| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is chlB [H]
Identifier: 78778929
GI number: 78778929
Start: 508196
End: 509773
Strand: Reverse
Name: chlB [H]
Synonym: PMT9312_0544
Alternate gene names: 78778929
Gene position: 509773-508196 (Counterclockwise)
Preceding gene: 78778930
Following gene: 78778928
Centisome position: 29.83
GC content: 36.69
Gene sequence:
>1578_bases ATGGAATTAACTCTTTGGACATACGAAGGACCACCTCATGTAGGTGCAATGAGAGTGGCTTCATCAATGAAAGATATTCA TTACGTACTCCATGCTCCTCAAGGAGATACTTATGCAGATCTCCTTTTTACAATGATCGAGAGAAGAGGTCAGAGACCTC CTGTAACTTATACAACGTTTCAAGCTAGAGATTTAGGAGGAGATACAGCTGAATTAGTTAAAAGGAATATTACTGAGGCA GTTGAAAGATTTAAACCAAAAACCCTTTTAGTAGGAGAAAGTTGTACTGCTGAACTAATACAAGATCAGCCAGGTGCTCT TGCTAAGGGTATGGGTTTTGATATTCCAATTGTTAACCTTGAACTTCCTGCTTACAGCAAAAAAGAAAACTGGGGAGCTT CAGAAACCTTTTATCAAATAATTAGAACTCTTTTAAAAGATAAGGTAAATGAAATTGATAAAATCAACCCTCAAAGATGG AAGTCTTTAGGTCGAAGACCTAAAGTTAATATATTAGGTCCTACATTATTAGGATTTAGATGCAGAGATGATGTAATCGA AATTCAACGTATACTTTCAGAGCAAGGTATTGATACTAATGTTGTTGCACCACTGGGTTCAAGTCCAGAAGATATTGAGA GATTAATTGATGCTGATATTAATGTTTGCCTATATCATGAAATTGCTGAGATTTCTTGTGAATGGCTTAAACGTAATTGC GGAATGGAATATACCACTACTATTCCAATTGGTATAAAAAATACGATTAACTTTATTCATGAAGTTCATGAAAAGCTTGA CCTCCCTTTAACAAATAAAGGAGAGCTAGAGAACAAGTCAAAACTTCCATGGTATTCAAAGTCAGTTGATTCTAATTATT TGACGGGGAAAAGGGTTTTTATATTTGGTGACGGTACTCATGCTATCGCAGCGGCAAAAATTGCCAAAGATGAATTAGGC TTTGAAGTCGTAGGTCTAGGAACCTACAGCAGAGAAATGGCAAGACAAGTAAGAGCTGCCGCTAAGGATTTAAATATAGA AGCACTAATAACTAATAGCTACCTTGAAGTTGAAGATGCTATGAAAAAAGCGTCCCCTGAATTGGTCTTAGGAACTCAAA TGGAAAGGCATAGCGCAAAAAGGCTTGGAATTCCATGTTCAGTGATAAGTACCCCAATGCATGTCCAGGATGTTCCCGCT AGATATAGTCCTCAAATGGGATGGGAAGGAGCAAATGTGATTTTTGACGACTGGGTTCATCCTCTAATGATGGGATTAGA AGAGCATCTTATTGATATGTTTAAACATGACTTCGAGTTTGTTGACGGTCATCAAAGTCATCTAGGACATACTGCGACAA ATGCTCCTGATAATAAAGAAACTAAGCAAGCGCAAAGTAATATGAATATTCAAGAAAAAAGTATTCTTTGGACAGAATCT GGGAAAGCAGAACTTACAAAAGTACCATTTTTTGTGAGAGGTAAAGTTAAATCAAATACAGAGAAATATGCTCTCTCTAA AGGTCTTCCTGAAATTAATGATGAGACCCTCTACGACGCAAAAGCATTTTTTGGTTAA
Upstream 100 bases:
>100_bases CACGGAATTGATCAAGCAGCTGACTTGGCTGGACTTTTCTCAAGGCCTTTAAAAAGGAATCAAATACTTACATCCAAAAC ATTAGCGACTCATTAAAATT
Downstream 100 bases:
>100_bases TTATTACAAATAAAATATTATCTAGGCATGAGTATTTTCACTCATATAATAAATAAAAAAGCCTAGAATATCTAGTTATA AACATATATCTTGTATCTTT
Product: light-independent protochlorophyllide reductase subunit B
Products: NA
Alternate protein names: DPOR subunit B; LI-POR subunit B [H]
Number of amino acids: Translated: 525; Mature: 525
Protein sequence:
>525_residues MELTLWTYEGPPHVGAMRVASSMKDIHYVLHAPQGDTYADLLFTMIERRGQRPPVTYTTFQARDLGGDTAELVKRNITEA VERFKPKTLLVGESCTAELIQDQPGALAKGMGFDIPIVNLELPAYSKKENWGASETFYQIIRTLLKDKVNEIDKINPQRW KSLGRRPKVNILGPTLLGFRCRDDVIEIQRILSEQGIDTNVVAPLGSSPEDIERLIDADINVCLYHEIAEISCEWLKRNC GMEYTTTIPIGIKNTINFIHEVHEKLDLPLTNKGELENKSKLPWYSKSVDSNYLTGKRVFIFGDGTHAIAAAKIAKDELG FEVVGLGTYSREMARQVRAAAKDLNIEALITNSYLEVEDAMKKASPELVLGTQMERHSAKRLGIPCSVISTPMHVQDVPA RYSPQMGWEGANVIFDDWVHPLMMGLEEHLIDMFKHDFEFVDGHQSHLGHTATNAPDNKETKQAQSNMNIQEKSILWTES GKAELTKVPFFVRGKVKSNTEKYALSKGLPEINDETLYDAKAFFG
Sequences:
>Translated_525_residues MELTLWTYEGPPHVGAMRVASSMKDIHYVLHAPQGDTYADLLFTMIERRGQRPPVTYTTFQARDLGGDTAELVKRNITEA VERFKPKTLLVGESCTAELIQDQPGALAKGMGFDIPIVNLELPAYSKKENWGASETFYQIIRTLLKDKVNEIDKINPQRW KSLGRRPKVNILGPTLLGFRCRDDVIEIQRILSEQGIDTNVVAPLGSSPEDIERLIDADINVCLYHEIAEISCEWLKRNC GMEYTTTIPIGIKNTINFIHEVHEKLDLPLTNKGELENKSKLPWYSKSVDSNYLTGKRVFIFGDGTHAIAAAKIAKDELG FEVVGLGTYSREMARQVRAAAKDLNIEALITNSYLEVEDAMKKASPELVLGTQMERHSAKRLGIPCSVISTPMHVQDVPA RYSPQMGWEGANVIFDDWVHPLMMGLEEHLIDMFKHDFEFVDGHQSHLGHTATNAPDNKETKQAQSNMNIQEKSILWTES GKAELTKVPFFVRGKVKSNTEKYALSKGLPEINDETLYDAKAFFG >Mature_525_residues MELTLWTYEGPPHVGAMRVASSMKDIHYVLHAPQGDTYADLLFTMIERRGQRPPVTYTTFQARDLGGDTAELVKRNITEA VERFKPKTLLVGESCTAELIQDQPGALAKGMGFDIPIVNLELPAYSKKENWGASETFYQIIRTLLKDKVNEIDKINPQRW KSLGRRPKVNILGPTLLGFRCRDDVIEIQRILSEQGIDTNVVAPLGSSPEDIERLIDADINVCLYHEIAEISCEWLKRNC GMEYTTTIPIGIKNTINFIHEVHEKLDLPLTNKGELENKSKLPWYSKSVDSNYLTGKRVFIFGDGTHAIAAAKIAKDELG FEVVGLGTYSREMARQVRAAAKDLNIEALITNSYLEVEDAMKKASPELVLGTQMERHSAKRLGIPCSVISTPMHVQDVPA RYSPQMGWEGANVIFDDWVHPLMMGLEEHLIDMFKHDFEFVDGHQSHLGHTATNAPDNKETKQAQSNMNIQEKSILWTES GKAELTKVPFFVRGKVKSNTEKYALSKGLPEINDETLYDAKAFFG
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent [H]
COG id: COG2710
COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ChlB/BchB/BchZ family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000510 - InterPro: IPR013580 - InterPro: IPR005969 - InterPro: IPR016209 [H]
Pfam domain/function: PF00148 Oxidored_nitro; PF08369 PCP_red [H]
EC number: 1.18.-.-
Molecular weight: Translated: 59022; Mature: 59022
