| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is hisI
Identifier: 78358606
GI number: 78358606
Start: 3524546
End: 3524938
Strand: Reverse
Name: hisI
Synonym: Dde_3567
Alternate gene names: 78358606
Gene position: 3524938-3524546 (Counterclockwise)
Preceding gene: 78358607
Following gene: 78358605
Centisome position: 94.5
GC content: 55.47
Gene sequence:
>393_bases ATGACCGCAGACCTTCCCGATTTTGTTCCCGACTTTGAAAAAACGGGCGGCCTTGTTCCCGCCATCGCACAGGACGCCGT AAGCGGCGAAGTGCTGATGATGGCATGGATGAACGAGGAAGCATGGCACCGGACGCTTACCACCGGTGAAGCCCATTACT TCAGCCGCAGCCGTGGTTCGCTGTGGCATAAAGGCGGAACTTCGGGACATACCCAGCATATCAGGGCCGTGCGTCTTGAC TGCGACAGCGACACCATTCTGCTGCTCGTGGACCAGATAGGCGGCGCGGCCTGCCATAAAGGGTACAAAAGCTGTTTTTT CCGTGAACTGAAGGATGGCGAGATTTCCGTATGCTCGCCCTTGGTGTTCGACCCTGAAGAGGTATATAAATAA
Upstream 100 bases:
>100_bases TGAACCTGCTCCGGCCGCGTGGTGTACGCGGCCGCACCTTCTGTGTCCGGACACGCGCCGCGGAAATCCGCCATGCGCAT AACCAAGAGGATCACATGGA
Downstream 100 bases:
>100_bases TGTCTGCAGATACACATATCATCAAGCTCGGCCTGCCCAAAGGCTCTCTGGAACAGTCCACCATCAATCTGTTTGCCAAA TCCGGCTGGAAGATACGCCA
Product: phosphoribosyl-AMP cyclohydrolase
Products: NA
Alternate protein names: PRA-CH
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTADLPDFVPDFEKTGGLVPAIAQDAVSGEVLMMAWMNEEAWHRTLTTGEAHYFSRSRGSLWHKGGTSGHTQHIRAVRLD CDSDTILLLVDQIGGAACHKGYKSCFFRELKDGEISVCSPLVFDPEEVYK
Sequences:
>Translated_130_residues MTADLPDFVPDFEKTGGLVPAIAQDAVSGEVLMMAWMNEEAWHRTLTTGEAHYFSRSRGSLWHKGGTSGHTQHIRAVRLD CDSDTILLLVDQIGGAACHKGYKSCFFRELKDGEISVCSPLVFDPEEVYK >Mature_129_residues TADLPDFVPDFEKTGGLVPAIAQDAVSGEVLMMAWMNEEAWHRTLTTGEAHYFSRSRGSLWHKGGTSGHTQHIRAVRLDC DSDTILLLVDQIGGAACHKGYKSCFFRELKDGEISVCSPLVFDPEEVYK
Specific function: Histidine biosynthesis; second step. Histidine biosynthesis; third step. [C]
COG id: COG0139
COG function: function code E; Phosphoribosyl-AMP cyclohydrolase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PRA-CH family
Homologues:
Organism=Escherichia coli, GI2367128, Length=96, Percent_Identity=52.0833333333333, Blast_Score=105, Evalue=7e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS3_DESDG (Q30VD6)
Other databases:
- EMBL: CP000112 - RefSeq: YP_390055.1 - ProteinModelPortal: Q30VD6 - SMR: Q30VD6 - STRING: Q30VD6 - GeneID: 3758547 - GenomeReviews: CP000112_GR - KEGG: dde:Dde_3567 - NMPDR: fig|207559.3.peg.2399 - eggNOG: COG0139 - HOGENOM: HBG294308 - OMA: TQYVHEV - ProtClustDB: PRK00051 - BioCyc: DDES207559:DDE_3567-MONOMER - GO: GO:0005737 - HAMAP: MF_01021 - InterPro: IPR002496 - ProDom: PD002610
Pfam domain/function: PF01502 PRA-CH
EC number: =3.5.4.19
Molecular weight: Translated: 14403; Mature: 14272
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTADLPDFVPDFEKTGGLVPAIAQDAVSGEVLMMAWMNEEAWHRTLTTGEAHYFSRSRGS CCCCCCCCCCCHHHCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHCCCCCHHHHCCCCCC LWHKGGTSGHTQHIRAVRLDCDSDTILLLVDQIGGAACHKGYKSCFFRELKDGEISVCSP EEECCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEECCC LVFDPEEVYK CEECHHHHCC >Mature Secondary Structure TADLPDFVPDFEKTGGLVPAIAQDAVSGEVLMMAWMNEEAWHRTLTTGEAHYFSRSRGS CCCCCCCCCCHHHCCCCCCHHHHHCCCCCEEEEEECCCHHHHHHCCCCCHHHHCCCCCC LWHKGGTSGHTQHIRAVRLDCDSDTILLLVDQIGGAACHKGYKSCFFRELKDGEISVCSP EEECCCCCCCCCEEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEECCC LVFDPEEVYK CEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA