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The map label for this gene is yqhM [H]

Identifier: 78778924

GI number: 78778924

Start: 504693

End: 505379

Strand: Reverse

Name: yqhM [H]

Synonym: PMT9312_0539

Alternate gene names: 78778924

Gene position: 505379-504693 (Counterclockwise)

Preceding gene: 78778928

Following gene: 78778922

Centisome position: 29.57

GC content: 30.42

Gene sequence:

>687_bases
TTGGGAATAGAAAATCAAGCTTTAATTTTTTCAACAAATAATTTACCTGGATTTGATCAAATGGCTTTAGATTTAAATTC
TTTAAATCAGACAATTTCTAATCCTGAAATCATTTTCACATTAAGATTCTACTATTGGACTGGGGATTGGCTTTCAATTG
GCTATCACCAAAAGGAAATTCCTCCTCATTGGGAAAAATTATTATTTAATAAGGAAATTAACATTGTAAGACGTCCCTCT
GGAGGGGGAGCTGTTTTGCATTCGGGAGGAATAACATATGCATTAACATTTAAAAAAAGTCACTATAAAATACTAAGTTA
TGAACTGGTTAACAAATGGTTAATTAAGAGTTTTCGAGAATTAGGTCTAAAGTTACAAAATGGCAAATTACGAAAATCGC
CAATAGCAACTAATTGTTTTGGGAGTAAATTAATTTCTGATTTAGTTGATCAGGATGGGTTCAAGAGAGTAGGAAGTGCA
CAATATCGAAAAAAAGGTGCCTTCCTTCAGCATGGAGAGATTCAAACAAATCCCTCAAAAGATTTATGGTTAAAATTATT
TCAAGAAGAAGCTCCACCTAAATTAAATCTAGATCTTACAAATGATGAAATAGTTCATCATTTAAGAAATTCATTCCTAG
AGAATAAATCTAATATAAGATTCAAAAATGTTGCCATTGATAATTAA

Upstream 100 bases:

>100_bases
AGGGAATTTGACACACTATTACAAAATGATGTTACGTAATTAATAAATTGAAAGAAAAAATTTATTAAAAATTATTATAA
ATAGACCAGCAAATTTAATT

Downstream 100 bases:

>100_bases
AATATTGAAAATTTTCATGACACCAATTCTTAAAGATCTCCTTTCTGCTTCATTAAATTAACTATTCTTGGCAATTCAAT
TCCCAAAGGATACTGATTTT

Product: protein ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MGIENQALIFSTNNLPGFDQMALDLNSLNQTISNPEIIFTLRFYYWTGDWLSIGYHQKEIPPHWEKLLFNKEINIVRRPS
GGGAVLHSGGITYALTFKKSHYKILSYELVNKWLIKSFRELGLKLQNGKLRKSPIATNCFGSKLISDLVDQDGFKRVGSA
QYRKKGAFLQHGEIQTNPSKDLWLKLFQEEAPPKLNLDLTNDEIVHHLRNSFLENKSNIRFKNVAIDN

Sequences:

>Translated_228_residues
MGIENQALIFSTNNLPGFDQMALDLNSLNQTISNPEIIFTLRFYYWTGDWLSIGYHQKEIPPHWEKLLFNKEINIVRRPS
GGGAVLHSGGITYALTFKKSHYKILSYELVNKWLIKSFRELGLKLQNGKLRKSPIATNCFGSKLISDLVDQDGFKRVGSA
QYRKKGAFLQHGEIQTNPSKDLWLKLFQEEAPPKLNLDLTNDEIVHHLRNSFLENKSNIRFKNVAIDN
>Mature_227_residues
GIENQALIFSTNNLPGFDQMALDLNSLNQTISNPEIIFTLRFYYWTGDWLSIGYHQKEIPPHWEKLLFNKEINIVRRPSG
GGAVLHSGGITYALTFKKSHYKILSYELVNKWLIKSFRELGLKLQNGKLRKSPIATNCFGSKLISDLVDQDGFKRVGSAQ
YRKKGAFLQHGEIQTNPSKDLWLKLFQEEAPPKLNLDLTNDEIVHHLRNSFLENKSNIRFKNVAIDN

Specific function: Unknown

COG id: COG0095

COG function: function code H; Lipoate-protein ligase A

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004143 [H]

Pfam domain/function: PF03099 BPL_LipA_LipB [H]

EC number: NA

Molecular weight: Translated: 26191; Mature: 26060

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIENQALIFSTNNLPGFDQMALDLNSLNQTISNPEIIFTLRFYYWTGDWLSIGYHQKEI
CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCC
PPHWEKLLFNKEINIVRRPSGGGAVLHSGGITYALTFKKSHYKILSYELVNKWLIKSFRE
CCHHHHHHHCCCCCEEECCCCCCEEEECCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHH
LGLKLQNGKLRKSPIATNCFGSKLISDLVDQDGFKRVGSAQYRKKGAFLQHGEIQTNPSK
HCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCEECCCCCCCCCH
DLWLKLFQEEAPPKLNLDLTNDEIVHHLRNSFLENKSNIRFKNVAIDN
HHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEEEECC
>Mature Secondary Structure 
GIENQALIFSTNNLPGFDQMALDLNSLNQTISNPEIIFTLRFYYWTGDWLSIGYHQKEI
CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCEEEECCCCCCC
PPHWEKLLFNKEINIVRRPSGGGAVLHSGGITYALTFKKSHYKILSYELVNKWLIKSFRE
CCHHHHHHHCCCCCEEECCCCCCEEEECCCEEEEEEEECCCEEEHHHHHHHHHHHHHHHH
LGLKLQNGKLRKSPIATNCFGSKLISDLVDQDGFKRVGSAQYRKKGAFLQHGEIQTNPSK
HCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHCCCCEECCCCCCCCCH
DLWLKLFQEEAPPKLNLDLTNDEIVHHLRNSFLENKSNIRFKNVAIDN
HHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]