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELTLWTYEGPPHVGAMRVASSMKDIHYVLHAPQGDTYADLLFTMIERRGQRPPVTYTTF CEEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEE QARDLGGDTAELVKRNITEAVERFKPKTLLVGESCTAELIQDQPGALAKGMGFDIPIVNL ECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCHHCCCCCCCEEEEE ELPAYSKKENWGASETFYQIIRTLLKDKVNEIDKINPQRWKSLGRRPKVNILGPTLLGFR ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCHHCCEE CRDDVIEIQRILSEQGIDTNVVAPLGSSPEDIERLIDADINVCLYHEIAEISCEWLKRNC CHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHC GMEYTTTIPIGIKNTINFIHEVHEKLDLPLTNKGELENKSKLPWYSKSVDSNYLTGKRVF CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE IFGDGTHAIAAAKIAKDELGFEVVGLGTYSREMARQVRAAAKDLNIEALITNSYLEVEDA EEECCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH MKKASPELVLGTQMERHSAKRLGIPCSVISTPMHVQDVPARYSPQMGWEGANVIFDDWVH HHHCCCCEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHH PLMMGLEEHLIDMFKHDFEFVDGHQSHLGHTATNAPDNKETKQAQSNMNIQEKSILWTES HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCHHEEEEECC GKAELTKVPFFVRGKVKSNTEKYALSKGLPEINDETLYDAKAFFG CCCEEEECCEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCC >Mature Secondary Structure MELTLWTYEGPPHVGAMRVASSMKDIHYVLHAPQGDTYADLLFTMIERRGQRPPVTYTTF CEEEEEEECCCCCHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEEE QARDLGGDTAELVKRNITEAVERFKPKTLLVGESCTAELIQDQPGALAKGMGFDIPIVNL ECCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHCCCCCHHCCCCCCCEEEEE ELPAYSKKENWGASETFYQIIRTLLKDKVNEIDKINPQRWKSLGRRPKVNILGPTLLGFR ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCHHCCEE CRDDVIEIQRILSEQGIDTNVVAPLGSSPEDIERLIDADINVCLYHEIAEISCEWLKRNC CHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHC GMEYTTTIPIGIKNTINFIHEVHEKLDLPLTNKGELENKSKLPWYSKSVDSNYLTGKRVF CCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE IFGDGTHAIAAAKIAKDELGFEVVGLGTYSREMARQVRAAAKDLNIEALITNSYLEVEDA EEECCCHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHH MKKASPELVLGTQMERHSAKRLGIPCSVISTPMHVQDVPARYSPQMGWEGANVIFDDWVH HHHCCCCEEECCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEHHHHHH PLMMGLEEHLIDMFKHDFEFVDGHQSHLGHTATNAPDNKETKQAQSNMNIQEKSILWTES HHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHCCCCCHHEEEEECC GKAELTKVPFFVRGKVKSNTEKYALSKGLPEINDETLYDAKAFFG CCCEEEECCEEEECCCCCCCHHHHHHCCCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA