSSWPLAWSWACFCFEITKIEMVENFFYAWSA
NQLSAALRIIPIGSTKTQLIQRDLLAIISKVSKEIMDKQIDDIYFGNVGLAMAQQNHNDLYTKLFRN

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 26365; Mature: 26233

Theoretical pI: Translated: 7.43; Mature: 7.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKSHLLKYLLTSPNLPVGGFCYSEGMESYLHNKNLNDSNSVKELIISELKIGQIRLDAK
CCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEHHHH
LLLDFFDIFNEINDGKNAKSNLQKLLSLNKWILSSKDSIEMREQQTQMAKSLFDLTKEFG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
FEYLYENNKKSSWPLAWSWACFCFEITKIEMVENFFYAWSANQLSAALRIIPIGSTKTQL
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCHHHHH
IQRDLLAIISKVSKEIMDKQIDDIYFGNVGLAMAQQNHNDLYTKLFRN
HHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCHHHHHHHHCC
>Mature Secondary Structure 
TKSHLLKYLLTSPNLPVGGFCYSEGMESYLHNKNLNDSNSVKELIISELKIGQIRLDAK
CHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCEEHHHH
LLLDFFDIFNEINDGKNAKSNLQKLLSLNKWILSSKDSIEMREQQTQMAKSLFDLTKEFG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
FEYLYENNKKSSWPLAWSWACFCFEITKIEMVENFFYAWSANQLSAALRIIPIGSTKTQL
HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEEEEECCCHHHHH
IQRDLLAIISKVSKEIMDKQIDDIYFGNVGLAMAQQNHNDLYTKLFRN
HHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA