| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is fur [H]
Identifier: 78779022
GI number: 78779022
Start: 600466
End: 600918
Strand: Direct
Name: fur [H]
Synonym: PMT9312_0637
Alternate gene names: 78779022
Gene position: 600466-600918 (Clockwise)
Preceding gene: 78779019
Following gene: 78779025
Centisome position: 35.13
GC content: 34.88
Gene sequence:
>453_bases TTGTCATTATCCTCGCAATACAATGTCATTACATCTCCTCTCGGCGATGGTTTACATAAAGAGGGGAAGAGGTTAACTCC TCAGAGGCTAAAGGTTCTTAATTTATTTGAAAATATTGGCTCTGGAAAGCATCTTAGTGCTGAAGAGGTTCATGAAAAGT TAGTTAAAACAAGCTCCAAAGTTTCACTAGCAACAATTTATAGAACTTTAAGACTTTTAGTACAAATGGGTTTGCTTCAT GAATTAGAACTCAGTGAGGGTGGACACAGATATGAATTGCTTAGTAATGACACACCGGATCATCATCATTTGATTTGTAT TAGGTGTGGAAGAACAGAAGAATTCGAAAATGACGAAGTTTTAGAAGCAGGCAAAGATGCAGCAAAAGTTAATGGTTTTA AACTAATTGAATCATCTTTAAATGTAAGAGCTATTTGTCCTAATTGTATTTAG
Upstream 100 bases:
>100_bases TTTAACATAATATTTTGAAGAACTTTAGTAAACATTTTAAATCAAAAAGTTGTTTTACTCTCATCTAGAGTTATTATTGA GAATAGCCATGAGTTAATAA
Downstream 100 bases:
>100_bases TGGGTTTTAACTTAAAGTCCCTCCACAACTTGACCCTGCACCTGCAGTGCAAGCAAAACAATGTTCTTTTACAGCTACCC GGTAGTCAAAAGTAAATGAT
Product: ferric uptake regulator family protein
Products: NA
Alternate protein names: Ferric uptake regulator [H]
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MSLSSQYNVITSPLGDGLHKEGKRLTPQRLKVLNLFENIGSGKHLSAEEVHEKLVKTSSKVSLATIYRTLRLLVQMGLLH ELELSEGGHRYELLSNDTPDHHHLICIRCGRTEEFENDEVLEAGKDAAKVNGFKLIESSLNVRAICPNCI
Sequences:
>Translated_150_residues MSLSSQYNVITSPLGDGLHKEGKRLTPQRLKVLNLFENIGSGKHLSAEEVHEKLVKTSSKVSLATIYRTLRLLVQMGLLH ELELSEGGHRYELLSNDTPDHHHLICIRCGRTEEFENDEVLEAGKDAAKVNGFKLIESSLNVRAICPNCI >Mature_149_residues SLSSQYNVITSPLGDGLHKEGKRLTPQRLKVLNLFENIGSGKHLSAEEVHEKLVKTSSKVSLATIYRTLRLLVQMGLLHE LELSEGGHRYELLSNDTPDHHHLICIRCGRTEEFENDEVLEAGKDAAKVNGFKLIESSLNVRAICPNCI
Specific function: Acts as a global negative controlling element, employing Fe(2+) as a cofactor to bind the operator of the repressed genes. Regulates genes involved in iron scavenging or photosynthetic electron transport [H]
COG id: COG0735
COG function: function code P; Fe2+/Zn2+ uptake regulation proteins
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fur family [H]
Homologues:
Organism=Escherichia coli, GI1786899, Length=133, Percent_Identity=30.8270676691729, Blast_Score=67, Evalue=6e-13,
Paralogues:
None
Copy number: 3432 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002481 [H]
Pfam domain/function: PF01475 FUR [H]
EC number: NA
Molecular weight: Translated: 16744; Mature: 16613
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSSQYNVITSPLGDGLHKEGKRLTPQRLKVLNLFENIGSGKHLSAEEVHEKLVKTSSK CCCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC VSLATIYRTLRLLVQMGLLHELELSEGGHRYELLSNDTPDHHHLICIRCGRTEEFENDEV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCHH LEAGKDAAKVNGFKLIESSLNVRAICPNCI HHCCCCHHHCCCHHHHHCCCCEEEECCCCC >Mature Secondary Structure SLSSQYNVITSPLGDGLHKEGKRLTPQRLKVLNLFENIGSGKHLSAEEVHEKLVKTSSK CCCCCCCEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC VSLATIYRTLRLLVQMGLLHELELSEGGHRYELLSNDTPDHHHLICIRCGRTEEFENDEV HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCHH LEAGKDAAKVNGFKLIESSLNVRAICPNCI HHCCCCHHHCCCHHHHHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8704986 [H]