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The map label for this gene is 78778827

Identifier: 78778827

GI number: 78778827

Start: 418318

End: 418671

Strand: Reverse

Name: 78778827

Synonym: PMT9312_0442

Alternate gene names: NA

Gene position: 418671-418318 (Counterclockwise)

Preceding gene: 78778828

Following gene: 78778825

Centisome position: 24.5

GC content: 35.03

Gene sequence:

>354_bases
ATGCTAGAAGGAAAAGAACTTCTTGAAAAAGCAAAATTATTAAGTAAACAATCTGAAGATGAGATAGCGAAAGGTTGTGG
GTACGTAGGTCCTAGCGGAAGAGTCTTAAAAAAAAGTTTTTACAGGGCGCTTATCGAAGCCAAGGGTTATAAAATAGGAA
ATGGTCGTCAAGGCAAAAATGGTAATAGAGCGTCAAGAGGCAGACAGGCAGAATTTAAAACTAAGGTTCATGGCAATGGG
AACCTATTAATAGGTCATGCCTACACCAAAAAATTAGGTCTAGAACCAGGTCAGGAATTTAAAATTGATCTAAAAAAAGA
TTCAAAAACAATTTATCTGATTCCATTAAATTAA

Upstream 100 bases:

>100_bases
GAAAAATAAATTAATAAAAAATTAAATATATTTTTTATTAATTTATATTGCCACATCTCTAGTTTTTAGTAAGAATATAT
AATTAGAAATTTGTCAGATA

Downstream 100 bases:

>100_bases
AAAATATATTTTACCAACCGTTTTCTTTAAGCCACTTCGAAGAAATATTATTAGTAGAAAAATCTTCTTTATTATTCTTA
TTAAACAAAAGTAATTTCTC

Product: transcriptional regulator AbrB

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MLEGKELLEKAKLLSKQSEDEIAKGCGYVGPSGRVLKKSFYRALIEAKGYKIGNGRQGKNGNRASRGRQAEFKTKVHGNG
NLLIGHAYTKKLGLEPGQEFKIDLKKDSKTIYLIPLN

Sequences:

>Translated_117_residues
MLEGKELLEKAKLLSKQSEDEIAKGCGYVGPSGRVLKKSFYRALIEAKGYKIGNGRQGKNGNRASRGRQAEFKTKVHGNG
NLLIGHAYTKKLGLEPGQEFKIDLKKDSKTIYLIPLN
>Mature_117_residues
MLEGKELLEKAKLLSKQSEDEIAKGCGYVGPSGRVLKKSFYRALIEAKGYKIGNGRQGKNGNRASRGRQAEFKTKVHGNG
NLLIGHAYTKKLGLEPGQEFKIDLKKDSKTIYLIPLN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12934; Mature: 12934

Theoretical pI: Translated: 10.53; Mature: 10.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEGKELLEKAKLLSKQSEDEIAKGCGYVGPSGRVLKKSFYRALIEAKGYKIGNGRQGKN
CCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCC
GNRASRGRQAEFKTKVHGNGNLLIGHAYTKKLGLEPGQEFKIDLKKDSKTIYLIPLN
CCCCCCCCCCCEEEEECCCCCEEEEEHHHHHCCCCCCCCEEEEEECCCCEEEEEECC
>Mature Secondary Structure
MLEGKELLEKAKLLSKQSEDEIAKGCGYVGPSGRVLKKSFYRALIEAKGYKIGNGRQGKN
CCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCEECCCCCCCCC
GNRASRGRQAEFKTKVHGNGNLLIGHAYTKKLGLEPGQEFKIDLKKDSKTIYLIPLN
CCCCCCCCCCCEEEEECCCCCEEEEEHHHHHCCCCCCCCEEEEEECCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA