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The map label for this gene is thf1 [H]

Identifier: 78779133

GI number: 78779133

Start: 694702

End: 695352

Strand: Reverse

Name: thf1 [H]

Synonym: PMT9312_0749

Alternate gene names: 78779133

Gene position: 695352-694702 (Counterclockwise)

Preceding gene: 78779135

Following gene: 78779131

Centisome position: 40.68

GC content: 25.96

Gene sequence:

>651_bases
TTGAGTCAACATACGCTAACCTTATTAAGGTTTACATATAAAAAATTGAAAGCAAAATTGACTGTTTCAGATAGCAAAAA
GTTATTTCATGAAGAATTTCCATACGTTATTCCAGGCTTATATAAAAGAATAGTTGATGAAATTCTTGTCGAACTAAATC
TTTTAAATCATCAAAATGAATTTAAACAAGATTATCTCTTTTGTATAGGTCTCACCGAAACATTCAAAGAATTAACGAAA
GGATACAAGCCTGAAAAACATTTGGATCTACTTTTTGAATCTTTATGCATTTCTACAAATTTTGAAGCGAAAGAAATTAA
GGAAATCTCCAAAATATCTCAAAAAGAATTTAGTGATAAGTCTTCAAAAGATATATTGAAATTATTAAAAGAAAAAAGCA
ATTCCAAACTTTATCCTTCAAGGATATTGAACTTAGGGATATATATATTAATTTCAAATTCTCAAGATTTCAAAGAAAAC
AATGATATTGAAAAAAATAAAATGATTTCTGATATTTTTGAGAAGTTAAGCTTATCTCGCAATAAAGCAGAAAAAGATAT
TGGAATTTACAAAAGCAGCATATCAAAAATGGAACAAGCAAAAGAGTTAATTCAAGAACAAAGAATAAAGGATAAGAAAA
AAACGCTATAA

Upstream 100 bases:

>100_bases
AATCTTGAATAGATATCAAAGACTCTTTCACTACCGCCAGATTCTTCTAAAACTAATGGGATCATAATAATATTTATTTG
TTTATTAGATATTAACGATA

Downstream 100 bases:

>100_bases
AATTAGTAACTATTTTTTCATTCTTTTTTTATCTTTCCAAGAGACATAAGAGATATAAATTACGGCGAATGTTATGAATA
TAAGTAAAACAAACGATGTT

Product: Thf1-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MSQHTLTLLRFTYKKLKAKLTVSDSKKLFHEEFPYVIPGLYKRIVDEILVELNLLNHQNEFKQDYLFCIGLTETFKELTK
GYKPEKHLDLLFESLCISTNFEAKEIKEISKISQKEFSDKSSKDILKLLKEKSNSKLYPSRILNLGIYILISNSQDFKEN
NDIEKNKMISDIFEKLSLSRNKAEKDIGIYKSSISKMEQAKELIQEQRIKDKKKTL

Sequences:

>Translated_216_residues
MSQHTLTLLRFTYKKLKAKLTVSDSKKLFHEEFPYVIPGLYKRIVDEILVELNLLNHQNEFKQDYLFCIGLTETFKELTK
GYKPEKHLDLLFESLCISTNFEAKEIKEISKISQKEFSDKSSKDILKLLKEKSNSKLYPSRILNLGIYILISNSQDFKEN
NDIEKNKMISDIFEKLSLSRNKAEKDIGIYKSSISKMEQAKELIQEQRIKDKKKTL
>Mature_215_residues
SQHTLTLLRFTYKKLKAKLTVSDSKKLFHEEFPYVIPGLYKRIVDEILVELNLLNHQNEFKQDYLFCIGLTETFKELTKG
YKPEKHLDLLFESLCISTNFEAKEIKEISKISQKEFSDKSSKDILKLLKEKSNSKLYPSRILNLGIYILISNSQDFKENN
DIEKNKMISDIFEKLSLSRNKAEKDIGIYKSSISKMEQAKELIQEQRIKDKKKTL

Specific function: May be involved in photosynthetic membrane biogenesis [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the THF1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017499 [H]

Pfam domain/function: PF11264 ThylakoidFormat [H]

EC number: NA

Molecular weight: Translated: 25367; Mature: 25236

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQHTLTLLRFTYKKLKAKLTVSDSKKLFHEEFPYVIPGLYKRIVDEILVELNLLNHQNE
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHH
FKQDYLFCIGLTETFKELTKGYKPEKHLDLLFESLCISTNFEAKEIKEISKISQKEFSDK
HHHHHHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
SSKDILKLLKEKSNSKLYPSRILNLGIYILISNSQDFKENNDIEKNKMISDIFEKLSLSR
CHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
NKAEKDIGIYKSSISKMEQAKELIQEQRIKDKKKTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQHTLTLLRFTYKKLKAKLTVSDSKKLFHEEFPYVIPGLYKRIVDEILVELNLLNHQNE
CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCHHH
FKQDYLFCIGLTETFKELTKGYKPEKHLDLLFESLCISTNFEAKEIKEISKISQKEFSDK
HHHHHHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
SSKDILKLLKEKSNSKLYPSRILNLGIYILISNSQDFKENNDIEKNKMISDIFEKLSLSR
CHHHHHHHHHHHCCCCCCHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
NKAEKDIGIYKSSISKMEQAKELIQEQRIKDKKKTL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA