| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358533
Identifier: 78358533
GI number: 78358533
Start: 3453931
End: 3454971
Strand: Reverse
Name: 78358533
Synonym: Dde_3494
Alternate gene names: NA
Gene position: 3454971-3453931 (Counterclockwise)
Preceding gene: 78358534
Following gene: 78358529
Centisome position: 92.62
GC content: 57.06
Gene sequence:
>1041_bases ATGTCTTATTTTCGCAAGCTTGAACCGGGGCTTTCACAACTTCTCGAACTTTTTTCGCGCGATGAGCGCTGGCTTATTGT CATCAACGCCGATCCCGACGCCATGGCATCGGCCATGGCTCTGCGCCGCATCATGATTCACAGGGTGTCCGACGTGGGCA TAGCCCATGTGAACACCATATCACGGCCCGACAATCTGGCCATGGTGCGCTATCTGCACATTCCCATGGTCAAGTTCACC CCCACCGTGGCGGCGCAGTATGACCGGTTCGCCATGGTCGATTCTCAGCCCCATCATCATCCGGGGTTTTCCGGTGTGCA TTATTCCGTGGTGTTCGACCACCATCCCCTGAGCGAAGAGGAACCCGTCATTGCCGACTTCAAGGACCTGAAGCCGGAAT ACGGCACCTGTTCGGCACTGATGACCGAGTATCTGTACAATCTCAAGATACGCCCCGGAAAGCTGCTTGCCACCGCGCTG CTTTTCGGCATCAAGACGGATACAAACAGCTTCGAACGCGAATCCTGCGACATCGATATCCGCGCATTCCGGTATCTTTC CAAGTTTGCCAACCATCAGCTGCTCTCGCGCATCGCCCGCAGCGAATTTCGGCTGGAGTGGCTGGATTATTTTTCACGCG CGTTCACCAGCCTGCACACTGTGCGTTCCGGGCGATACGTGTATGTGGGCGAGGTGGACAACCCCGATGTGCTTGTGGTT ATTGCCGACTTTTTTACGCGGGTGCACGAAATCCGCTGGGCCGTGGTGGCCGGGGTGTACAAGGATACGCTGGTCATTAT TTTCCGCGGCGACGGTGTGGTGCGCAATCTGGGCAATTTTGCCAAGCTGCAGTTCGGCGATATCGGCTCTGCGGGGGGGC ACAAGACCATGGCCCGCGCCGAGGTGCCTTTGCAGCGTCTGGAGGGCAAGGATGTGGAAATGTTTGTTTTCAAGCGTCTG GTAAGCCCCCCGAAGCGCGTCCGCCCCAGAGAGGAAGAGCGTCAGGCTGATGCCGCAGGCAACGACAGGAAAAAAGAATG A
Upstream 100 bases:
>100_bases CATCAGAGAACTGGGAGCCCTCAACCAGACCGTGGCGGCGCTGGCCGACGAGGTATGCTTTATGGTTGCCGGTATTCCCA TGTATCTTAAGAGGCGCTAG
Downstream 100 bases:
>100_bases TACCCCGCCGCCCGCTTGCGGGCTGTGCAGGTGATGTTGTTTATATGGGAAAAGGCAGCCGGAGGCTGCCTTTTCCTGCA GGGATTGCGGATGGAGTCCG
Product: DHH family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 346; Mature: 345
Protein sequence:
>346_residues MSYFRKLEPGLSQLLELFSRDERWLIVINADPDAMASAMALRRIMIHRVSDVGIAHVNTISRPDNLAMVRYLHIPMVKFT PTVAAQYDRFAMVDSQPHHHPGFSGVHYSVVFDHHPLSEEEPVIADFKDLKPEYGTCSALMTEYLYNLKIRPGKLLATAL LFGIKTDTNSFERESCDIDIRAFRYLSKFANHQLLSRIARSEFRLEWLDYFSRAFTSLHTVRSGRYVYVGEVDNPDVLVV IADFFTRVHEIRWAVVAGVYKDTLVIIFRGDGVVRNLGNFAKLQFGDIGSAGGHKTMARAEVPLQRLEGKDVEMFVFKRL VSPPKRVRPREEERQADAAGNDRKKE
Sequences:
>Translated_346_residues MSYFRKLEPGLSQLLELFSRDERWLIVINADPDAMASAMALRRIMIHRVSDVGIAHVNTISRPDNLAMVRYLHIPMVKFT PTVAAQYDRFAMVDSQPHHHPGFSGVHYSVVFDHHPLSEEEPVIADFKDLKPEYGTCSALMTEYLYNLKIRPGKLLATAL LFGIKTDTNSFERESCDIDIRAFRYLSKFANHQLLSRIARSEFRLEWLDYFSRAFTSLHTVRSGRYVYVGEVDNPDVLVV IADFFTRVHEIRWAVVAGVYKDTLVIIFRGDGVVRNLGNFAKLQFGDIGSAGGHKTMARAEVPLQRLEGKDVEMFVFKRL VSPPKRVRPREEERQADAAGNDRKKE >Mature_345_residues SYFRKLEPGLSQLLELFSRDERWLIVINADPDAMASAMALRRIMIHRVSDVGIAHVNTISRPDNLAMVRYLHIPMVKFTP TVAAQYDRFAMVDSQPHHHPGFSGVHYSVVFDHHPLSEEEPVIADFKDLKPEYGTCSALMTEYLYNLKIRPGKLLATALL FGIKTDTNSFERESCDIDIRAFRYLSKFANHQLLSRIARSEFRLEWLDYFSRAFTSLHTVRSGRYVYVGEVDNPDVLVVI ADFFTRVHEIRWAVVAGVYKDTLVIIFRGDGVVRNLGNFAKLQFGDIGSAGGHKTMARAEVPLQRLEGKDVEMFVFKRLV SPPKRVRPREEERQADAAGNDRKKE
Specific function: Unknown
COG id: COG0618
COG function: function code R; Exopolyphosphatase-related proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RCK N-terminal domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR003156 - InterPro: IPR001667 - InterPro: IPR003148 [H]
Pfam domain/function: PF01368 DHH; PF02272 DHHA1; PF02254 TrkA_N [H]
EC number: NA
Molecular weight: Translated: 39605; Mature: 39474
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYFRKLEPGLSQLLELFSRDERWLIVINADPDAMASAMALRRIMIHRVSDVGIAHVNTI CCHHHHHCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECC SRPDNLAMVRYLHIPMVKFTPTVAAQYDRFAMVDSQPHHHPGFSGVHYSVVFDHHPLSEE CCCCCCEEEEHHHCCCEEECCHHHHHCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCC EPVIADFKDLKPEYGTCSALMTEYLYNLKIRPGKLLATALLFGIKTDTNSFERESCDIDI CCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH RAFRYLSKFANHQLLSRIARSEFRLEWLDYFSRAFTSLHTVRSGRYVYVGEVDNPDVLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEE IADFFTRVHEIRWAVVAGVYKDTLVIIFRGDGVVRNLGNFAKLQFGDIGSAGGHKTMARA HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCHHEEEECCCCCCCCCCHHHHH EVPLQRLEGKDVEMFVFKRLVSPPKRVRPREEERQADAAGNDRKKE HCCHHHHCCCCHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure SYFRKLEPGLSQLLELFSRDERWLIVINADPDAMASAMALRRIMIHRVSDVGIAHVNTI CHHHHHCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEEECC SRPDNLAMVRYLHIPMVKFTPTVAAQYDRFAMVDSQPHHHPGFSGVHYSVVFDHHPLSEE CCCCCCEEEEHHHCCCEEECCHHHHHCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCC EPVIADFKDLKPEYGTCSALMTEYLYNLKIRPGKLLATALLFGIKTDTNSFERESCDIDI CCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHH RAFRYLSKFANHQLLSRIARSEFRLEWLDYFSRAFTSLHTVRSGRYVYVGEVDNPDVLVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEE IADFFTRVHEIRWAVVAGVYKDTLVIIFRGDGVVRNLGNFAKLQFGDIGSAGGHKTMARA HHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCHHEEEECCCCCCCCCCHHHHH EVPLQRLEGKDVEMFVFKRLVSPPKRVRPREEERQADAAGNDRKKE HCCHHHHCCCCHHHHHHHHHHCCHHHCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]