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The map label for this gene is ndhL

Identifier: 78778955

GI number: 78778955

Start: 532887

End: 533120

Strand: Direct

Name: ndhL

Synonym: PMT9312_0570

Alternate gene names: 78778955

Gene position: 532887-533120 (Clockwise)

Preceding gene: 78778954

Following gene: 78778956

Centisome position: 31.18

GC content: 27.35

Gene sequence:

>234_bases
ATGGAAAGTTTTTTCAATAATTCATTCGCTACTTTAATTGCTTATATGGGAGTTATAACTATCTATTTATTGGTTATTCC
ATTATTACTATTTTACTGGATGAATAATAGGTGGCATGTTATGGGCAAATATGAAAGATTAGGAATTTATGGACTTGTAT
TTCTTTTCTTCCCAGGTTTAATTTTATTTTCTCCATTTTTAAATCTCAGATTAAAAGGAAGTGGTAAAGGTTAA

Upstream 100 bases:

>100_bases
GGTTCAAGTCCCCCCACTCCCATTATTTAATTATTTACTTTTAGTTCTGACGATAACTTCCAATAATTGTTATGTTTTAA
CTAAGCAACCATAAATCAAA

Downstream 100 bases:

>100_bases
AGAATTGACTAAAGGTAAAGTTATACAAATAGGTATATTTGTCTCATTAATAGGATTAATTAGCTATAAGATTACACCGC
AAATTGGTGTCGAAAATTTT

Product: NADH dehydrogenase subunit NdhL (ndhL)

Products: NAD+; ubiquinol

Alternate protein names: NAD(P)H dehydrogenase I subunit L; NDH-1 subunit L; NDH-L

Number of amino acids: Translated: 77; Mature: 77

Protein sequence:

>77_residues
MESFFNNSFATLIAYMGVITIYLLVIPLLLFYWMNNRWHVMGKYERLGIYGLVFLFFPGLILFSPFLNLRLKGSGKG

Sequences:

>Translated_77_residues
MESFFNNSFATLIAYMGVITIYLLVIPLLLFYWMNNRWHVMGKYERLGIYGLVFLFFPGLILFSPFLNLRLKGSGKG
>Mature_77_residues
MESFFNNSFATLIAYMGVITIYLLVIPLLLFYWMNNRWHVMGKYERLGIYGLVFLFFPGLILFSPFLNLRLKGSGKG

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhL subunit family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NDHL_PROM9 (Q31BW4)

Other databases:

- EMBL:   CP000111
- RefSeq:   YP_397067.1
- STRING:   Q31BW4
- GeneID:   3765370
- GenomeReviews:   CP000111_GR
- KEGG:   pmi:PMT9312_0570
- eggNOG:   NOG08765
- HOGENOM:   HBG711505
- OMA:   LLFYWMN
- ProtClustDB:   CLSK893123
- BioCyc:   PMAR74546:PMT9312_0570-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_01355
- InterPro:   IPR019654

Pfam domain/function: PF10716 NdhL

EC number: 1.6.5.3

Molecular weight: Translated: 8975; Mature: 8975

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x10cc83f8)-; HASH(0x10f2657c)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESFFNNSFATLIAYMGVITIYLLVIPLLLFYWMNNRWHVMGKYERLGIYGLVFLFFPGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH
ILFSPFLNLRLKGSGKG
HHHHHHHCEEECCCCCH
>Mature Secondary Structure
MESFFNNSFATLIAYMGVITIYLLVIPLLLFYWMNNRWHVMGKYERLGIYGLVFLFFPGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHH
ILFSPFLNLRLKGSGKG
HHHHHHHCEEECCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; H+; ubiquinone

Specific reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA