| Definition | Prochlorococcus marinus str. MIT 9312, complete genome. |
|---|---|
| Accession | NC_007577 |
| Length | 1,709,204 |
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The map label for this gene is purL [H]
Identifier: 78778388
GI number: 78778388
Start: 2072
End: 4411
Strand: Direct
Name: purL [H]
Synonym: PMT9312_0003
Alternate gene names: 78778388
Gene position: 2072-4411 (Clockwise)
Preceding gene: 78778387
Following gene: 78778389
Centisome position: 0.12
GC content: 31.84
Gene sequence:
>2340_bases ATGATAAATCCAGACAATAATGATCTTTATGATCTTAATGAAGCGCTTAAAGTTGAAAATTTAACAATTAATGATTACGA GGAAATTTGCAAAAGATTAAAGAGAAAACCTAATAGGACTGAACTAGGAATGTTTGGTGTTATGTGGTCTGAACATTGTT GTTATAGGAATTCCAAACCTTTACTATCAAATTTTCCTACTAAAGGAAAAAACATTTTGGTTGGCCCTGGAGAAAACGCT GGTGTTATTGATGTTGGAAATAATCAAAAACTTGTTTTTAAAATAGAAAGTCATAATCATCCCTCTGCAATTGAACCTTT TCAAGGAGCCGCAACAGGAGTAGGAGGAATATTAAGAGATATTTTTACAATGGGAGCAAGGCCAATCGCAGTATTGAATT CATTGAGATTTGGAAATCTTGATAAGACATCAAATATGGATTTACTTCGAGGAGTTGTATCAGGTATTGCACATTATGGA AATTGTGTAGGTGTTCCTACTGTTGGAGGTGAGATTGACTTCGATGATAGTTATTCTGGAAATCCTCTAGTCAATGTTAT GGCCTTAGGGCTTTTAGAGACTAATGAAATAGTTTGTTCTGGAGCTAAAAATGTAGGATCACCAGTACTATATGTTGGTA ATACAACTGGTAGAGATGGTGTTGGTGGTGCTAGTTTCGCAAGTTCAGAATTAACTATTACTTCATTAGATGATAGACCT GCAGTGCAAGTAGGTGATCCATTTATTGAGAAAAGTCTTATAGAAGCTTGTTTAGATGCTTTTAAGACAGGAGATGTAAT TGCAGCTCAAGATATGGGTGCAGCAGGTTTAACCTGCAGTAGTGCAGAAATGGCCGCTAATGGAAACTTAGGTATATCTA TTGATTTAGATTTAGTTCCTTCTAGAGAAGATAATATGTCTTCATACCAATATTTATTATCTGAATCTCAAGAGAGAATG TTGTTTGTTGTAAAAGAAGAAAAAATTAATAATCTTATTGAGAAATTTAATAAATGGGGATTATATGCCAATGTAATTGG TGAAGTAATAGAGACTAATGAGGTAATTATTTCTCATAAACGAAAAATTGTTGCTCAAATACCTACTTCTGCTCTATCTG ATGATACGCCTGTTAATTTACATAATGTGATGAAAAATCCACCTAATTATTTGTTAAAGAAATGGAAATGGAATGAAAAT AATTTACCAGAAATTAATGAGCAAAAAATATTTTCATTAAAGGAAAACAAAAGTTTTTCTTATTCGGAAATCATTTTAAA ACTTCTCGCTAACCCATCAATAGCTTCTAAAAGATGGATTTATAAACAATATGACTCTCAAGTCCAGGCAAATACTGTTT TTAAACCTGGAGAATCAGATGCTGCTGTAATAAGATTAAGAGAACAAAATGAAAAAAATAAAAGTAAAGTATTTTCTGGT GTTGCTGCTTCAGTTGACTGTAATAGTAGATGGGTTTCTCTTGACCCTTTTAGAGGAACTATTGCTGCAGTTGCAGAATC CGCAAGAAATGTGAGTTGTGTTGGAGCTGAACCAGTAGCAATTACAAATAATTTAAATTTTTCATCTCCTGAGACTGAAA TTGGATATTGGCAACTTTCATCTTCATGCAATGCAATTTCTGAAGCCTGTAAAGCTTTAGAAACTCCAGTTACGGGAGGA AATGTTTCCTTATATAATGAATCCAAAAATAGAGATAATGAAATTACTCCTATTAATCCGACTCCAGTTATTGGAATGGT TGGGAAGATAGATAATGTTGAAAAAGCTATAAGTACTGAATGGAAAAATATTAATGATCAAATCTGGTTGATTGGCTCTC ATAAATCAGAAACAACAATTGCAGCTAGTTCTTATTTGGAATATTTTCATGGAGAAATTACAGGTCGTCCTCCAAAAATA GATTTACAGGATGAAAAGTTTTGCCAGAGTTTTTTAAGAAATGCGATTTTAAATAATTTTGTAGTTTCTTCTCATGATAT TAGCGATGGGGGTTTAGCTATAGCTTTAGCAGAGTGTTGTATTTTGTCCGCAAAAGGCGCAACTATTGAATTAGAGAAAG ATCTTAATAGAGATGATAATGTATTGTTTTCAGAAGGAGGTTCTAGAATTATTTTTTCAATAGATAAAATGAAGGAAAAA GAATGGAGTAATTATCTAAAAAAGATTCAAATAAATTCTCAATCAAATGTATATGTAAAAAAAATAGGATATGTTTCGAG TGAAATCCTTAAGATAAAAATCCAAGATAAAAATATCTGTGATATTAGTGTTGAGGAATTAACCGAAAAATTTAATAATA GTATTTCAGGTTACTTTTAA
Upstream 100 bases:
>100_bases TATAAACCAAAACTTAGGTTTTAAACAAAAAAGTTTTTATAATGATAAAACATCAAGATCTTTTAGTGATAAAAAAGAAG ATGACCCTTGGATCTGAAGA
Downstream 100 bases:
>100_bases ATATGAAATATACTTCTCAACTATCAAAATTTTTCAGTAATTAAGTTATGTGCGGAATAGTTGGAATCGTTTCTTCAGAT GATGTAAATCAACAAATTTA
Product: phosphoribosylformylglycinamidine synthase II
Products: NA
Alternate protein names: Phosphoribosylformylglycinamidine synthase II; FGAM synthase II [H]
Number of amino acids: Translated: 779; Mature: 779
Protein sequence:
>779_residues MINPDNNDLYDLNEALKVENLTINDYEEICKRLKRKPNRTELGMFGVMWSEHCCYRNSKPLLSNFPTKGKNILVGPGENA GVIDVGNNQKLVFKIESHNHPSAIEPFQGAATGVGGILRDIFTMGARPIAVLNSLRFGNLDKTSNMDLLRGVVSGIAHYG NCVGVPTVGGEIDFDDSYSGNPLVNVMALGLLETNEIVCSGAKNVGSPVLYVGNTTGRDGVGGASFASSELTITSLDDRP AVQVGDPFIEKSLIEACLDAFKTGDVIAAQDMGAAGLTCSSAEMAANGNLGISIDLDLVPSREDNMSSYQYLLSESQERM LFVVKEEKINNLIEKFNKWGLYANVIGEVIETNEVIISHKRKIVAQIPTSALSDDTPVNLHNVMKNPPNYLLKKWKWNEN NLPEINEQKIFSLKENKSFSYSEIILKLLANPSIASKRWIYKQYDSQVQANTVFKPGESDAAVIRLREQNEKNKSKVFSG VAASVDCNSRWVSLDPFRGTIAAVAESARNVSCVGAEPVAITNNLNFSSPETEIGYWQLSSSCNAISEACKALETPVTGG NVSLYNESKNRDNEITPINPTPVIGMVGKIDNVEKAISTEWKNINDQIWLIGSHKSETTIAASSYLEYFHGEITGRPPKI DLQDEKFCQSFLRNAILNNFVVSSHDISDGGLAIALAECCILSAKGATIELEKDLNRDDNVLFSEGGSRIIFSIDKMKEK EWSNYLKKIQINSQSNVYVKKIGYVSSEILKIKIQDKNICDISVEELTEKFNNSISGYF
Sequences:
>Translated_779_residues MINPDNNDLYDLNEALKVENLTINDYEEICKRLKRKPNRTELGMFGVMWSEHCCYRNSKPLLSNFPTKGKNILVGPGENA GVIDVGNNQKLVFKIESHNHPSAIEPFQGAATGVGGILRDIFTMGARPIAVLNSLRFGNLDKTSNMDLLRGVVSGIAHYG NCVGVPTVGGEIDFDDSYSGNPLVNVMALGLLETNEIVCSGAKNVGSPVLYVGNTTGRDGVGGASFASSELTITSLDDRP AVQVGDPFIEKSLIEACLDAFKTGDVIAAQDMGAAGLTCSSAEMAANGNLGISIDLDLVPSREDNMSSYQYLLSESQERM LFVVKEEKINNLIEKFNKWGLYANVIGEVIETNEVIISHKRKIVAQIPTSALSDDTPVNLHNVMKNPPNYLLKKWKWNEN NLPEINEQKIFSLKENKSFSYSEIILKLLANPSIASKRWIYKQYDSQVQANTVFKPGESDAAVIRLREQNEKNKSKVFSG VAASVDCNSRWVSLDPFRGTIAAVAESARNVSCVGAEPVAITNNLNFSSPETEIGYWQLSSSCNAISEACKALETPVTGG NVSLYNESKNRDNEITPINPTPVIGMVGKIDNVEKAISTEWKNINDQIWLIGSHKSETTIAASSYLEYFHGEITGRPPKI DLQDEKFCQSFLRNAILNNFVVSSHDISDGGLAIALAECCILSAKGATIELEKDLNRDDNVLFSEGGSRIIFSIDKMKEK EWSNYLKKIQINSQSNVYVKKIGYVSSEILKIKIQDKNICDISVEELTEKFNNSISGYF >Mature_779_residues MINPDNNDLYDLNEALKVENLTINDYEEICKRLKRKPNRTELGMFGVMWSEHCCYRNSKPLLSNFPTKGKNILVGPGENA GVIDVGNNQKLVFKIESHNHPSAIEPFQGAATGVGGILRDIFTMGARPIAVLNSLRFGNLDKTSNMDLLRGVVSGIAHYG NCVGVPTVGGEIDFDDSYSGNPLVNVMALGLLETNEIVCSGAKNVGSPVLYVGNTTGRDGVGGASFASSELTITSLDDRP AVQVGDPFIEKSLIEACLDAFKTGDVIAAQDMGAAGLTCSSAEMAANGNLGISIDLDLVPSREDNMSSYQYLLSESQERM LFVVKEEKINNLIEKFNKWGLYANVIGEVIETNEVIISHKRKIVAQIPTSALSDDTPVNLHNVMKNPPNYLLKKWKWNEN NLPEINEQKIFSLKENKSFSYSEIILKLLANPSIASKRWIYKQYDSQVQANTVFKPGESDAAVIRLREQNEKNKSKVFSG VAASVDCNSRWVSLDPFRGTIAAVAESARNVSCVGAEPVAITNNLNFSSPETEIGYWQLSSSCNAISEACKALETPVTGG NVSLYNESKNRDNEITPINPTPVIGMVGKIDNVEKAISTEWKNINDQIWLIGSHKSETTIAASSYLEYFHGEITGRPPKI DLQDEKFCQSFLRNAILNNFVVSSHDISDGGLAIALAECCILSAKGATIELEKDLNRDDNVLFSEGGSRIIFSIDKMKEK EWSNYLKKIQINSQSNVYVKKIGYVSSEILKIKIQDKNICDISVEELTEKFNNSISGYF
Specific function: Unknown
COG id: COG0046
COG function: function code F; Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the FGAMS family [H]
Homologues:
Organism=Escherichia coli, GI48994899, Length=783, Percent_Identity=22.3499361430396, Blast_Score=113, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17553022, Length=679, Percent_Identity=22.5331369661267, Blast_Score=91, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6321498, Length=818, Percent_Identity=22.9828850855746, Blast_Score=119, Evalue=2e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR010074 - InterPro: IPR016188 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =6.3.5.3 [H]
Molecular weight: Translated: 85621; Mature: 85621
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINPDNNDLYDLNEALKVENLTINDYEEICKRLKRKPNRTELGMFGVMWSEHCCYRNSKP CCCCCCCCCCCCCHHHEEECCEECCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCC LLSNFPTKGKNILVGPGENAGVIDVGNNQKLVFKIESHNHPSAIEPFQGAATGVGGILRD HHHCCCCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHH IFTMGARPIAVLNSLRFGNLDKTSNMDLLRGVVSGIAHYGNCVGVPTVGGEIDFDDSYSG HHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCEECCCCCCCC NPLVNVMALGLLETNEIVCSGAKNVGSPVLYVGNTTGRDGVGGASFASSELTITSLDDRP CCHHHHHHHHHEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCC AVQVGDPFIEKSLIEACLDAFKTGDVIAAQDMGAAGLTCSSAEMAANGNLGISIDLDLVP CEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCHHCCCCCEEEEEEEEECC SREDNMSSYQYLLSESQERMLFVVKEEKINNLIEKFNKWGLYANVIGEVIETNEVIISHK CCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEHHH RKIVAQIPTSALSDDTPVNLHNVMKNPPNYLLKKWKWNENNLPEINEQKIFSLKENKSFS HHHEECCCCHHCCCCCCCCHHHHHCCCHHHHHEEEECCCCCCCCCCCHHEEEECCCCCCC YSEIILKLLANPSIASKRWIYKQYDSQVQANTVFKPGESDAAVIRLREQNEKNKSKVFSG HHHHHHHHHCCCCCCHHHHHHHHHCCCEEECEEECCCCCCEEEEEEECCCCCHHHHHHHC VAASVDCNSRWVSLDPFRGTIAAVAESARNVSCVGAEPVAITNNLNFSSPETEIGYWQLS CEEEECCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEC SSCNAISEACKALETPVTGGNVSLYNESKNRDNEITPINPTPVIGMVGKIDNVEKAISTE CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH WKNINDQIWLIGSHKSETTIAASSYLEYFHGEITGRPPKIDLQDEKFCQSFLRNAILNNF HCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHC VVSSHDISDGGLAIALAECCILSAKGATIELEKDLNRDDNVLFSEGGSRIIFSIDKMKEK EEECCCCCCCCHHHHHHHHHHEECCCCEEEECCCCCCCCCEEEECCCCEEEEEHHHHHHH EWSNYLKKIQINSQSNVYVKKIGYVSSEILKIKIQDKNICDISVEELTEKFNNSISGYF HHHHHHHEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCC >Mature Secondary Structure MINPDNNDLYDLNEALKVENLTINDYEEICKRLKRKPNRTELGMFGVMWSEHCCYRNSKP CCCCCCCCCCCCCHHHEEECCEECCHHHHHHHHHCCCCCCCCCEEEHHHHHHHHCCCCCC LLSNFPTKGKNILVGPGENAGVIDVGNNQKLVFKIESHNHPSAIEPFQGAATGVGGILRD HHHCCCCCCCEEEECCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHH IFTMGARPIAVLNSLRFGNLDKTSNMDLLRGVVSGIAHYGNCVGVPTVGGEIDFDDSYSG HHHCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCEECCCCCCCC NPLVNVMALGLLETNEIVCSGAKNVGSPVLYVGNTTGRDGVGGASFASSELTITSLDDRP CCHHHHHHHHHEECCCEEEECCCCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCC AVQVGDPFIEKSLIEACLDAFKTGDVIAAQDMGAAGLTCSSAEMAANGNLGISIDLDLVP CEECCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEECCCHHCCCCCEEEEEEEEECC SREDNMSSYQYLLSESQERMLFVVKEEKINNLIEKFNKWGLYANVIGEVIETNEVIISHK CCCCCHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEHHH RKIVAQIPTSALSDDTPVNLHNVMKNPPNYLLKKWKWNENNLPEINEQKIFSLKENKSFS HHHEECCCCHHCCCCCCCCHHHHHCCCHHHHHEEEECCCCCCCCCCCHHEEEECCCCCCC YSEIILKLLANPSIASKRWIYKQYDSQVQANTVFKPGESDAAVIRLREQNEKNKSKVFSG HHHHHHHHHCCCCCCHHHHHHHHHCCCEEECEEECCCCCCEEEEEEECCCCCHHHHHHHC VAASVDCNSRWVSLDPFRGTIAAVAESARNVSCVGAEPVAITNNLNFSSPETEIGYWQLS CEEEECCCCCEEEECCCCHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCEEEEEEC SSCNAISEACKALETPVTGGNVSLYNESKNRDNEITPINPTPVIGMVGKIDNVEKAISTE CCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHH WKNINDQIWLIGSHKSETTIAASSYLEYFHGEITGRPPKIDLQDEKFCQSFLRNAILNNF HCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEECCCCCCCCCCHHHHHHHHHHHHHHHHC VVSSHDISDGGLAIALAECCILSAKGATIELEKDLNRDDNVLFSEGGSRIIFSIDKMKEK EEECCCCCCCCHHHHHHHHHHEECCCCEEEECCCCCCCCCEEEECCCCEEEEEHHHHHHH EWSNYLKKIQINSQSNVYVKKIGYVSSEILKIKIQDKNICDISVEELTEKFNNSISGYF HHHHHHHEEEECCCCCEEEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA