| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is trpE [H]
Identifier: 78358523
GI number: 78358523
Start: 3444019
End: 3445452
Strand: Reverse
Name: trpE [H]
Synonym: Dde_3484
Alternate gene names: 78358523
Gene position: 3445452-3444019 (Counterclockwise)
Preceding gene: 78358524
Following gene: 78358522
Centisome position: 92.37
GC content: 61.44
Gene sequence:
>1434_bases ATGAACGTGAATCTCAGGCAATCGGCCCGCTGGATAGCCGCCGACGTGCAGACCCCCATCAGCCTTTTTCTGGGGCTGGT GGGCAACGGGCAGGGCATTCTGCTGGAAAGTGCCGAGGTGGACGGGCGCTGGGGCCGTTACAGTGTCATCGGTTTCAACT TTCTGCTGCGGCTCGGGTGCAGGGACGGCAAGCTGACAGTGGCTTCGCGCGATGCCCGTCTTGACTGCCTGAAAGAGCTG GAAGGCATGGATTTTACGGATGGTGTGCGTGCCGTGCAGGCCGCCGTCGACATTACACCGGCAAGCGGATTTGAAGACCT GCCGCCCATTACCCGCGGGCTGTACGGATACTTCGGGTACGGGGTGGCAGGCATGTTCGAACCGCATTTGCAGCGGGTTC TGCCGGTGCAGAGCGCGGAAGCATGTCTGGTGCTGCCCGGCACCGTGGTGCTGGTGGACCACCTGTACAACAGGTTGTGC CTGCTGAATCTGGCAGAAGGGTTTGTCATCCGCATGGACAGGGATGCCGTGGACAGAAAACCGGAGAATCCCGATGTGGG TCCCGTTGTCATGGTGCCGGACAAGGCGACGTTCATCCGCAATGTGGAGCGGGTGAAGGAGCTCATACGGCAGGGCGAGG CCATTCAGGTGGTGCTTTCCACGCGTTTTCAGGCTTCGTTCAAGGGCGATCCTTTTGTGCTGTACCGCCGGCTGCGCCAG ATCAATCCTTCTCCGTACATGTTTTTCATGCGTCTGCCCGGCGTCAGTGTGCTGGGGTCGTCTCCGGAGGTGCTGGTCCG CTGCAGGGGCGGCGAAGTGCAGGTCTGCCCCATAGCCGGTACCAGACCGCGGGGCAGCGATGAGGCGGAAGACATACGGC TGGCCGAAGAGCTGCGCAACGACTCCAAGGAGCAGGCGGAGCATGTGATGCTGGTCGATCTGGGACGTAATGACCTGGGC CGCATTGCAGAGGCAGGCACCGTAAGTGTTGAAAAGTACATGCAGGTCGAACGGTTTTCCCACGTCATGCACCTTACTTC CTATGTCAGGGCGCGGCTGGCCGCAGGCAGGGACGCTCTGGATGTGCTGGCGGCCACGTTTCCGGCGGGAACGGTGAGCG GTGCGCCCAAGGTGCGTGCCATGGAGATCATAGCGGACATGGAAGGGCTGGCCCGCGGTCCTTACGCCGGTGCCATAGGC TGGCTGGGACTGGACAGCGGCAGTGTGGACATGGACACGGGCATTCTCATCCGTTCCATGTGGGTGCGCGACGGCATGGT CAGCTGGCAGGCGGGAGCAGGCATCGTCTACGACTCGGTGCCCGAAAAAGAATGGGAAGAGTGCTGCAACAAGGCCAGAG TGGTGCGTTCGGCCATCACGGGTACGCATGGCGGCGGATCAACGGGAGACTGCGATGTTTTTGCTTATCGATAA
Upstream 100 bases:
>100_bases CGATATGTGCAACAGTTTGGTTGATACCAAGGCCGCATCCTCCCCGGATGCGGCCTTTTTTGTTTTTACCGCCGGAACCA CCGCAAAGGAGCACAAGACA
Downstream 100 bases:
>100_bases CTACGATTCGTTCACCTTTAATCTGGTGCAGGCCTTCAGCAAAGGCGGGCTTACTCCGCAGGTGCGCAAAAATGACGACC CTGAACTGCCCGCGCTGGCA
Product: anthranilate synthase, component I
Products: NA
Alternate protein names: Anthranilate synthase component I [H]
Number of amino acids: Translated: 477; Mature: 477
Protein sequence:
>477_residues MNVNLRQSARWIAADVQTPISLFLGLVGNGQGILLESAEVDGRWGRYSVIGFNFLLRLGCRDGKLTVASRDARLDCLKEL EGMDFTDGVRAVQAAVDITPASGFEDLPPITRGLYGYFGYGVAGMFEPHLQRVLPVQSAEACLVLPGTVVLVDHLYNRLC LLNLAEGFVIRMDRDAVDRKPENPDVGPVVMVPDKATFIRNVERVKELIRQGEAIQVVLSTRFQASFKGDPFVLYRRLRQ INPSPYMFFMRLPGVSVLGSSPEVLVRCRGGEVQVCPIAGTRPRGSDEAEDIRLAEELRNDSKEQAEHVMLVDLGRNDLG RIAEAGTVSVEKYMQVERFSHVMHLTSYVRARLAAGRDALDVLAATFPAGTVSGAPKVRAMEIIADMEGLARGPYAGAIG WLGLDSGSVDMDTGILIRSMWVRDGMVSWQAGAGIVYDSVPEKEWEECCNKARVVRSAITGTHGGGSTGDCDVFAYR
Sequences:
>Translated_477_residues MNVNLRQSARWIAADVQTPISLFLGLVGNGQGILLESAEVDGRWGRYSVIGFNFLLRLGCRDGKLTVASRDARLDCLKEL EGMDFTDGVRAVQAAVDITPASGFEDLPPITRGLYGYFGYGVAGMFEPHLQRVLPVQSAEACLVLPGTVVLVDHLYNRLC LLNLAEGFVIRMDRDAVDRKPENPDVGPVVMVPDKATFIRNVERVKELIRQGEAIQVVLSTRFQASFKGDPFVLYRRLRQ INPSPYMFFMRLPGVSVLGSSPEVLVRCRGGEVQVCPIAGTRPRGSDEAEDIRLAEELRNDSKEQAEHVMLVDLGRNDLG RIAEAGTVSVEKYMQVERFSHVMHLTSYVRARLAAGRDALDVLAATFPAGTVSGAPKVRAMEIIADMEGLARGPYAGAIG WLGLDSGSVDMDTGILIRSMWVRDGMVSWQAGAGIVYDSVPEKEWEECCNKARVVRSAITGTHGGGSTGDCDVFAYR >Mature_477_residues MNVNLRQSARWIAADVQTPISLFLGLVGNGQGILLESAEVDGRWGRYSVIGFNFLLRLGCRDGKLTVASRDARLDCLKEL EGMDFTDGVRAVQAAVDITPASGFEDLPPITRGLYGYFGYGVAGMFEPHLQRVLPVQSAEACLVLPGTVVLVDHLYNRLC LLNLAEGFVIRMDRDAVDRKPENPDVGPVVMVPDKATFIRNVERVKELIRQGEAIQVVLSTRFQASFKGDPFVLYRRLRQ INPSPYMFFMRLPGVSVLGSSPEVLVRCRGGEVQVCPIAGTRPRGSDEAEDIRLAEELRNDSKEQAEHVMLVDLGRNDLG RIAEAGTVSVEKYMQVERFSHVMHLTSYVRARLAAGRDALDVLAATFPAGTVSGAPKVRAMEIIADMEGLARGPYAGAIG WLGLDSGSVDMDTGILIRSMWVRDGMVSWQAGAGIVYDSVPEKEWEECCNKARVVRSAITGTHGGGSTGDCDVFAYR
Specific function: Tryptophan biosynthesis; first step. [C]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1787518, Length=377, Percent_Identity=38.7267904509284, Blast_Score=219, Evalue=3e-58, Organism=Escherichia coli, GI1788114, Length=432, Percent_Identity=34.4907407407407, Blast_Score=212, Evalue=5e-56, Organism=Escherichia coli, GI87082077, Length=271, Percent_Identity=30.9963099630996, Blast_Score=102, Evalue=6e-23, Organism=Escherichia coli, GI1786809, Length=260, Percent_Identity=28.4615384615385, Blast_Score=89, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6320935, Length=454, Percent_Identity=36.1233480176211, Blast_Score=246, Evalue=8e-66, Organism=Saccharomyces cerevisiae, GI6324361, Length=394, Percent_Identity=26.3959390862944, Blast_Score=124, Evalue=3e-29,
Paralogues:
None
Copy number: 700 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR005256 - InterPro: IPR015890 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =4.1.3.27 [H]
Molecular weight: Translated: 52185; Mature: 52185
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVNLRQSARWIAADVQTPISLFLGLVGNGQGILLESAEVDGRWGRYSVIGFNFLLRLGC CCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHCCC RDGKLTVASRDARLDCLKELEGMDFTDGVRAVQAAVDITPASGFEDLPPITRGLYGYFGY CCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH GVAGMFEPHLQRVLPVQSAEACLVLPGTVVLVDHLYNRLCLLNLAEGFVIRMDRDAVDRK CHHHHCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCC PENPDVGPVVMVPDKATFIRNVERVKELIRQGEAIQVVLSTRFQASFKGDPFVLYRRLRQ CCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHH INPSPYMFFMRLPGVSVLGSSPEVLVRCRGGEVQVCPIAGTRPRGSDEAEDIRLAEELRN CCCCCEEEEEECCCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHC DSKEQAEHVMLVDLGRNDLGRIAEAGTVSVEKYMQVERFSHVMHLTSYVRARLAAGRDAL CCHHHHCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH DVLAATFPAGTVSGAPKVRAMEIIADMEGLARGPYAGAIGWLGLDSGSVDMDTGILIRSM HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHH WVRDGMVSWQAGAGIVYDSVPEKEWEECCNKARVVRSAITGTHGGGSTGDCDVFAYR HHHCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MNVNLRQSARWIAADVQTPISLFLGLVGNGQGILLESAEVDGRWGRYSVIGFNFLLRLGC CCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEHHHHHHHCCC RDGKLTVASRDARLDCLKELEGMDFTDGVRAVQAAVDITPASGFEDLPPITRGLYGYFGY CCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH GVAGMFEPHLQRVLPVQSAEACLVLPGTVVLVDHLYNRLCLLNLAEGFVIRMDRDAVDRK CHHHHCCHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCHHHCCC PENPDVGPVVMVPDKATFIRNVERVKELIRQGEAIQVVLSTRFQASFKGDPFVLYRRLRQ CCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHHHH INPSPYMFFMRLPGVSVLGSSPEVLVRCRGGEVQVCPIAGTRPRGSDEAEDIRLAEELRN CCCCCEEEEEECCCCEEECCCCCEEEEECCCCEEEEECCCCCCCCCCCHHHHHHHHHHHC DSKEQAEHVMLVDLGRNDLGRIAEAGTVSVEKYMQVERFSHVMHLTSYVRARLAAGRDAL CCHHHHCEEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH DVLAATFPAGTVSGAPKVRAMEIIADMEGLARGPYAGAIGWLGLDSGSVDMDTGILIRSM HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHH WVRDGMVSWQAGAGIVYDSVPEKEWEECCNKARVVRSAITGTHGGGSTGDCDVFAYR HHHCCCCEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]