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The map label for this gene is fliP

Identifier: 78358622

GI number: 78358622

Start: 3542237

End: 3542950

Strand: Reverse

Name: fliP

Synonym: Dde_3583

Alternate gene names: 78358622

Gene position: 3542950-3542237 (Counterclockwise)

Preceding gene: 78358623

Following gene: 78358621

Centisome position: 94.98

GC content: 56.58

Gene sequence:

>714_bases
ATGCCCGACGCGGCCATGGCCGCGCGCGATATTTCTCTGCCCGATATGCAGCTGACCCTTTCCGGCGGGGCCACAGAGCC
GGAAAAAGTCTCTGTAATTCTTGAAATTCTCTTTCTGCTCACGGTTCTTTCGCTGGCTCCGGCCATCATGCTTACCGTGA
CCAGCTTCACCCGCATCATCATCGTATTCCACTTTGTGCGTCAGGCCATGGGGCTGCCCACGCTGCCCCCCAACCAGGTG
CTGGCCAGTCTTGCCATCTTCATGACGGTGGTCATCATGATGCCCGTGGGCAAGGAAATCAATGACAGAGCGCTTCAGCC
GTATCTGGACGAGCGCATCGGCTTCAGGGAAGCCCTCACCGTGGCGCAGGAACCTCTGCGCGAATTCATGTTCAAACATA
CCCGCGAAAAAGACCTTTCCGTCTTTTACGGCATCACCGGCATGGAGCGTCCGCGCAACAAGGACGACGTGCCCACGGTC
ATGCTTGCAGCGGGCTATGTCATCAGCGAGCTGAAGACCGGCTTCACCATCGGGTTTCTCATCTATATTCCGTTTCTGGT
GCTGGATATGGTGGTGGCCTCCATCCTGCTGGCCATGGGCATGATGATGCTGCCCCCCATGATGGTTTCCATGCCGTTCA
AGATTCTGCTTTTTGTCATGGTGGACGGGTGGAGCCTGCTTACAACATCGCTGGTCAACAGCTTCATGCTCTGA

Upstream 100 bases:

>100_bases
TTTGCGGCGGTGCTGGACGAAGCCGGAGACGGGACGTAGGTCTGCTGTCACTCTGTTGACAGGGGCCGGTGTGCTGGCTG
CGGCGCTGGCCCTGCTGTGC

Downstream 100 bases:

>100_bases
CGGGTGCAGACGTAAACACAGAGGAGTCGGAATCATGACACCGGAATTTGTCGTCGGATTTGCGCGTCAGGCCATTGAAC
TGGCATTGACCATATCGTTG

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MPDAAMAARDISLPDMQLTLSGGATEPEKVSVILEILFLLTVLSLAPAIMLTVTSFTRIIIVFHFVRQAMGLPTLPPNQV
LASLAIFMTVVIMMPVGKEINDRALQPYLDERIGFREALTVAQEPLREFMFKHTREKDLSVFYGITGMERPRNKDDVPTV
MLAAGYVISELKTGFTIGFLIYIPFLVLDMVVASILLAMGMMMLPPMMVSMPFKILLFVMVDGWSLLTTSLVNSFML

Sequences:

>Translated_237_residues
MPDAAMAARDISLPDMQLTLSGGATEPEKVSVILEILFLLTVLSLAPAIMLTVTSFTRIIIVFHFVRQAMGLPTLPPNQV
LASLAIFMTVVIMMPVGKEINDRALQPYLDERIGFREALTVAQEPLREFMFKHTREKDLSVFYGITGMERPRNKDDVPTV
MLAAGYVISELKTGFTIGFLIYIPFLVLDMVVASILLAMGMMMLPPMMVSMPFKILLFVMVDGWSLLTTSLVNSFML
>Mature_236_residues
PDAAMAARDISLPDMQLTLSGGATEPEKVSVILEILFLLTVLSLAPAIMLTVTSFTRIIIVFHFVRQAMGLPTLPPNQVL
ASLAIFMTVVIMMPVGKEINDRALQPYLDERIGFREALTVAQEPLREFMFKHTREKDLSVFYGITGMERPRNKDDVPTVM
LAAGYVISELKTGFTIGFLIYIPFLVLDMVVASILLAMGMMMLPPMMVSMPFKILLFVMVDGWSLLTTSLVNSFML

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=216, Percent_Identity=49.537037037037, Blast_Score=208, Evalue=2e-55,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26370; Mature: 26239

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.9 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.5 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDAAMAARDISLPDMQLTLSGGATEPEKVSVILEILFLLTVLSLAPAIMLTVTSFTRII
CCCHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVFHFVRQAMGLPTLPPNQVLASLAIFMTVVIMMPVGKEINDRALQPYLDERIGFREALT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VAQEPLREFMFKHTREKDLSVFYGITGMERPRNKDDVPTVMLAAGYVISELKTGFTIGFL
HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
IYIPFLVLDMVVASILLAMGMMMLPPMMVSMPFKILLFVMVDGWSLLTTSLVNSFML
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDAAMAARDISLPDMQLTLSGGATEPEKVSVILEILFLLTVLSLAPAIMLTVTSFTRII
CCHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IVFHFVRQAMGLPTLPPNQVLASLAIFMTVVIMMPVGKEINDRALQPYLDERIGFREALT
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
VAQEPLREFMFKHTREKDLSVFYGITGMERPRNKDDVPTVMLAAGYVISELKTGFTIGFL
HHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHH
IYIPFLVLDMVVASILLAMGMMMLPPMMVSMPFKILLFVMVDGWSLLTTSLVNSFML
HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1597417; 9384377 [H]