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The map label for this gene is psbL

Identifier: 78778686

GI number: 78778686

Start: 286667

End: 286786

Strand: Direct

Name: psbL

Synonym: PMT9312_0301

Alternate gene names: 78778686

Gene position: 286667-286786 (Clockwise)

Preceding gene: 78778685

Following gene: 78778687

Centisome position: 16.77

GC content: 29.17

Gene sequence:

>120_bases
ATGCAAGTAAACGAAAATCCTAACAAAGTTCCAGTTGAACTTAATCGTACAAGCCTTTATTTAGGCTTATTATCAGTCTT
TGTATTGGGAATTTTATTTTCCAGTTACTTTTTCAATTAA

Upstream 100 bases:

>100_bases
CTGTCCGTTGGCTAGCAGTTCACGCTCTAGCTATCCCATCAGTATTCTTTTTAGGTTCTATTGCTGCTATGCAATTCGTA
GCCCGATAAATTTAACTATC

Downstream 100 bases:

>100_bases
ATTAAAATCATGAGTAAATTAAAAGGACCTGATGGAAGAATTCCAGATAGACTTCCCGACGGTAGACCAGCAGTTGCATG
GGAAAGAAGATGGACTGAAG

Product: photosystem II reaction center L

Products: NA

Alternate protein names: PSII-L; PSII 5 kDa protein

Number of amino acids: Translated: 39; Mature: 39

Protein sequence:

>39_residues
MQVNENPNKVPVELNRTSLYLGLLSVFVLGILFSSYFFN

Sequences:

>Translated_39_residues
MQVNENPNKVPVELNRTSLYLGLLSVFVLGILFSSYFFN
>Mature_39_residues
MQVNENPNKVPVELNRTSLYLGLLSVFVLGILFSSYFFN

Specific function: Required for PSII activity

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbL family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBL_PROM0 (A3PB21)

Other databases:

- EMBL:   CP000576
- RefSeq:   YP_001090547.1
- ProteinModelPortal:   A3PB21
- SMR:   A3PB21
- STRING:   A3PB21
- GeneID:   4912693
- GenomeReviews:   CP000576_GR
- KEGG:   pmg:P9301_03231
- HOGENOM:   HBG711098
- ProtClustDB:   PRK00753
- GO:   GO:0015979
- HAMAP:   MF_01317
- InterPro:   IPR003372
- ProDom:   PD005113

Pfam domain/function: PF02419 PsbL

EC number: NA

Molecular weight: Translated: 4464; Mature: 4464

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x103d06b4)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVNENPNKVPVELNRTSLYLGLLSVFVLGILFSSYFFN
CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCH
>Mature Secondary Structure
MQVNENPNKVPVELNRTSLYLGLLSVFVLGILFSSYFFN
CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA