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The map label for this gene is yfcH [C]

Identifier: 78778509

GI number: 78778509

Start: 120322

End: 121248

Strand: Reverse

Name: yfcH [C]

Synonym: PMT9312_0123

Alternate gene names: 78778509

Gene position: 121248-120322 (Counterclockwise)

Preceding gene: 78778511

Following gene: 78778504

Centisome position: 7.09

GC content: 31.39

Gene sequence:

>927_bases
ATGCGTCTTTTATTAATTGGCTGCACTGGATTTGTTGGTAAAGAATTAGTACCAACAATACTCAATGAAAATCACGAAAT
ATACATCGTAAGTAGAAAACCCATAAGTAAATTAAAGCTTGATTTAGATTTCAATAAATTTAAATTTTTGCAAATAGATT
TATCAAAAGAAAAAAACTGGAATAATGAAAATCTTCTAAATATTTTAAGAGAGACAGATGGAATCATTAACTTAATGGGA
GAACCTATAGCAGAAAAAAAATGGACTTCTGCACAAAAACAGGAGATTGAAAATAGTCGTATTAACACTACGAAATTTAT
GATGAAGACCCTTAAAAATTTCAAAATAAACCCAAAAGTCATTATAAATGGATCAGCAATAGGTTATTACGGTACAAGTT
TGTCTGGTGAATTCACTGAAAATAGTATTGGAGGAAAAGACTTTTTAGCTAATCTTTGCAAAAAATGGGAAGCGGTAGCT
GCGGAAAAACCATTCTTCTCAAGGTTAGTTATTTTTAGAATTGGAATTGTTCTAGAGGCAGATGGAGGAGCATTAGGAAA
AATGCTACCTATATTTAAAATTGGATTAGGTGGACCAATTGGAGATGGTAAGCAATGGATGAGTTGGATTCATAGGAGTG
ATTTATGTGCATTAATTACTCAAGCATTAGATAATAAAAAGTATTCAGGAGTATTTAATGCTGTTGCACCAAATCCAGTA
TTAATGAGAGACTTTTCTGAGACTTTAGGCAAATGTCTGAATAGACCTAATTTACTTCCAGTACCTGGGGCGGTTTTAAA
AATTTTGTTAGGAGATGGAGCAAAAGTTGTATTAGAAGGACAAAAAGTAATAAGCAGTAAACTCAAAAATTATAATTTTA
AATATCCTCTTCTTGAGAAAGCAATTTACGCCTCCACCAAGAATTAA

Upstream 100 bases:

>100_bases
AAAAACTTATTTGATAAATATTTAAAAAAATTGATAACAGAATAATAATTACAAACGTCTAAAAAATTTAATAGGCTTAA
ATGATAAATATCTATAAAAT

Downstream 100 bases:

>100_bases
TACCGTTTAGTAAAGCACCAATAATAAGAATTGTTATTAATGGGACTATAAGAGGATTCCAAACTATCTGAATAAAATTA
ATAAAAATAAATATCCCATT

Product: putative cell division inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRLLLIGCTGFVGKELVPTILNENHEIYIVSRKPISKLKLDLDFNKFKFLQIDLSKEKNWNNENLLNILRETDGIINLMG
EPIAEKKWTSAQKQEIENSRINTTKFMMKTLKNFKINPKVIINGSAIGYYGTSLSGEFTENSIGGKDFLANLCKKWEAVA
AEKPFFSRLVIFRIGIVLEADGGALGKMLPIFKIGLGGPIGDGKQWMSWIHRSDLCALITQALDNKKYSGVFNAVAPNPV
LMRDFSETLGKCLNRPNLLPVPGAVLKILLGDGAKVVLEGQKVISSKLKNYNFKYPLLEKAIYASTKN

Sequences:

>Translated_308_residues
MRLLLIGCTGFVGKELVPTILNENHEIYIVSRKPISKLKLDLDFNKFKFLQIDLSKEKNWNNENLLNILRETDGIINLMG
EPIAEKKWTSAQKQEIENSRINTTKFMMKTLKNFKINPKVIINGSAIGYYGTSLSGEFTENSIGGKDFLANLCKKWEAVA
AEKPFFSRLVIFRIGIVLEADGGALGKMLPIFKIGLGGPIGDGKQWMSWIHRSDLCALITQALDNKKYSGVFNAVAPNPV
LMRDFSETLGKCLNRPNLLPVPGAVLKILLGDGAKVVLEGQKVISSKLKNYNFKYPLLEKAIYASTKN
>Mature_308_residues
MRLLLIGCTGFVGKELVPTILNENHEIYIVSRKPISKLKLDLDFNKFKFLQIDLSKEKNWNNENLLNILRETDGIINLMG
EPIAEKKWTSAQKQEIENSRINTTKFMMKTLKNFKINPKVIINGSAIGYYGTSLSGEFTENSIGGKDFLANLCKKWEAVA
AEKPFFSRLVIFRIGIVLEADGGALGKMLPIFKIGLGGPIGDGKQWMSWIHRSDLCALITQALDNKKYSGVFNAVAPNPV
LMRDFSETLGKCLNRPNLLPVPGAVLKILLGDGAKVVLEGQKVISSKLKNYNFKYPLLEKAIYASTKN

Specific function: Unknown

COG id: COG1090

COG function: function code R; Predicted nucleoside-diphosphate sugar epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sugar epimerase family. SDR39U1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI116812630, Length=308, Percent_Identity=36.038961038961, Blast_Score=188, Evalue=5e-48,
Organism=Escherichia coli, GI1788642, Length=305, Percent_Identity=37.0491803278689, Blast_Score=208, Evalue=4e-55,
Organism=Drosophila melanogaster, GI28573846, Length=310, Percent_Identity=30.9677419354839, Blast_Score=142, Evalue=4e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013549
- InterPro:   IPR001509
- InterPro:   IPR016040
- InterPro:   IPR010099 [H]

Pfam domain/function: PF08338 DUF1731; PF01370 Epimerase [H]

EC number: NA

Molecular weight: Translated: 34369; Mature: 34369

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLIGCTGFVGKELVPTILNENHEIYIVSRKPISKLKLDLDFNKFKFLQIDLSKEKNW
CEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHEEEEECCCEEEEEEEEECCCCCC
NNENLLNILRETDGIINLMGEPIAEKKWTSAQKQEIENSRINTTKFMMKTLKNFKINPKV
CHHHHHHHHHHCCCHHHHCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEE
IINGSAIGYYGTSLSGEFTENSIGGKDFLANLCKKWEAVAAEKPFFSRLVIFRIGIVLEA
EECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEC
DGGALGKMLPIFKIGLGGPIGDGKQWMSWIHRSDLCALITQALDNKKYSGVFNAVAPNPV
CCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCH
LMRDFSETLGKCLNRPNLLPVPGAVLKILLGDGAKVVLEGQKVISSKLKNYNFKYPLLEK
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCHHHHH
AIYASTKN
HHHHCCCC
>Mature Secondary Structure
MRLLLIGCTGFVGKELVPTILNENHEIYIVSRKPISKLKLDLDFNKFKFLQIDLSKEKNW
CEEEEEECCCCCCHHHHHHHHCCCCEEEEEECCCHHHEEEEECCCEEEEEEEEECCCCCC
NNENLLNILRETDGIINLMGEPIAEKKWTSAQKQEIENSRINTTKFMMKTLKNFKINPKV
CHHHHHHHHHHCCCHHHHCCCCCHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCEE
IINGSAIGYYGTSLSGEFTENSIGGKDFLANLCKKWEAVAAEKPFFSRLVIFRIGIVLEA
EECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEC
DGGALGKMLPIFKIGLGGPIGDGKQWMSWIHRSDLCALITQALDNKKYSGVFNAVAPNPV
CCCCHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCH
LMRDFSETLGKCLNRPNLLPVPGAVLKILLGDGAKVVLEGQKVISSKLKNYNFKYPLLEK
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHCCCCCCHHHHH
AIYASTKN
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]