Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78358751
Identifier: 78358751
GI number: 78358751
Start: 3672624
End: 3673547
Strand: Direct
Name: 78358751
Synonym: Dde_3712
Alternate gene names: NA
Gene position: 3672624-3673547 (Clockwise)
Preceding gene: 78358750
Following gene: 78358752
Centisome position: 98.46
GC content: 58.01
Gene sequence:
>924_bases ATGTTCAAAAAAATCCTCTTCGCCACTTCTGCTTCTCCGGCCTGTGACAACGCGGCAAAAGTTGCTTTTGATCTGGCGCG GCGCAACGGTGCCAAACTGTATGTGTTCCATGTGATGGGCGTACCCAGCCGCGGCTTCAGCCACATGGTGCGTGACCTTC GCTCCGGCGAAGAAGAACACGCCGACGGCGATTACCGCGACTGGGTGGTGGAAGAACTGCAAAGCACCTACGCCGAACAG ATGGAAGGTTTTGAAAAAAACACCAGCATAGAACTGGCTGTAGGGGTGCCGCACACCGAAGTGCTGCGCTTTGCCCGCCA GAATGACGTGGATCTGATTGTCATGGGCGCAAACACGCGTGAAGACGATCCGGGCGCCGCACGCACACGCAGCATCATCG GCAACACCATGCAGCGCGTGGCCCGCGTGGCCCGCTGTCCGGTGCTTATTGTCAACCGTCCCTGCACCACCTGCTGGAAC CTGTTCTCGAACATCGTTTTCTGCACAGACTTCTCCAAAGCGGCGGATTCGGCATTCAAGTTTGCCCTGAGCGCCGCCAG AGAAGTGAACGCCCGGCTTTACCTCTTCCATGCGTTCGACATCAATGCGTCACGACTGGGGGTTTTTCCCGGTCAGGCAG AGCTGGAACGCACACTGGAAAAAGCCCACGCCCAGATGCAGGAACGCTACCTGAGCCACATGGGCGACTTTGACAACTAT CAGGTCGATATCTGGGAGGGCACTCCCTATGTCGAGATTCTGAAATACGCCAGAGAACGCAAGGCCGACCTTGTGGTCAT GGCGCATCACACCAAGGAAGTTAATCCCGACCAGGCCGAAATCGGCAGCACCGTAGAGCAGGTGGTACTGCGCTCGGCGT GTCCGGTGGCCAGCGTGGTGCATCCCGACAAAGTGGCGGCCTAG
Upstream 100 bases:
>100_bases CTGCGAAACCGCATTCAGCCTGTTCGACGTCATCGAAGGCATAGCCTGGGAGATAGGCTTCCAGGGTGGCTCCCAGCAAT GCAGCCTCAGGAGGTAGCAT
Downstream 100 bases:
>100_bases CCCTTCCGCGGGAGGCGGCCATGCCGCAGAACATTCTTGTTGTAGATGATGAAATGAGCTTCAGGTTTTACCTGAAGACG CTGTTCGAAACGGGCGGCTA
Product: universal stress protein
Products: NA
Alternate protein names: USP MJ0531 [H]
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MFKKILFATSASPACDNAAKVAFDLARRNGAKLYVFHVMGVPSRGFSHMVRDLRSGEEEHADGDYRDWVVEELQSTYAEQ MEGFEKNTSIELAVGVPHTEVLRFARQNDVDLIVMGANTREDDPGAARTRSIIGNTMQRVARVARCPVLIVNRPCTTCWN LFSNIVFCTDFSKAADSAFKFALSAAREVNARLYLFHAFDINASRLGVFPGQAELERTLEKAHAQMQERYLSHMGDFDNY QVDIWEGTPYVEILKYARERKADLVVMAHHTKEVNPDQAEIGSTVEQVVLRSACPVASVVHPDKVAA
Sequences:
>Translated_307_residues MFKKILFATSASPACDNAAKVAFDLARRNGAKLYVFHVMGVPSRGFSHMVRDLRSGEEEHADGDYRDWVVEELQSTYAEQ MEGFEKNTSIELAVGVPHTEVLRFARQNDVDLIVMGANTREDDPGAARTRSIIGNTMQRVARVARCPVLIVNRPCTTCWN LFSNIVFCTDFSKAADSAFKFALSAAREVNARLYLFHAFDINASRLGVFPGQAELERTLEKAHAQMQERYLSHMGDFDNY QVDIWEGTPYVEILKYARERKADLVVMAHHTKEVNPDQAEIGSTVEQVVLRSACPVASVVHPDKVAA >Mature_307_residues MFKKILFATSASPACDNAAKVAFDLARRNGAKLYVFHVMGVPSRGFSHMVRDLRSGEEEHADGDYRDWVVEELQSTYAEQ MEGFEKNTSIELAVGVPHTEVLRFARQNDVDLIVMGANTREDDPGAARTRSIIGNTMQRVARVARCPVLIVNRPCTTCWN LFSNIVFCTDFSKAADSAFKFALSAAREVNARLYLFHAFDINASRLGVFPGQAELERTLEKAHAQMQERYLSHMGDFDNY QVDIWEGTPYVEILKYARERKADLVVMAHHTKEVNPDQAEIGSTVEQVVLRSACPVASVVHPDKVAA
Specific function: Unknown
COG id: COG0589
COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the universal stress protein A family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014729 - InterPro: IPR006015 - InterPro: IPR006016 [H]
Pfam domain/function: PF00582 Usp [H]
EC number: NA
Molecular weight: Translated: 34361; Mature: 34361
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKILFATSASPACDNAAKVAFDLARRNGAKLYVFHVMGVPSRGFSHMVRDLRSGEEEH CCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCC ADGDYRDWVVEELQSTYAEQMEGFEKNTSIELAVGVPHTEVLRFARQNDVDLIVMGANTR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCC EDDPGAARTRSIIGNTMQRVARVARCPVLIVNRPCTTCWNLFSNIVFCTDFSKAADSAFK CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCEEEEECCHHHHHHHHH FALSAAREVNARLYLFHAFDINASRLGVFPGQAELERTLEKAHAQMQERYLSHMGDFDNY HHHHHHHHCCCEEEEEEEEECCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE QVDIWEGTPYVEILKYARERKADLVVMAHHTKEVNPDQAEIGSTVEQVVLRSACPVASVV EEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHCC HPDKVAA CCHHCCC >Mature Secondary Structure MFKKILFATSASPACDNAAKVAFDLARRNGAKLYVFHVMGVPSRGFSHMVRDLRSGEEEH CCCCEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHCCCCCC ADGDYRDWVVEELQSTYAEQMEGFEKNTSIELAVGVPHTEVLRFARQNDVDLIVMGANTR CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCC EDDPGAARTRSIIGNTMQRVARVARCPVLIVNRPCTTCWNLFSNIVFCTDFSKAADSAFK CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHCEEEEECCHHHHHHHHH FALSAAREVNARLYLFHAFDINASRLGVFPGQAELERTLEKAHAQMQERYLSHMGDFDNY HHHHHHHHCCCEEEEEEEEECCCHHEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCE QVDIWEGTPYVEILKYARERKADLVVMAHHTKEVNPDQAEIGSTVEQVVLRSACPVASVV EEEEECCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHCC HPDKVAA CCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]