| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778977
Identifier: 78778977
GI number: 78778977
Start: 554657
End: 555250
Strand: Direct
Name: 78778977
Synonym: PMT9312_0592
Alternate gene names: NA
Gene position: 554657-555250 (Clockwise)
Preceding gene: 78778976
Following gene: 78778985
Centisome position: 32.45
GC content: 26.43
Gene sequence:
>594_bases TTGGAAAAAAGAAATCCCATTATATTGATTCATGGTCTTTGGAATACTTCAAGTATTTTTTCTTCTATCACTTCAAAACT GGATGAAATTGGAATTGAATATTTTGCCCCAACTCTTAGTCATTCATATGGAATGACTTCAATTATTGATTTAACAAATA TATTAAACGGATTAATTTTAGAGAAATACGGTTTAGAAAAAGAAATAGATATTTTAGGATTTTCTATGGGAGGAATAATT GCTAGGTATTGGATTCAAAAATTTGATGGATATAAAAGAACAAGAAGATTAATATCTATAGGCTCCCCTCACAAAGGAAC ATTGATGGCTCAATTAGTACCTAAATACCCTTTTAGAGGAATATCAGAAATGAAAATAAATAGTAAGTTTCTTAAAGAAC TTGCAAACAATGATTTTTTTCTTAATGATATCGAGTGTATAAGTTTCTATACTTATTTGGATCTAATGGTTTTTCCTTCC TGGTGGACTAATTTAAATTTAGGAGAAAAAATATCAGTAAAAGTATATAAACATAGAAATTTAGTAAGAAATAAAGTTTC TGTTAATAAAATAATTGAGAAAATTATTATGTAG
Upstream 100 bases:
>100_bases TCACTAAAATTAAAATTATTTTGACAAAATGTAATCCTCCAATTACTGGTTTTGATGGGAAGGTGTCAATAGTCAGAATT CTTCAAAATAAGTAAAAGTT
Downstream 100 bases:
>100_bases TTCCAGACAAGCCCAAGTGTCTTATTAGGGGATCTGTTTGTGGCTCTCTCCCTCTGAATAGTTTGAATATTTCTAATGGA GATAAGCTTCCTCCTAAGCT
Product: lipase family protein
Products: diacylglycerol; carboxylate
Alternate protein names: Lipase; PGAP1 Family Protein; Lipase Superfamily; Alpha/Beta Fold Family Lipase; Alpha/Beta Hydrolase Fold Protein; Lipase-Like Protein; Lipase-Like
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MEKRNPIILIHGLWNTSSIFSSITSKLDEIGIEYFAPTLSHSYGMTSIIDLTNILNGLILEKYGLEKEIDILGFSMGGII ARYWIQKFDGYKRTRRLISIGSPHKGTLMAQLVPKYPFRGISEMKINSKFLKELANNDFFLNDIECISFYTYLDLMVFPS WWTNLNLGEKISVKVYKHRNLVRNKVSVNKIIEKIIM
Sequences:
>Translated_197_residues MEKRNPIILIHGLWNTSSIFSSITSKLDEIGIEYFAPTLSHSYGMTSIIDLTNILNGLILEKYGLEKEIDILGFSMGGII ARYWIQKFDGYKRTRRLISIGSPHKGTLMAQLVPKYPFRGISEMKINSKFLKELANNDFFLNDIECISFYTYLDLMVFPS WWTNLNLGEKISVKVYKHRNLVRNKVSVNKIIEKIIM >Mature_197_residues MEKRNPIILIHGLWNTSSIFSSITSKLDEIGIEYFAPTLSHSYGMTSIIDLTNILNGLILEKYGLEKEIDILGFSMGGII ARYWIQKFDGYKRTRRLISIGSPHKGTLMAQLVPKYPFRGISEMKINSKFLKELANNDFFLNDIECISFYTYLDLMVFPS WWTNLNLGEKISVKVYKHRNLVRNKVSVNKIIEKIIM
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.3
Molecular weight: Translated: 22792; Mature: 22792
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKRNPIILIHGLWNTSSIFSSITSKLDEIGIEYFAPTLSHSYGMTSIIDLTNILNGLIL CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EKYGLEKEIDILGFSMGGIIARYWIQKFDGYKRTRRLISIGSPHKGTLMAQLVPKYPFRG HHHCCCCCHHEEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC ISEMKINSKFLKELANNDFFLNDIECISFYTYLDLMVFPSWWTNLNLGEKISVKVYKHRN CHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEHHHHH LVRNKVSVNKIIEKIIM HHHHHHHHHHHHHHHCC >Mature Secondary Structure MEKRNPIILIHGLWNTSSIFSSITSKLDEIGIEYFAPTLSHSYGMTSIIDLTNILNGLIL CCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH EKYGLEKEIDILGFSMGGIIARYWIQKFDGYKRTRRLISIGSPHKGTLMAQLVPKYPFRG HHHCCCCCHHEEEECHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC ISEMKINSKFLKELANNDFFLNDIECISFYTYLDLMVFPSWWTNLNLGEKISVKVYKHRN CHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHCCCHHCCCCCCCEEEEEEHHHHH LVRNKVSVNKIIEKIIM HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: triacylglycerol; H2O
Specific reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA