| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is 78778641
Identifier: 78778641
GI number: 78778641
Start: 243166
End: 245097
Strand: Direct
Name: 78778641
Synonym: PMT9312_0256
Alternate gene names: NA
Gene position: 243166-245097 (Clockwise)
Preceding gene: 78778640
Following gene: 78778646
Centisome position: 14.23
GC content: 27.64
Gene sequence:
>1932_bases TTGACTTTTATTGCAGGAATATCAAAAAAGGTAATATCTATTTCTCTTTTGTTTATTAATCTCCTACAGCCATTAAAATC TGCTGACTTAGAGAAAATTAATAGAAGCGAAAATAATACAGAAACAAAATTAAGTAATTTAAAAAGATCAAATAAATCAG AGCTTCTATTGGTTTCTAATAGCAAACAGCTAAATGAGATAGTAATCCAATCCGATAAACAGTCTGAAATAAATGATGTT ATTTATGCAGAAGGCAATGTATCTTTGTCATATAGAGGGAAATTGCTACAAGCTGATAATTTAACCTACGACAAGTTAAA TAAAAAAATTAGTGCTAAAGGAAATATTGTATTGATATTGGGGGATCAAATCTTTAAAGTTTCAAAATTAGAGTACAGCT TTATTAGTGAAAAAGGTTATTTATTAGATGTTCAGGGATCTATTAATACCAATACCTTGATGGATGACTTGTCCTCGAAT TTCAGCTTTTCGGATGCAAATAAGATAGAAAGTTTACTTAAATTAGAAAAAGAAGAAGCCTTAAATACTCCAGGTCAGAT TAATAATTGGATTTTTTCTACAGAAAGAATAAGTATTGATGGAAAAAAATGGAAGAGTAATAAAGCAATATTTTCCAATG ATATCCTTCAATCTAAACAGGTAAAAATAGAAATTAATTCATTGGAAGCTTACTCTTCTAATGAAGAATTAAGATTTAGA TCATCTTTGAATTATTTAGTTTTAGATGAAAATGTTTCAATCCCATTTTGGTTTGGTAATAGAACTCTTCCTAAATCCGG ACAAAATTTAGATTCAAAAAGTAGTTGGACGATAGGTTATGACAACCTAGATAAAGATGGTTTATTTATTGGTAAAAAAT TTAATTCCTTAAATTTATCTGATGATTTTATTATTAATTTAGAACCGCAATTTTTAATTCAACGTTCATTTAATGGGATA ACAAATAGTTTTGTAAAGAAAGGAGATTTAATAACTGGAGAAAAAGTAGAAAGAGATGCTAAATTTGCTGATTATTTTGG GTTTAAATCAGAAATAAAAGGGAAAGTTAATAATTGGGATTTGGAAATAGTTAATGAAATAAACTCCTTAGACACTAATA AATTTTCTGATGCGCTTAGATCTAAATCTATTTTGAACAAACAAATTAATTTCTTGAATGCTAAATGGGATAAAAGTTTT TACGGAGTTTATAGAGATAGAGTATGGAATGGTTCATTGGGGGAATCTGAAATTTATGCAGGTTATGGTTCAAAATTAGA AAAAAAACATACTTGGGAAGTAAATGGTACAAATAAAACTGAAGTTTTTTCTTTAGGTCTGGCACATTTAAAAGGAGAGG CGCTAGGTAGTAAAAGCTTAGTTAATAGTGTTAAAGGTAATTTGTTTTACTCCTTAGATCAAAATATTCCATTAAGTGTT GATAAACCTAAAAATAAAATTATTAATAGTTCCTATGAGTATATTTATGAGCCAATTAAAAAAGGACTAAGTCTAAATAC GAGACTAGCTGGAATGTATTCTCTATATCATGATGGAAATCATCAAGAATATATTGGTTTCGGTTTCGGACCAGAGTTGA TTTTAGGTAATTTCAAAACAAAAACTTTTGATTATACCCGAATTAGTATTCTCCCTTTTTATAAATTTAATAACGGAGAC AGTATATTTAAGTTTGACCAAATTTCTGACAAATTTACTTTAGATATTGGTTTTGACCAACAACTGTTTGGCCCAATTTT GCTTAAAAGTAATGGAACATTAAACCTAGATAGTGATTCTAATGATTATGGGCAATTCATAAATTCAAAAATCTCTATAA ATTGGAAAAAAAGATCTTATGAATTTGGTATTTTTTATCAACCTCATATTCAAGCTGGAGGAATTTCTTTTAATTTATTT GGATTTAAATAG
Upstream 100 bases:
>100_bases TTGGAATCTTTCTCTTCGGATTCTTAGCTAGTGATCCAACAAGAACACCAAATAGAAAAGACTTGGAGAGTCCTCAAGAT TAATCTTTTAATTTAATTCA
Downstream 100 bases:
>100_bases CTACAAGAAATAAGGATTAAATTTCAAATAGGGTAAATCATTAAATTTATTTTCAATTAGATTTTCATTCTCAAGTAGTG TTGAAGTTGCATCCCATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 643; Mature: 642
Protein sequence:
>643_residues MTFIAGISKKVISISLLFINLLQPLKSADLEKINRSENNTETKLSNLKRSNKSELLLVSNSKQLNEIVIQSDKQSEINDV IYAEGNVSLSYRGKLLQADNLTYDKLNKKISAKGNIVLILGDQIFKVSKLEYSFISEKGYLLDVQGSINTNTLMDDLSSN FSFSDANKIESLLKLEKEEALNTPGQINNWIFSTERISIDGKKWKSNKAIFSNDILQSKQVKIEINSLEAYSSNEELRFR SSLNYLVLDENVSIPFWFGNRTLPKSGQNLDSKSSWTIGYDNLDKDGLFIGKKFNSLNLSDDFIINLEPQFLIQRSFNGI TNSFVKKGDLITGEKVERDAKFADYFGFKSEIKGKVNNWDLEIVNEINSLDTNKFSDALRSKSILNKQINFLNAKWDKSF YGVYRDRVWNGSLGESEIYAGYGSKLEKKHTWEVNGTNKTEVFSLGLAHLKGEALGSKSLVNSVKGNLFYSLDQNIPLSV DKPKNKIINSSYEYIYEPIKKGLSLNTRLAGMYSLYHDGNHQEYIGFGFGPELILGNFKTKTFDYTRISILPFYKFNNGD SIFKFDQISDKFTLDIGFDQQLFGPILLKSNGTLNLDSDSNDYGQFINSKISINWKKRSYEFGIFYQPHIQAGGISFNLF GFK
Sequences:
>Translated_643_residues MTFIAGISKKVISISLLFINLLQPLKSADLEKINRSENNTETKLSNLKRSNKSELLLVSNSKQLNEIVIQSDKQSEINDV IYAEGNVSLSYRGKLLQADNLTYDKLNKKISAKGNIVLILGDQIFKVSKLEYSFISEKGYLLDVQGSINTNTLMDDLSSN FSFSDANKIESLLKLEKEEALNTPGQINNWIFSTERISIDGKKWKSNKAIFSNDILQSKQVKIEINSLEAYSSNEELRFR SSLNYLVLDENVSIPFWFGNRTLPKSGQNLDSKSSWTIGYDNLDKDGLFIGKKFNSLNLSDDFIINLEPQFLIQRSFNGI TNSFVKKGDLITGEKVERDAKFADYFGFKSEIKGKVNNWDLEIVNEINSLDTNKFSDALRSKSILNKQINFLNAKWDKSF YGVYRDRVWNGSLGESEIYAGYGSKLEKKHTWEVNGTNKTEVFSLGLAHLKGEALGSKSLVNSVKGNLFYSLDQNIPLSV DKPKNKIINSSYEYIYEPIKKGLSLNTRLAGMYSLYHDGNHQEYIGFGFGPELILGNFKTKTFDYTRISILPFYKFNNGD SIFKFDQISDKFTLDIGFDQQLFGPILLKSNGTLNLDSDSNDYGQFINSKISINWKKRSYEFGIFYQPHIQAGGISFNLF GFK >Mature_642_residues TFIAGISKKVISISLLFINLLQPLKSADLEKINRSENNTETKLSNLKRSNKSELLLVSNSKQLNEIVIQSDKQSEINDVI YAEGNVSLSYRGKLLQADNLTYDKLNKKISAKGNIVLILGDQIFKVSKLEYSFISEKGYLLDVQGSINTNTLMDDLSSNF SFSDANKIESLLKLEKEEALNTPGQINNWIFSTERISIDGKKWKSNKAIFSNDILQSKQVKIEINSLEAYSSNEELRFRS SLNYLVLDENVSIPFWFGNRTLPKSGQNLDSKSSWTIGYDNLDKDGLFIGKKFNSLNLSDDFIINLEPQFLIQRSFNGIT NSFVKKGDLITGEKVERDAKFADYFGFKSEIKGKVNNWDLEIVNEINSLDTNKFSDALRSKSILNKQINFLNAKWDKSFY GVYRDRVWNGSLGESEIYAGYGSKLEKKHTWEVNGTNKTEVFSLGLAHLKGEALGSKSLVNSVKGNLFYSLDQNIPLSVD KPKNKIINSSYEYIYEPIKKGLSLNTRLAGMYSLYHDGNHQEYIGFGFGPELILGNFKTKTFDYTRISILPFYKFNNGDS IFKFDQISDKFTLDIGFDQQLFGPILLKSNGTLNLDSDSNDYGQFINSKISINWKKRSYEFGIFYQPHIQAGGISFNLFG FK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73022; Mature: 72891
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 0.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 0.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFIAGISKKVISISLLFINLLQPLKSADLEKINRSENNTETKLSNLKRSNKSELLLVSN CCEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEC SKQLNEIVIQSDKQSEINDVIYAEGNVSLSYRGKLLQADNLTYDKLNKKISAKGNIVLIL CCCCHHHEECCCCCCCCCEEEEECCCEEEEECCEEEECCCCCHHHHCCEECCCCCEEEEE GDQIFKVSKLEYSFISEKGYLLDVQGSINTNTLMDDLSSNFSFSDANKIESLLKLEKEEA CCCEEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LNTPGQINNWIFSTERISIDGKKWKSNKAIFSNDILQSKQVKIEINSLEAYSSNEELRFR CCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEEEEEEEECCCCCEEEE SSLNYLVLDENVSIPFWFGNRTLPKSGQNLDSKSSWTIGYDNLDKDGLFIGKKFNSLNLS CCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCC DDFIINLEPQFLIQRSFNGITNSFVKKGDLITGEKVERDAKFADYFGFKSEIKGKVNNWD CCEEEECCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHCCCCHHHHCCCHHHHCCCCCCCC LEIVNEINSLDTNKFSDALRSKSILNKQINFLNAKWDKSFYGVYRDRVWNGSLGESEIYA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCCCEEE GYGSKLEKKHTWEVNGTNKTEVFSLGLAHLKGEALGSKSLVNSVKGNLFYSLDQNIPLSV CCCCCCCCCEEEEECCCCCCEEEEEHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCEEC DKPKNKIINSSYEYIYEPIKKGLSLNTRLAGMYSLYHDGNHQEYIGFGFGPELILGNFKT CCCHHHHCCCHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCEEEEECCCHHHEEECCCC KTFDYTRISILPFYKFNNGDSIFKFDQISDKFTLDIGFDQQLFGPILLKSNGTLNLDSDS CEEEEEEEEEEEEEEECCCCCEEEEECCCCEEEEEECCCHHHCCCEEEECCCEEEECCCC NDYGQFINSKISINWKKRSYEFGIFYQPHIQAGGISFNLFGFK CHHHHHCCCEEEEEEEECCEEEEEEECCCEEECCEEEEEEECC >Mature Secondary Structure TFIAGISKKVISISLLFINLLQPLKSADLEKINRSENNTETKLSNLKRSNKSELLLVSN CEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEC SKQLNEIVIQSDKQSEINDVIYAEGNVSLSYRGKLLQADNLTYDKLNKKISAKGNIVLIL CCCCHHHEECCCCCCCCCEEEEECCCEEEEECCEEEECCCCCHHHHCCEECCCCCEEEEE GDQIFKVSKLEYSFISEKGYLLDVQGSINTNTLMDDLSSNFSFSDANKIESLLKLEKEEA CCCEEEEECCEEEEECCCCEEEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH LNTPGQINNWIFSTERISIDGKKWKSNKAIFSNDILQSKQVKIEINSLEAYSSNEELRFR CCCCCCCCCEEEEEEEEEECCCCCCCCCCEEECCCCCCCEEEEEEEEEEEECCCCCEEEE SSLNYLVLDENVSIPFWFGNRTLPKSGQNLDSKSSWTIGYDNLDKDGLFIGKKFNSLNLS CCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCCCCCC DDFIINLEPQFLIQRSFNGITNSFVKKGDLITGEKVERDAKFADYFGFKSEIKGKVNNWD CCEEEECCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHCCCCHHHHCCCHHHHCCCCCCCC LEIVNEINSLDTNKFSDALRSKSILNKQINFLNAKWDKSFYGVYRDRVWNGSLGESEIYA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHCCCCCCCCCCCEEE GYGSKLEKKHTWEVNGTNKTEVFSLGLAHLKGEALGSKSLVNSVKGNLFYSLDQNIPLSV CCCCCCCCCEEEEECCCCCCEEEEEHHHHHCCCCCCCHHHHHHHCCCEEEEECCCCCEEC DKPKNKIINSSYEYIYEPIKKGLSLNTRLAGMYSLYHDGNHQEYIGFGFGPELILGNFKT CCCHHHHCCCHHHHHHHHHHCCCCCCCHHHEEEEEEECCCCCEEEEECCCHHHEEECCCC KTFDYTRISILPFYKFNNGDSIFKFDQISDKFTLDIGFDQQLFGPILLKSNGTLNLDSDS CEEEEEEEEEEEEEEECCCCCEEEEECCCCEEEEEECCCHHHCCCEEEECCCEEEECCCC NDYGQFINSKISINWKKRSYEFGIFYQPHIQAGGISFNLFGFK CHHHHHCCCEEEEEEEECCEEEEEEECCCEEECCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA