Click here to switch to the map view.

The map label for this gene is 78778874

Identifier: 78778874

GI number: 78778874

Start: 457084

End: 458040

Strand: Direct

Name: 78778874

Synonym: PMT9312_0489

Alternate gene names: NA

Gene position: 457084-458040 (Clockwise)

Preceding gene: 78778873

Following gene: 78778879

Centisome position: 26.74

GC content: 25.91

Gene sequence:

>957_bases
ATGAGATTTAATATAAGGAGTCATAAATATTGGAAATTCCTTAAAAAAGTTAATTTTGATGGTTTAAAGAGTCTTTTCTT
TATTTCAAGCTTGTTATATTTTTGCATCTATTTTTTTAATAATTTTGATCAAATTTCTTTTGATATCAATTTTAAAAAAA
GTGTAATTAATCTATCTTTATCATTTTTATTTTGTGTTTTAAGTATTTACCTTAACGCTTATGCATGGAAATATATAGTT
AAATGGTTCGGAGAAGAATTTAAAAGTAATAATCTAGTTTCTTTTTATGTTTTAACCAATATTCTTAAATACGTTCCAGG
GGGTATTTGGCATTTTGTTGAAAGATTTAACTTTATAAAAAAAATAAGTAATCCTCAGATTGCTTTATATTCGACACTTA
TAGAACCTTATTTTATGTTGAGTGGAGCTTTTCTGTTGGCTTCACTGGGAGTAATTTTTTCACCACTTTACTTTTTTTTA
ATTTTGCCTTTAATATTTTTAAATAAGAAATTTATTTATGTTGTATTAAAAAGATTAGGGTCTATAAAGGGGAAAGTATT
TGAGGTTTTGAGATTTGCAAATTCAAAGGACCAATTTGAAAAGAGAATAAATATAATTTCTTTTTTTCCTGCCAAAGCGT
TATTACTTGAAATTGGTTTTGTTTTATCTAAATTTACTGGTTTTTATATCTGTCTAAATACTTTTTATTCAAGTAATACT
CTCAACATCATATTTTTATTAGTAATCTTTTCTTTGTCATGGTCTTTAGGTTTGGTAGTCCCATCAGCTCCAGGGGGAGT
TGGCGTTTTTGAAGCTTGTCTCCTTTTTTTTGTTAGCAGAAATATTCCACAAAATACAATTATTGTTAGCTTAATTTATT
TTAGGGTTATATCTACCTCGGCAGATTTGTTATTAAGCTTCCCTTTTTTAATTAGAAAGCTGTTTAAAAGAATTTAG

Upstream 100 bases:

>100_bases
AAGTCATGAGATTAAAACTAGAGCATAAAATATCAACTGAGGAAATAAGAAAAATAATAAAAGAGTCAAGTAAAGAATTT
AAAGCATTTGAAAATTGGAA

Downstream 100 bases:

>100_bases
TTTTTTTTCTCTAAACTTGGAATCAATGTAATTGATGCAATGAGACCTAAAGTCATGATAAGAATGGCTGGTAATATTGC
CTCTACCATTCTTTCATCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MRFNIRSHKYWKFLKKVNFDGLKSLFFISSLLYFCIYFFNNFDQISFDINFKKSVINLSLSFLFCVLSIYLNAYAWKYIV
KWFGEEFKSNNLVSFYVLTNILKYVPGGIWHFVERFNFIKKISNPQIALYSTLIEPYFMLSGAFLLASLGVIFSPLYFFL
ILPLIFLNKKFIYVVLKRLGSIKGKVFEVLRFANSKDQFEKRINIISFFPAKALLLEIGFVLSKFTGFYICLNTFYSSNT
LNIIFLLVIFSLSWSLGLVVPSAPGGVGVFEACLLFFVSRNIPQNTIIVSLIYFRVISTSADLLLSFPFLIRKLFKRI

Sequences:

>Translated_318_residues
MRFNIRSHKYWKFLKKVNFDGLKSLFFISSLLYFCIYFFNNFDQISFDINFKKSVINLSLSFLFCVLSIYLNAYAWKYIV
KWFGEEFKSNNLVSFYVLTNILKYVPGGIWHFVERFNFIKKISNPQIALYSTLIEPYFMLSGAFLLASLGVIFSPLYFFL
ILPLIFLNKKFIYVVLKRLGSIKGKVFEVLRFANSKDQFEKRINIISFFPAKALLLEIGFVLSKFTGFYICLNTFYSSNT
LNIIFLLVIFSLSWSLGLVVPSAPGGVGVFEACLLFFVSRNIPQNTIIVSLIYFRVISTSADLLLSFPFLIRKLFKRI
>Mature_318_residues
MRFNIRSHKYWKFLKKVNFDGLKSLFFISSLLYFCIYFFNNFDQISFDINFKKSVINLSLSFLFCVLSIYLNAYAWKYIV
KWFGEEFKSNNLVSFYVLTNILKYVPGGIWHFVERFNFIKKISNPQIALYSTLIEPYFMLSGAFLLASLGVIFSPLYFFL
ILPLIFLNKKFIYVVLKRLGSIKGKVFEVLRFANSKDQFEKRINIISFFPAKALLLEIGFVLSKFTGFYICLNTFYSSNT
LNIIFLLVIFSLSWSLGLVVPSAPGGVGVFEACLLFFVSRNIPQNTIIVSLIYFRVISTSADLLLSFPFLIRKLFKRI

Specific function: Unknown

COG id: COG0392

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37056; Mature: 37056

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFNIRSHKYWKFLKKVNFDGLKSLFFISSLLYFCIYFFNNFDQISFDINFKKSVINLSL
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHH
SFLFCVLSIYLNAYAWKYIVKWFGEEFKSNNLVSFYVLTNILKYVPGGIWHFVERFNFIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
KISNPQIALYSTLIEPYFMLSGAFLLASLGVIFSPLYFFLILPLIFLNKKFIYVVLKRLG
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
SIKGKVFEVLRFANSKDQFEKRINIISFFPAKALLLEIGFVLSKFTGFYICLNTFYSSNT
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LNIIFLLVIFSLSWSLGLVVPSAPGGVGVFEACLLFFVSRNIPQNTIIVSLIYFRVISTS
HHHHHHHHHHHHCCHHCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
ADLLLSFPFLIRKLFKRI
HHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MRFNIRSHKYWKFLKKVNFDGLKSLFFISSLLYFCIYFFNNFDQISFDINFKKSVINLSL
CCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHH
SFLFCVLSIYLNAYAWKYIVKWFGEEFKSNNLVSFYVLTNILKYVPGGIWHFVERFNFIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHH
KISNPQIALYSTLIEPYFMLSGAFLLASLGVIFSPLYFFLILPLIFLNKKFIYVVLKRLG
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
SIKGKVFEVLRFANSKDQFEKRINIISFFPAKALLLEIGFVLSKFTGFYICLNTFYSSNT
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LNIIFLLVIFSLSWSLGLVVPSAPGGVGVFEACLLFFVSRNIPQNTIIVSLIYFRVISTS
HHHHHHHHHHHHCCHHCEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCC
ADLLLSFPFLIRKLFKRI
HHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA