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The map label for this gene is pcyA

Identifier: 78779139

GI number: 78779139

Start: 700722

End: 701447

Strand: Direct

Name: pcyA

Synonym: PMT9312_0755

Alternate gene names: 78779139

Gene position: 700722-701447 (Clockwise)

Preceding gene: 78779136

Following gene: 78779140

Centisome position: 41.0

GC content: 28.93

Gene sequence:

>726_bases
TTGTTGTCTGAATCTTTAACTAAAACTAAATTAACAGACCCTCTAATTTTGGAATTGTTGCAAAATATTAGAGAGCATAG
ATCTATGCTTGAGGACCTTAAGAGTATTAAAGTTGATCCAGAACTTTCTAATATAATATCCAACGAAATAGGCAGAGAAC
TTTATATAGAAAACGAATTTCATAAAGCAAGAGGATTTAGAAAACTGCATATTGAAGTTGCAGAATTTTCAAAGAATCTT
AAAATTTTGCATTGCGTTTTTTTCCCTGATCCAAAGTTTGATATCCCAATTTTCGGAATGGATTTAGTAAAAATAAATGA
TATCGTTTCGGCTGCCATTGTTGATTTATCGCCGGCATCTCAAAATCAAGGTGTGAAATATGAAAAATTTCTTTCTAAAG
TTGATAAAAGTTCCTTCACCTCATTGAGAGAGATTCCTAAATGGGGTGAGATTTTTTCTGAAAATGTATTTTTTGCTTCT
TTAAAAAGTAAATCTGAGGAAAATGATTTTTGCAAAGTTGTGGATGAATACCTCTCTATTTTGATCAAATTAAGTAAAGA
AGCTAAACCAGAGTTTAAGGAGGAAATTATTAAAGAGAGAAAAAATTATCAAAAGAATTATTGCGTGCAACAAATGAAAA
ATGAAAAGACTAGTATGGTTCTTTTAAAATATTTTGATGAAAAATGGGTCAATAATTATATAAAAACAGTACTCTTTGAT
TTTTAA

Upstream 100 bases:

>100_bases
ACAAATACACATCTAGTTTTGCTTGAATGGGTATAGTAGTTAACCTCTCCTACATTCATTTAAATTCTCTCTTTAAACTC
TATTTTGGTACTTTTTACTC

Downstream 100 bases:

>100_bases
TGAAATTAAAAACATTTAAAAATTTTTTTATTTATTTTTTGTTATTCACACCATTATCTCTTGGAGTTATTTCCTGCTCT
AGCAATAATAAATCTAATTC

Product: phycocyanobilin:ferredoxin oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MLSESLTKTKLTDPLILELLQNIREHRSMLEDLKSIKVDPELSNIISNEIGRELYIENEFHKARGFRKLHIEVAEFSKNL
KILHCVFFPDPKFDIPIFGMDLVKINDIVSAAIVDLSPASQNQGVKYEKFLSKVDKSSFTSLREIPKWGEIFSENVFFAS
LKSKSEENDFCKVVDEYLSILIKLSKEAKPEFKEEIIKERKNYQKNYCVQQMKNEKTSMVLLKYFDEKWVNNYIKTVLFD
F

Sequences:

>Translated_241_residues
MLSESLTKTKLTDPLILELLQNIREHRSMLEDLKSIKVDPELSNIISNEIGRELYIENEFHKARGFRKLHIEVAEFSKNL
KILHCVFFPDPKFDIPIFGMDLVKINDIVSAAIVDLSPASQNQGVKYEKFLSKVDKSSFTSLREIPKWGEIFSENVFFAS
LKSKSEENDFCKVVDEYLSILIKLSKEAKPEFKEEIIKERKNYQKNYCVQQMKNEKTSMVLLKYFDEKWVNNYIKTVLFD
F
>Mature_241_residues
MLSESLTKTKLTDPLILELLQNIREHRSMLEDLKSIKVDPELSNIISNEIGRELYIENEFHKARGFRKLHIEVAEFSKNL
KILHCVFFPDPKFDIPIFGMDLVKINDIVSAAIVDLSPASQNQGVKYEKFLSKVDKSSFTSLREIPKWGEIFSENVFFAS
LKSKSEENDFCKVVDEYLSILIKLSKEAKPEFKEEIIKERKNYQKNYCVQQMKNEKTSMVLLKYFDEKWVNNYIKTVLFD
F

Specific function: Catalyzes the four-electron reduction of biliverdin IX- alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HY2 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PCYA_PROM9 (Q31BD0)

Other databases:

- EMBL:   CP000111
- RefSeq:   YP_397251.1
- HSSP:   Q55891
- ProteinModelPortal:   Q31BD0
- SMR:   Q31BD0
- STRING:   Q31BD0
- GeneID:   3765555
- GenomeReviews:   CP000111_GR
- KEGG:   pmi:PMT9312_0755
- eggNOG:   NOG27460
- HOGENOM:   HBG561233
- OMA:   NDKTRRV
- ProtClustDB:   PRK02816
- BioCyc:   PMAR74546:PMT9312_0755-MONOMER
- HAMAP:   MF_00618
- InterPro:   IPR009249
- InterPro:   IPR022870

Pfam domain/function: PF05996 Fe_bilin_red

EC number: =1.3.7.5

Molecular weight: Translated: 28265; Mature: 28265

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSESLTKTKLTDPLILELLQNIREHRSMLEDLKSIKVDPELSNIISNEIGRELYIENEF
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCHH
HKARGFRKLHIEVAEFSKNLKILHCVFFPDPKFDIPIFGMDLVKINDIVSAAIVDLSPAS
HHHCCHHHEEEEHHHHCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCC
QNQGVKYEKFLSKVDKSSFTSLREIPKWGEIFSENVFFASLKSKSEENDFCKVVDEYLSI
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHEEHHHCCCCCHHHHHHHHHHHHH
LIKLSKEAKPEFKEEIIKERKNYQKNYCVQQMKNEKTSMVLLKYFDEKWVNNYIKTVLFD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
F
C
>Mature Secondary Structure
MLSESLTKTKLTDPLILELLQNIREHRSMLEDLKSIKVDPELSNIISNEIGRELYIENEF
CCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCHH
HKARGFRKLHIEVAEFSKNLKILHCVFFPDPKFDIPIFGMDLVKINDIVSAAIVDLSPAS
HHHCCHHHEEEEHHHHCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHCCCCCC
QNQGVKYEKFLSKVDKSSFTSLREIPKWGEIFSENVFFASLKSKSEENDFCKVVDEYLSI
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCHHEEHHHCCCCCHHHHHHHHHHHHH
LIKLSKEAKPEFKEEIIKERKNYQKNYCVQQMKNEKTSMVLLKYFDEKWVNNYIKTVLFD
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA