| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is chlL
Identifier: 78778928
GI number: 78778928
Start: 507116
End: 508003
Strand: Reverse
Name: chlL
Synonym: PMT9312_0543
Alternate gene names: 78778928
Gene position: 508003-507116 (Counterclockwise)
Preceding gene: 78778929
Following gene: 78778924
Centisome position: 29.72
GC content: 36.26
Gene sequence:
>888_bases ATGACAAGTACTATAAATAAACCTCTTGATGGGGAAGGGAGTGTTCAAGTAAAGCAAGATCCAAAAATAAATATCGAAGA AGGAGCTTTAGTTATTGCCGTGTACGGCAAGGGTGGCATAGGAAAATCAACTACATCATCAAACCTTTCTGCAGCATTCT CAAAATTAGGGAAAAAGGTTCTACAAATTGGATGTGATCCGAAACACGATAGCACTTTCACTTTGACGCACAAAATGGTT CCTACAGTTATCGATATTCTCGAAGAAGTAGATTTTCATAGCGAAGAATTGAGACCAACCGATTTCATGTTTGAAGGCTT TAATGGCGTAATGTGCGTCGAAAGTGGAGGCCCTCCTGCTGGTACAGGATGCGGGGGATATGTAACTGGTCAGACAGTTA AGCTTTTAAAAGAACATCACTTATTAGAAGATACAGATGTTGTTATTTTTGATGTTCTTGGGGACGTGGTTTGCGGTGGC TTTGCAGCTCCATTGCAACATGCAAATTACTGTCTAATTGTAACTGCCAATGACTTCGATTCAATTTTCGCTATGAATAG AATAGTCTCTGCAATTAAAGCAAAAGCAAAAAATTATAAAGTCAGACTAGGCGGCGTAGTAGCAAATCGATCAAAAGATA CAGACCAAATTGATAAATTCAATGAAAGAACAGGTTTAAAAACTATGGCTCATTTTAAAGATGTAGATGCTATCAGAAGA TCAAGACTAAAGAAATGTACCATCTTTGAAATGGAACCAACTGAAGACGTAATTGAAGTTCAAAATGAATATTTATCTCT TGCTAAAAATATGCTTGAAAACGTAGAACCTTTAGAAGGAAATCCACTTAAAGATAGAGAAATTTTTGATTTATTAGGAT TTGATTAG
Upstream 100 bases:
>100_bases GTATCTTTAATCTTAATAAATAACTATTTGTTGAGAAATGAATTCTATGAGGCATATACCTGCAAGAATATAAGTATTAA CGTGTAAATTCCAGCTTTAA
Downstream 100 bases:
>100_bases TCTTAATTAATTTAATCCGACCAATTTTTTTGTTAAATCATAAGTTTGTTGAGAAGTCTTAGTATCAATTATTCTTTTTG ACAACTTTTGAGAAAAAGCT
Product: protochlorophyllide reductase iron-sulfur ATP-binding protein
Products: NA
Alternate protein names: DPOR subunit L; LI-POR subunit L [H]
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MTSTINKPLDGEGSVQVKQDPKINIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHDSTFTLTHKMV PTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGG FAAPLQHANYCLIVTANDFDSIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNERTGLKTMAHFKDVDAIRR SRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGNPLKDREIFDLLGFD
Sequences:
>Translated_295_residues MTSTINKPLDGEGSVQVKQDPKINIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHDSTFTLTHKMV PTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGG FAAPLQHANYCLIVTANDFDSIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNERTGLKTMAHFKDVDAIRR SRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGNPLKDREIFDLLGFD >Mature_294_residues TSTINKPLDGEGSVQVKQDPKINIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKVLQIGCDPKHDSTFTLTHKMVP TVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPAGTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGF AAPLQHANYCLIVTANDFDSIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNERTGLKTMAHFKDVDAIRRS RLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGNPLKDREIFDLLGFD
Specific function: Uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent [H]
COG id: COG1348
COG function: function code P; Nitrogenase subunit NifH (ATPase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NifH/BchL/ChlL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000392 - InterPro: IPR005971 [H]
Pfam domain/function: PF00142 Fer4_NifH [H]
EC number: 1.18.-.-
Molecular weight: Translated: 32320; Mature: 32189
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: PS00746 NIFH_FRXC_1 ; PS00692 NIFH_FRXC_2 ; PS51026 NIFH_FRXC_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTINKPLDGEGSVQVKQDPKINIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKV CCCCCCCCCCCCCCEEECCCCCEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LQIGCDPKHDSTFTLTHKMVPTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPA HHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHCCCCHHEECCCCCEEEEECCCCCC GTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGFAAPLQHANYCLIVTANDFD CCCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHHHCCCCEEEEEECCCHH SIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNERTGLKTMAHFKDVDAIRR HHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH SRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGNPLKDREIFDLLGFD HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCC >Mature Secondary Structure TSTINKPLDGEGSVQVKQDPKINIEEGALVIAVYGKGGIGKSTTSSNLSAAFSKLGKKV CCCCCCCCCCCCCEEECCCCCEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH LQIGCDPKHDSTFTLTHKMVPTVIDILEEVDFHSEELRPTDFMFEGFNGVMCVESGGPPA HHHCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCHHHCCCCHHEECCCCCEEEEECCCCCC GTGCGGYVTGQTVKLLKEHHLLEDTDVVIFDVLGDVVCGGFAAPLQHANYCLIVTANDFD CCCCCCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHCCHHHHHCCCCEEEEEECCCHH SIFAMNRIVSAIKAKAKNYKVRLGGVVANRSKDTDQIDKFNERTGLKTMAHFKDVDAIRR HHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH SRLKKCTIFEMEPTEDVIEVQNEYLSLAKNMLENVEPLEGNPLKDREIFDLLGFD HHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA