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The map label for this gene is 78778896

Identifier: 78778896

GI number: 78778896

Start: 478265

End: 478522

Strand: Direct

Name: 78778896

Synonym: PMT9312_0511

Alternate gene names: NA

Gene position: 478265-478522 (Clockwise)

Preceding gene: 78778895

Following gene: 78778897

Centisome position: 27.98

GC content: 28.68

Gene sequence:

>258_bases
TTGAGTTATACAAAATCAAAGCACTTTATAAAAAGTAAATCAAGCGAAGAATCTTCTCTTAAATCTACTTTAAGTGATTT
TGAAAGAGATGATGATGATGACCCCTTAAGTATAAGGAGTTTATGTATAACATCTCTAGGTATTATTTTTGCCTTTATGA
TATTTTTATTACCTTCAATCGGCATTTTAATTGGAAGACCTTTCTCTCAAGGGAAAGAGGTAATTATTAATCACGATTTT
AAAAAAGATGGATCTTAG

Upstream 100 bases:

>100_bases
ATAATTAAGAAGTCAATAAACAATGTTTTGATTTATTGACATTTAGAATGTAGGATAATTATGTTCAATTATCTCCTTAA
CCTTTACCAATTAAGAGTTC

Downstream 100 bases:

>100_bases
TTCGATACCTCCATCTCCAATGAAGGGAATAGTAAATATTGTTGTTGAAATACCTGCAGGAAGTAGGAATAAGTATGAAT
ATTGTTCTGAGGCAGGAATA

Product: reverse transcriptase (RNA-dependent)-like

Products: NA

Alternate protein names: Reverse Transcriptase-Like; Reverse Transcriptase

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MSYTKSKHFIKSKSSEESSLKSTLSDFERDDDDDPLSIRSLCITSLGIIFAFMIFLLPSIGILIGRPFSQGKEVIINHDF
KKDGS

Sequences:

>Translated_85_residues
MSYTKSKHFIKSKSSEESSLKSTLSDFERDDDDDPLSIRSLCITSLGIIFAFMIFLLPSIGILIGRPFSQGKEVIINHDF
KKDGS
>Mature_84_residues
SYTKSKHFIKSKSSEESSLKSTLSDFERDDDDDPLSIRSLCITSLGIIFAFMIFLLPSIGILIGRPFSQGKEVIINHDFK
KDGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9531; Mature: 9400

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYTKSKHFIKSKSSEESSLKSTLSDFERDDDDDPLSIRSLCITSLGIIFAFMIFLLPSI
CCCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GILIGRPFSQGKEVIINHDFKKDGS
HHHHCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
SYTKSKHFIKSKSSEESSLKSTLSDFERDDDDDPLSIRSLCITSLGIIFAFMIFLLPSI
CCCCCHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GILIGRPFSQGKEVIINHDFKKDGS
HHHHCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA