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The map label for this gene is tatC [C]

Identifier: 78778849

GI number: 78778849

Start: 437495

End: 438211

Strand: Reverse

Name: tatC [C]

Synonym: PMT9312_0464

Alternate gene names: 78778849

Gene position: 438211-437495 (Counterclockwise)

Preceding gene: 78778850

Following gene: 78778847

Centisome position: 25.64

GC content: 30.4

Gene sequence:

>717_bases
ATGACTTTTAGTGATCACTTAGAGGAACTTCGTCAAAGAATACTAAACTCAATTTACTCAATACTTATTTCAATATTCTT
AAGTTTTCTAATAATAAAGCCATTAATATCTTTTTTAGAAATTCCAGCTGGTGATATTCATTTATTACAACTTGCTCCAG
GAGAGTTTTTATTTGTCGCTATTAAAGTTGCAGGTTACAGCGGATTAATAGTTTCTATGCCTTATATTTTTTATCAAATA
ATATTGTTCATTTCCCCTGGATTAACAAAACAAGAAAAAAGCCTTATCTTGCCCGCAGTTTTTGGTTCAGGTCTTCTGTT
TTTTTTAGGATTAATTTTTTCATGGTGGATATTAGTTCCTGCAGCCATAAATTTCTTTATTACTTTCGGTGCTGACATTG
TTGAACCAACATGGTCAATAGAGAGATATTTTGATTTCGTTCTTTTATTAATGTCTAGCACTGCATTAGCTTTTCAATTA
CCAGTATTACAATTTATTCTTGGTTCTCTTGGAATAATTACTACAGAGAAAATGATTTCAAATTGGAAAATAGTTGTAAT
CTCCTCTGCAATCTTATCTGCAATTATCACACCTTCAACAGACCCATTGACAATGTCATTGCTATCTATATCAATTGTGT
TTTTATTTTTTGTCGGTACTGGATTAACTTACTTATCAGAAAATCTCAAGTCAAAAACTCTTTCATCTTCTCATTAA

Upstream 100 bases:

>100_bases
TGGACTTTGGCAAGATTAATTTTAAACCTTTTTCTTAAAAAATCTTTATCAAACAATAATGAAAGGTACAGGTCAGAGTG
AAAATAAATTTTTAGATACG

Downstream 100 bases:

>100_bases
CATTTAATTGCAAGCTGACAGCTCTACCTAACCTTGGCCTAGCATTGACTTTCTTTAGCCATTCCCTTACTTCCTCTGAG
TATCCACCTCTATTTAAAAT

Product: protein secretion component, Tat family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 237

Protein sequence:

>238_residues
MTFSDHLEELRQRILNSIYSILISIFLSFLIIKPLISFLEIPAGDIHLLQLAPGEFLFVAIKVAGYSGLIVSMPYIFYQI
ILFISPGLTKQEKSLILPAVFGSGLLFFLGLIFSWWILVPAAINFFITFGADIVEPTWSIERYFDFVLLLMSSTALAFQL
PVLQFILGSLGIITTEKMISNWKIVVISSAILSAIITPSTDPLTMSLLSISIVFLFFVGTGLTYLSENLKSKTLSSSH

Sequences:

>Translated_238_residues
MTFSDHLEELRQRILNSIYSILISIFLSFLIIKPLISFLEIPAGDIHLLQLAPGEFLFVAIKVAGYSGLIVSMPYIFYQI
ILFISPGLTKQEKSLILPAVFGSGLLFFLGLIFSWWILVPAAINFFITFGADIVEPTWSIERYFDFVLLLMSSTALAFQL
PVLQFILGSLGIITTEKMISNWKIVVISSAILSAIITPSTDPLTMSLLSISIVFLFFVGTGLTYLSENLKSKTLSSSH
>Mature_237_residues
TFSDHLEELRQRILNSIYSILISIFLSFLIIKPLISFLEIPAGDIHLLQLAPGEFLFVAIKVAGYSGLIVSMPYIFYQII
LFISPGLTKQEKSLILPAVFGSGLLFFLGLIFSWWILVPAAINFFITFGADIVEPTWSIERYFDFVLLLMSSTALAFQLP
VLQFILGSLGIITTEKMISNWKIVVISSAILSAIITPSTDPLTMSLLSISIVFLFFVGTGLTYLSENLKSKTLSSSH

Specific function: Required For Correct Localization Of Precursor Proteins Bearing Signal Peptides With The Twin Arginine Conserved Motif S/T-R-R-X-F-L-K. This Sec-Independent Pathway Is Termed Tat For Twin-Arginine Translocation System. This System Mainly Transports Protei

COG id: COG0805

COG function: function code U; Sec-independent protein secretion pathway component TatC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tatC family [H]

Homologues:

Organism=Escherichia coli, GI2367313, Length=241, Percent_Identity=30.2904564315353, Blast_Score=102, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002033
- InterPro:   IPR019820
- InterPro:   IPR019822 [H]

Pfam domain/function: PF00902 TatC [H]

EC number: NA

Molecular weight: Translated: 26457; Mature: 26326

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS01218 TATC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFSDHLEELRQRILNSIYSILISIFLSFLIIKPLISFLEIPAGDIHLLQLAPGEFLFVA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEE
IKVAGYSGLIVSMPYIFYQIILFISPGLTKQEKSLILPAVFGSGLLFFLGLIFSWWILVP
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHH
AAINFFITFGADIVEPTWSIERYFDFVLLLMSSTALAFQLPVLQFILGSLGIITTEKMIS
HHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NWKIVVISSAILSAIITPSTDPLTMSLLSISIVFLFFVGTGLTYLSENLKSKTLSSSH
CCHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TFSDHLEELRQRILNSIYSILISIFLSFLIIKPLISFLEIPAGDIHLLQLAPGEFLFVA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEEE
IKVAGYSGLIVSMPYIFYQIILFISPGLTKQEKSLILPAVFGSGLLFFLGLIFSWWILVP
EEECCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHHHHHHHHHHHHHHHHHHHHH
AAINFFITFGADIVEPTWSIERYFDFVLLLMSSTALAFQLPVLQFILGSLGIITTEKMIS
HHHHHHHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
NWKIVVISSAILSAIITPSTDPLTMSLLSISIVFLFFVGTGLTYLSENLKSKTLSSSH
CCHHEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]