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The map label for this gene is ybhK [C]

Identifier: 78778678

GI number: 78778678

Start: 281578

End: 282963

Strand: Direct

Name: ybhK [C]

Synonym: PMT9312_0293

Alternate gene names: 78778678

Gene position: 281578-282963 (Clockwise)

Preceding gene: 78778675

Following gene: 78778682

Centisome position: 16.47

GC content: 33.04

Gene sequence:

>1386_bases
ATGAATAATCAAAAAAAAAGAATTAGAAGATATTATAAGTATTTTGAAAAGTCCAAATTTGTCTTGCTAAATGAAATTTT
AAGAATTTTGAGTTGGCTTTTACCAGGCTTGGTAATAAAAAGATGGATGATTACATCTGCAATTGGATTTTTGACATCAT
TATTAGGACTAGTAATTTGGACAAATTTAAGGCCACTCTATTGGCTTATTGAAGTATTTTTTGGGATAATGACAGGCTTA
ACTAGTATCTTACCTGTTTCATTATTGGGGCCATTAATTTTTGTTCTTGGACTTTTATTAATTGGGATTGGACAAAATAG
AAGTATTAATTCTATTAAAAAAGCCCTTGCTCCAGAAAAAAGCACATTTTTAGTTGATGCATTAAGAGTTAAGAGTAAAT
TAAACAGGGGCCCTAATATTGTCGCAATTGGTGGAGGAACAGGCTTATCTACTTTATTGAAAGGCTTAAAAAATTACAGC
AGTAATATTACAGCAATCGTAACTGTATCCGATGATGGCGGAAGTAGTGGAATTCTTAGAAAACAATTAGGTGTCCAACC
TCCAGGAGATATTAGAAATTGTTTGGCTGCCTTATCAAACGAAGAACCAATTTTAACTAGATTATTTCAATATAGATTTT
CAGGAGGTAGTGGCCTAGAGGGTCATAGTTTTGGGAATCTATTTTTGTCAGCTTTAACAACAATTACAGGTAGTTTAGAA
AAAGCAGTACAAGCCTCTAGTAAGGTTTTAGCTGTACAAGGTCAAGTTTTACCTGCTACAAATATTGATGTAATGTTATG
GGCTGAATTAGAGGATGGTCAAAAAATTTTTGGTGAAAGCAATATCAGTAAATCTAAAAAATTAATTTCAAAGATTGGAT
ACTTGCCAGAAAATCCTTCTGCTCTCCCAAGTGCTCTGGAATCTATAAAAGAAGCTGACTTAATTGTTCTTGGCCCTGGT
AGTCTATACACTTCCTTATTGCCAAACTTATTGGTACCCGAGATAGTAGATGCTTTATTGCAAAATAATGCTCCCAAAAT
TTATATAAGTAATTTGATGACTCAGCCTGGCGAAACAGATGGACTTAATGTTTATCAACATATCAAATCAATAGAAAAAC
AATTATCAAATTTTGGAGTTAATACTAGAATTTTTAATGCGATTCTATCTCAGGCTCTATTTGAAAAGTCTCCTCTAGTA
GACTATTACGCAAGTAGGGGAGCAGAACCTGTCCAATGTAATAAAGAAAAATTATTATCTGAGGGTTATTATGTTTTGCA
GGCACCATTGTATTCAAGAAGAATCACTCCCACTCTTAGACATGATCCTAGGAGACTAGCAAGAGCGGTTATTTTCATGT
ACCGCAAATTAAAGAAATTAAACTAA

Upstream 100 bases:

>100_bases
TATTGCCTATTTTTAGAAATAAAAAAAGGATGTGTGAATTTGATTTATAATGCATATATCTTTTTTTTAAATTTGTGAAA
AATAATTTAAGAGGTTTTTA

Downstream 100 bases:

>100_bases
TAAGCATCTTGAAGTTCATAGAAGTCTGGTTGAATATAGTCTTTTCTCAATGGCCATCCTCTCCAGTCTTCAGGCATTAG
GAGTCTTTTGGGATTTGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 461

Protein sequence:

>461_residues
MNNQKKRIRRYYKYFEKSKFVLLNEILRILSWLLPGLVIKRWMITSAIGFLTSLLGLVIWTNLRPLYWLIEVFFGIMTGL
TSILPVSLLGPLIFVLGLLLIGIGQNRSINSIKKALAPEKSTFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYS
SNITAIVTVSDDGGSSGILRKQLGVQPPGDIRNCLAALSNEEPILTRLFQYRFSGGSGLEGHSFGNLFLSALTTITGSLE
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGQKIFGESNISKSKKLISKIGYLPENPSALPSALESIKEADLIVLGPG
SLYTSLLPNLLVPEIVDALLQNNAPKIYISNLMTQPGETDGLNVYQHIKSIEKQLSNFGVNTRIFNAILSQALFEKSPLV
DYYASRGAEPVQCNKEKLLSEGYYVLQAPLYSRRITPTLRHDPRRLARAVIFMYRKLKKLN

Sequences:

>Translated_461_residues
MNNQKKRIRRYYKYFEKSKFVLLNEILRILSWLLPGLVIKRWMITSAIGFLTSLLGLVIWTNLRPLYWLIEVFFGIMTGL
TSILPVSLLGPLIFVLGLLLIGIGQNRSINSIKKALAPEKSTFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYS
SNITAIVTVSDDGGSSGILRKQLGVQPPGDIRNCLAALSNEEPILTRLFQYRFSGGSGLEGHSFGNLFLSALTTITGSLE
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGQKIFGESNISKSKKLISKIGYLPENPSALPSALESIKEADLIVLGPG
SLYTSLLPNLLVPEIVDALLQNNAPKIYISNLMTQPGETDGLNVYQHIKSIEKQLSNFGVNTRIFNAILSQALFEKSPLV
DYYASRGAEPVQCNKEKLLSEGYYVLQAPLYSRRITPTLRHDPRRLARAVIFMYRKLKKLN
>Mature_461_residues
MNNQKKRIRRYYKYFEKSKFVLLNEILRILSWLLPGLVIKRWMITSAIGFLTSLLGLVIWTNLRPLYWLIEVFFGIMTGL
TSILPVSLLGPLIFVLGLLLIGIGQNRSINSIKKALAPEKSTFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYS
SNITAIVTVSDDGGSSGILRKQLGVQPPGDIRNCLAALSNEEPILTRLFQYRFSGGSGLEGHSFGNLFLSALTTITGSLE
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGQKIFGESNISKSKKLISKIGYLPENPSALPSALESIKEADLIVLGPG
SLYTSLLPNLLVPEIVDALLQNNAPKIYISNLMTQPGETDGLNVYQHIKSIEKQLSNFGVNTRIFNAILSQALFEKSPLV
DYYASRGAEPVQCNKEKLLSEGYYVLQAPLYSRRITPTLRHDPRRLARAVIFMYRKLKKLN

Specific function: Unknown

COG id: COG0391

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0052 family [H]

Homologues:

Organism=Escherichia coli, GI1786997, Length=224, Percent_Identity=40.1785714285714, Blast_Score=146, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002882
- InterPro:   IPR010119 [H]

Pfam domain/function: PF01933 UPF0052 [H]

EC number: NA

Molecular weight: Translated: 50861; Mature: 50861

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNQKKRIRRYYKYFEKSKFVLLNEILRILSWLLPGLVIKRWMITSAIGFLTSLLGLVIW
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLRPLYWLIEVFFGIMTGLTSILPVSLLGPLIFVLGLLLIGIGQNRSINSIKKALAPEK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
STFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYSSNITAIVTVSDDGGSSGILR
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHH
KQLGVQPPGDIRNCLAALSNEEPILTRLFQYRFSGGSGLEGHSFGNLFLSALTTITGSLE
HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGQKIFGESNISKSKKLISKIGYLPENPS
HHHHHHCCEEEEECCEECCCCCCEEEEEECCCCHHHHCCCCHHHHHHHHHHHCCCCCCCC
ALPSALESIKEADLIVLGPGSLYTSLLPNLLVPEIVDALLQNNAPKIYISNLMTQPGETD
HHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCC
GLNVYQHIKSIEKQLSNFGVNTRIFNAILSQALFEKSPLVDYYASRGAEPVQCNKEKLLS
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHH
EGYYVLQAPLYSRRITPTLRHDPRRLARAVIFMYRKLKKLN
CCCEEEECCHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNNQKKRIRRYYKYFEKSKFVLLNEILRILSWLLPGLVIKRWMITSAIGFLTSLLGLVIW
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TNLRPLYWLIEVFFGIMTGLTSILPVSLLGPLIFVLGLLLIGIGQNRSINSIKKALAPEK
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
STFLVDALRVKSKLNRGPNIVAIGGGTGLSTLLKGLKNYSSNITAIVTVSDDGGSSGILR
HHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHH
KQLGVQPPGDIRNCLAALSNEEPILTRLFQYRFSGGSGLEGHSFGNLFLSALTTITGSLE
HHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
KAVQASSKVLAVQGQVLPATNIDVMLWAELEDGQKIFGESNISKSKKLISKIGYLPENPS
HHHHHHCCEEEEECCEECCCCCCEEEEEECCCCHHHHCCCCHHHHHHHHHHHCCCCCCCC
ALPSALESIKEADLIVLGPGSLYTSLLPNLLVPEIVDALLQNNAPKIYISNLMTQPGETD
HHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCC
GLNVYQHIKSIEKQLSNFGVNTRIFNAILSQALFEKSPLVDYYASRGAEPVQCNKEKLLS
CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHH
EGYYVLQAPLYSRRITPTLRHDPRRLARAVIFMYRKLKKLN
CCCEEEECCHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]