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The map label for this gene is typA [H]

Identifier: 78779154

GI number: 78779154

Start: 717561

End: 719357

Strand: Direct

Name: typA [H]

Synonym: PMT9312_0770

Alternate gene names: 78779154

Gene position: 717561-719357 (Clockwise)

Preceding gene: 78779153

Following gene: 78779155

Centisome position: 41.98

GC content: 35.23

Gene sequence:

>1797_bases
ATGTCATCTTCGATAAAAGAAATTAGGAATGTTGCAATTATTGCCCACGTAGATCATGGAAAGACAACTCTTGTGGATGC
ATTATTATCTCAATCAGGAATATTTAGAGACAATGAAGTTATTCCTACATGTGTAATGGATTCGAATGATCTTGAAAGAG
AAAGAGGAATAACAATACTCTCAAAAAATACTGCAGTTAATTATAAAGATACCAGAATTAATATTATAGATACTCCGGGA
CATGCTGATTTTGGAGGAGAAGTCGAGAGGGTTTTGGGAATGGTTGATGGTTGTTTGCTTATTGTTGATGCAAATGAGGG
ACCGATGCCACAAACCAGATTTGTTTTAAAAAAAGCATTAGAAAAAGGACTTAGGCCTATAGTTTTTGTAAATAAAATTG
ATAGACCAAGAGTAGTACCAGAAATAGCAATTGATAAGGTCCTTGATTTGTTTTTAGAATTAGGAGCAGATGATGATCAA
TGTGATTTTCCTTATCTTTTTGGTAGCGGCCTATCTGGTTTTGCAAAAGAAGAGATGGAATCTAATAGTGACAATATGAT
GCCTCTTTTTGAAGCTATAATCAGACATGTTCCACCTCCAGTAGGTGACTCAAATAAGCCTCTTCAACTACAAATAACTA
CTTTGGATTATTCTGATTTCTTAGGCAGAATTGTAATTGGAAAAATTCATAATGGAACTATAAGAAATGGTCAACAAGCT
AGCTTAATTAAAGAAAATGGAAAAACTATTAAAGGCAAGGTTAGTAAACTACTAGGCTTCGAGGGATTACAAAGAATTGA
TATAAATGAAGCATTCGCAGGCGATATTGTTGCTGTTTCTGGTTTCGATGACGTCAATATTGGTGAGACCATAGCATGTC
CCGATTCTCCTCATCCTCTTCCATTAATCAAAGTTGATGAACCTACCTTAAATATGACTTTTGTTGTCAATGATTCCCCA
TTTGCGGGTAAGGAAGGGAAATTTGTTACTAGTAGACAATTAAAAAATAGATTGGAGAGGGAACTTCTAACAAATGTTGC
CCTAAGGGTCGAAGAAACTGATTCGCCTGACAGGTTCTCAGTTTCAGGAAGAGGAGAATTACATTTAGGGATTTTGATTG
AAACTATGAGAAGAGAGGGTTTTGAGTTTCAAATCTCACAACCTCAAGTAATTTTTAGAGAAATTGATAATGTTGAATGT
GAGCCTATAGAGACTTTGGTTTTAGATGTGCCTGAAGTCTCTGTTGGTTCATGTATAGAGAAACTTGGATCTAGAAAGGC
AGAGATGAAAAACATGCAGACAAGTTCAGATGGAAGAACTCAATTAGAATTTCTTGTGCCATCAAGAGGATTAATTGGAT
TTCGTGGTGAATTTGTTCGGATGACGAGAGGTGAAGGTATCATGAGTCACTCTTTTTATGAATATAAACCTAAAACAGGA
GATTTTGAAACTAGGAGAAATGGAGTTCTTATAGCTTTTGAGGAAGGTGTGGCAACATTTTATGCTCTAAAGAATGCAGA
AGATAGGGGCGTTTATTTTATTAAACCAGGAGTTAAAGTTTATAAGGGAATGATCATTGGAGAGAATAATCGACCTCAGG
ATCTTGAGTTAAATATATGTAAAACTAAGCAGTTGACTAATATGAGGTCTGCAGGTGCAGAAGAACTTGATACTTTGCAG
TCACCTGTTGATATTACTCTTGAAAGAGCACTTGAATATATTGGCCCAGATGAAATGCTGGAGGTAACACCCGAATCAAT
AAGAATGAGAAAAATAAATAAGAAGAAAAAATATTAA

Upstream 100 bases:

>100_bases
TGATTATGTTTTTCAAAGTCTTAAAGAGAAAATTCTCATAATAAGCATTCTTTGAGTTAGCCTTAATTAAGTCAATCTAC
TATTCATATAAATTTTATAA

Downstream 100 bases:

>100_bases
TAATTAATTTTATGAATGAAGAAAGTACAAAAAGTTTTAAAGATTCCCTTTTTAATGCTTTAAATCTTTTTAATAATCAT
GAATGGTATGAGGCTCATGA

Product: tyrosine binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 598; Mature: 597

Protein sequence:

>598_residues
MSSSIKEIRNVAIIAHVDHGKTTLVDALLSQSGIFRDNEVIPTCVMDSNDLERERGITILSKNTAVNYKDTRINIIDTPG
HADFGGEVERVLGMVDGCLLIVDANEGPMPQTRFVLKKALEKGLRPIVFVNKIDRPRVVPEIAIDKVLDLFLELGADDDQ
CDFPYLFGSGLSGFAKEEMESNSDNMMPLFEAIIRHVPPPVGDSNKPLQLQITTLDYSDFLGRIVIGKIHNGTIRNGQQA
SLIKENGKTIKGKVSKLLGFEGLQRIDINEAFAGDIVAVSGFDDVNIGETIACPDSPHPLPLIKVDEPTLNMTFVVNDSP
FAGKEGKFVTSRQLKNRLERELLTNVALRVEETDSPDRFSVSGRGELHLGILIETMRREGFEFQISQPQVIFREIDNVEC
EPIETLVLDVPEVSVGSCIEKLGSRKAEMKNMQTSSDGRTQLEFLVPSRGLIGFRGEFVRMTRGEGIMSHSFYEYKPKTG
DFETRRNGVLIAFEEGVATFYALKNAEDRGVYFIKPGVKVYKGMIIGENNRPQDLELNICKTKQLTNMRSAGAEELDTLQ
SPVDITLERALEYIGPDEMLEVTPESIRMRKINKKKKY

Sequences:

>Translated_598_residues
MSSSIKEIRNVAIIAHVDHGKTTLVDALLSQSGIFRDNEVIPTCVMDSNDLERERGITILSKNTAVNYKDTRINIIDTPG
HADFGGEVERVLGMVDGCLLIVDANEGPMPQTRFVLKKALEKGLRPIVFVNKIDRPRVVPEIAIDKVLDLFLELGADDDQ
CDFPYLFGSGLSGFAKEEMESNSDNMMPLFEAIIRHVPPPVGDSNKPLQLQITTLDYSDFLGRIVIGKIHNGTIRNGQQA
SLIKENGKTIKGKVSKLLGFEGLQRIDINEAFAGDIVAVSGFDDVNIGETIACPDSPHPLPLIKVDEPTLNMTFVVNDSP
FAGKEGKFVTSRQLKNRLERELLTNVALRVEETDSPDRFSVSGRGELHLGILIETMRREGFEFQISQPQVIFREIDNVEC
EPIETLVLDVPEVSVGSCIEKLGSRKAEMKNMQTSSDGRTQLEFLVPSRGLIGFRGEFVRMTRGEGIMSHSFYEYKPKTG
DFETRRNGVLIAFEEGVATFYALKNAEDRGVYFIKPGVKVYKGMIIGENNRPQDLELNICKTKQLTNMRSAGAEELDTLQ
SPVDITLERALEYIGPDEMLEVTPESIRMRKINKKKKY
>Mature_597_residues
SSSIKEIRNVAIIAHVDHGKTTLVDALLSQSGIFRDNEVIPTCVMDSNDLERERGITILSKNTAVNYKDTRINIIDTPGH
ADFGGEVERVLGMVDGCLLIVDANEGPMPQTRFVLKKALEKGLRPIVFVNKIDRPRVVPEIAIDKVLDLFLELGADDDQC
DFPYLFGSGLSGFAKEEMESNSDNMMPLFEAIIRHVPPPVGDSNKPLQLQITTLDYSDFLGRIVIGKIHNGTIRNGQQAS
LIKENGKTIKGKVSKLLGFEGLQRIDINEAFAGDIVAVSGFDDVNIGETIACPDSPHPLPLIKVDEPTLNMTFVVNDSPF
AGKEGKFVTSRQLKNRLERELLTNVALRVEETDSPDRFSVSGRGELHLGILIETMRREGFEFQISQPQVIFREIDNVECE
PIETLVLDVPEVSVGSCIEKLGSRKAEMKNMQTSSDGRTQLEFLVPSRGLIGFRGEFVRMTRGEGIMSHSFYEYKPKTGD
FETRRNGVLIAFEEGVATFYALKNAEDRGVYFIKPGVKVYKGMIIGENNRPQDLELNICKTKQLTNMRSAGAEELDTLQS
PVDITLERALEYIGPDEMLEVTPESIRMRKINKKKKY

Specific function: Not known; probably interacts with the ribosomes in a GTP dependent manner [H]

COG id: COG1217

COG function: function code T; Predicted membrane GTPase involved in stress response

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding elongation factor family. TypA subfamily [H]

Homologues:

Organism=Homo sapiens, GI94966754, Length=132, Percent_Identity=45.4545454545455, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI157426893, Length=493, Percent_Identity=26.9776876267748, Blast_Score=125, Evalue=2e-28,
Organism=Homo sapiens, GI34147630, Length=299, Percent_Identity=30.1003344481605, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI18390331, Length=147, Percent_Identity=43.5374149659864, Blast_Score=107, Evalue=4e-23,
Organism=Homo sapiens, GI4503483, Length=144, Percent_Identity=38.1944444444444, Blast_Score=102, Evalue=1e-21,
Organism=Homo sapiens, GI25306287, Length=145, Percent_Identity=38.6206896551724, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI19923640, Length=145, Percent_Identity=38.6206896551724, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI25306283, Length=145, Percent_Identity=38.6206896551724, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI310132016, Length=110, Percent_Identity=43.6363636363636, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI310110807, Length=110, Percent_Identity=43.6363636363636, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI310123363, Length=110, Percent_Identity=43.6363636363636, Blast_Score=95, Evalue=2e-19,
Organism=Homo sapiens, GI217272894, Length=134, Percent_Identity=40.2985074626866, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI217272892, Length=134, Percent_Identity=40.2985074626866, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI94966752, Length=128, Percent_Identity=32.03125, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI53729339, Length=294, Percent_Identity=26.8707482993197, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI53729337, Length=294, Percent_Identity=26.8707482993197, Blast_Score=70, Evalue=5e-12,
Organism=Escherichia coli, GI48994988, Length=588, Percent_Identity=54.0816326530612, Blast_Score=642, Evalue=0.0,
Organism=Escherichia coli, GI1788922, Length=545, Percent_Identity=26.9724770642202, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI1789738, Length=143, Percent_Identity=41.2587412587413, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1790412, Length=298, Percent_Identity=28.1879194630872, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1789737, Length=298, Percent_Identity=28.1879194630872, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790835, Length=156, Percent_Identity=31.4102564102564, Blast_Score=83, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17557151, Length=233, Percent_Identity=34.3347639484979, Blast_Score=122, Evalue=8e-28,
Organism=Caenorhabditis elegans, GI17506493, Length=219, Percent_Identity=32.4200913242009, Blast_Score=108, Evalue=7e-24,
Organism=Caenorhabditis elegans, GI17556745, Length=143, Percent_Identity=39.8601398601399, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI71988811, Length=133, Percent_Identity=40.6015037593985, Blast_Score=105, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17533571, Length=147, Percent_Identity=45.578231292517, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI71988819, Length=133, Percent_Identity=40.6015037593985, Blast_Score=105, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI17556456, Length=285, Percent_Identity=28.7719298245614, Blast_Score=97, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17552882, Length=134, Percent_Identity=36.5671641791045, Blast_Score=87, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI32566629, Length=266, Percent_Identity=28.1954887218045, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI25141371, Length=275, Percent_Identity=26.5454545454545, Blast_Score=69, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI32566303, Length=263, Percent_Identity=27.7566539923954, Blast_Score=69, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6323320, Length=501, Percent_Identity=27.3453093812375, Blast_Score=130, Evalue=5e-31,
Organism=Saccharomyces cerevisiae, GI6324761, Length=274, Percent_Identity=30.2919708029197, Blast_Score=121, Evalue=3e-28,
Organism=Saccharomyces cerevisiae, GI6324707, Length=206, Percent_Identity=34.4660194174757, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6320593, Length=206, Percent_Identity=34.4660194174757, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6322359, Length=136, Percent_Identity=41.9117647058824, Blast_Score=98, Evalue=4e-21,
Organism=Saccharomyces cerevisiae, GI6323098, Length=153, Percent_Identity=39.2156862745098, Blast_Score=94, Evalue=8e-20,
Organism=Saccharomyces cerevisiae, GI6324166, Length=142, Percent_Identity=38.0281690140845, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI78706572, Length=527, Percent_Identity=25.2371916508539, Blast_Score=112, Evalue=6e-25,
Organism=Drosophila melanogaster, GI281363316, Length=303, Percent_Identity=29.7029702970297, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI17864358, Length=303, Percent_Identity=29.7029702970297, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28574573, Length=199, Percent_Identity=35.1758793969849, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24582462, Length=136, Percent_Identity=46.3235294117647, Blast_Score=107, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24585709, Length=152, Percent_Identity=40.1315789473684, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24585711, Length=152, Percent_Identity=40.1315789473684, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI24585713, Length=152, Percent_Identity=40.1315789473684, Blast_Score=106, Evalue=5e-23,
Organism=Drosophila melanogaster, GI19921738, Length=275, Percent_Identity=31.2727272727273, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI221458488, Length=137, Percent_Identity=42.3357664233577, Blast_Score=91, Evalue=3e-18,
Organism=Drosophila melanogaster, GI21357743, Length=190, Percent_Identity=35.2631578947368, Blast_Score=89, Evalue=1e-17,
Organism=Drosophila melanogaster, GI17137380, Length=267, Percent_Identity=26.5917602996255, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR000795
- InterPro:   IPR005225
- InterPro:   IPR000640
- InterPro:   IPR004161
- InterPro:   IPR009000
- InterPro:   IPR006298 [H]

Pfam domain/function: PF00679 EFG_C; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]

EC number: NA

Molecular weight: Translated: 66687; Mature: 66556

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: PS00301 EFACTOR_GTP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSSIKEIRNVAIIAHVDHGKTTLVDALLSQSGIFRDNEVIPTCVMDSNDLERERGITIL
CCCHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHCCEEEE
SKNTAVNYKDTRINIIDTPGHADFGGEVERVLGMVDGCLLIVDANEGPMPQTRFVLKKAL
ECCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH
EKGLRPIVFVNKIDRPRVVPEIAIDKVLDLFLELGADDDQCDFPYLFGSGLSGFAKEEME
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHH
SNSDNMMPLFEAIIRHVPPPVGDSNKPLQLQITTLDYSDFLGRIVIGKIHNGTIRNGQQA
CCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHCEEEEEEECCCCCCCCCHH
SLIKENGKTIKGKVSKLLGFEGLQRIDINEAFAGDIVAVSGFDDVNIGETIACPDSPHPL
HHHHHCCCEEHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCE
PLIKVDEPTLNMTFVVNDSPFAGKEGKFVTSRQLKNRLERELLTNVALRVEETDSPDRFS
EEEEECCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE
VSGRGELHLGILIETMRREGFEFQISQPQVIFREIDNVECEPIETLVLDVPEVSVGSCIE
ECCCCCEEEHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHH
KLGSRKAEMKNMQTSSDGRTQLEFLVPSRGLIGFRGEFVRMTRGEGIMSHSFYEYKPKTG
HHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCC
DFETRRNGVLIAFEEGVATFYALKNAEDRGVYFIKPGVKVYKGMIIGENNRPQDLELNIC
CCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEECCCHHEEEEEEECCCCCCCCEEEEEE
KTKQLTNMRSAGAEELDTLQSPVDITLERALEYIGPDEMLEVTPESIRMRKINKKKKY
CCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSSIKEIRNVAIIAHVDHGKTTLVDALLSQSGIFRDNEVIPTCVMDSNDLERERGITIL
CCHHHHHCCEEEEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCHHHCCEEEE
SKNTAVNYKDTRINIIDTPGHADFGGEVERVLGMVDGCLLIVDANEGPMPQTRFVLKKAL
ECCCEEEEECCEEEEEECCCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHH
EKGLRPIVFVNKIDRPRVVPEIAIDKVLDLFLELGADDDQCDFPYLFGSGLSGFAKEEME
HHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHH
SNSDNMMPLFEAIIRHVPPPVGDSNKPLQLQITTLDYSDFLGRIVIGKIHNGTIRNGQQA
CCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEEEEECHHHHHCEEEEEEECCCCCCCCCHH
SLIKENGKTIKGKVSKLLGFEGLQRIDINEAFAGDIVAVSGFDDVNIGETIACPDSPHPL
HHHHHCCCEEHHHHHHHHCCCCCEEECCCCCCCCCEEEECCCCCCCCCCEEECCCCCCCE
PLIKVDEPTLNMTFVVNDSPFAGKEGKFVTSRQLKNRLERELLTNVALRVEETDSPDRFS
EEEEECCCCEEEEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHEEEEECCCCCCEEE
VSGRGELHLGILIETMRREGFEFQISQPQVIFREIDNVECEPIETLVLDVPEVSVGSCIE
ECCCCCEEEHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHH
KLGSRKAEMKNMQTSSDGRTQLEFLVPSRGLIGFRGEFVRMTRGEGIMSHSFYEYKPKTG
HHCCCHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCEEEECCCCC
DFETRRNGVLIAFEEGVATFYALKNAEDRGVYFIKPGVKVYKGMIIGENNRPQDLELNIC
CCCCCCCCEEEEEECCCEEEEEECCCCCCCEEEECCCHHEEEEEEECCCCCCCCEEEEEE
KTKQLTNMRSAGAEELDTLQSPVDITLERALEYIGPDEMLEVTPESIRMRKINKKKKY
CCHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]