| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is trpGD [H]
Identifier: 78358522
GI number: 78358522
Start: 3443433
End: 3444038
Strand: Reverse
Name: trpGD [H]
Synonym: Dde_3483
Alternate gene names: 78358522
Gene position: 3444038-3443433 (Counterclockwise)
Preceding gene: 78358523
Following gene: 78358521
Centisome position: 92.33
GC content: 62.21
Gene sequence:
>606_bases ATGTTTTTGCTTATCGATAACTACGATTCGTTCACCTTTAATCTGGTGCAGGCCTTCAGCAAAGGCGGGCTTACTCCGCA GGTGCGCAAAAATGACGACCCTGAACTGCCCGCGCTGGCACAAAGCGGGACACTGACCATGGTGTGCATTTCTCCCGGGC CGGGCAATCCGGCGGGGGCAGGACTGTGCCTTGAATTTCTGGACAGGCTGCCCCGCCATGTGCCGGTACTGGGCGTGTGT CTGGGCCATCAGGTGCTGGGCGCCTATGCCGGTGCCGCGGTGGAAGTTGGGCCGCGTATCATGCACGGCAAGGCATCCCG CGTTGTCCATCAGGGCACGGGCCTGTTCGAGGGTGTGTGCAACCCCATGACTGTGGGCCGGTATCATTCGCTGGTTGTGC GTGCGGAACAGTGCCCCGGCACGCTCGAAGTGCTGGCAGTCACAGACGCGGCGGTGGATGACGGGTGTGTGATGGCCATG CGTTATCGCGACAGGCCGTGGATGGGGGTGCAGTTCCATCCCGAGTCCGTTCTGACCCCGCAGGGTGAAACCCTGTTGCA AAACTTCTGCCGCATGGCGACTGCCTGCACGGCCGGGGCCGTGTGA
Upstream 100 bases:
>100_bases TCGGTGCCCGAAAAAGAATGGGAAGAGTGCTGCAACAAGGCCAGAGTGGTGCGTTCGGCCATCACGGGTACGCATGGCGG CGGATCAACGGGAGACTGCG
Downstream 100 bases:
>100_bases ATACGAGGTAAAAAGACAATGCATACTGCAGAAATACTGGAAACACTGGCTTCGGGCGGCGTGCTGCCGCCCGAAACGGC ACACATGGCGTTTGACAGAC
Product: anthranilate synthase, component II
Products: NA
Alternate protein names: Glutamine amidotransferase; Anthranilate phosphoribosyltransferase [H]
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MFLLIDNYDSFTFNLVQAFSKGGLTPQVRKNDDPELPALAQSGTLTMVCISPGPGNPAGAGLCLEFLDRLPRHVPVLGVC LGHQVLGAYAGAAVEVGPRIMHGKASRVVHQGTGLFEGVCNPMTVGRYHSLVVRAEQCPGTLEVLAVTDAAVDDGCVMAM RYRDRPWMGVQFHPESVLTPQGETLLQNFCRMATACTAGAV
Sequences:
>Translated_201_residues MFLLIDNYDSFTFNLVQAFSKGGLTPQVRKNDDPELPALAQSGTLTMVCISPGPGNPAGAGLCLEFLDRLPRHVPVLGVC LGHQVLGAYAGAAVEVGPRIMHGKASRVVHQGTGLFEGVCNPMTVGRYHSLVVRAEQCPGTLEVLAVTDAAVDDGCVMAM RYRDRPWMGVQFHPESVLTPQGETLLQNFCRMATACTAGAV >Mature_201_residues MFLLIDNYDSFTFNLVQAFSKGGLTPQVRKNDDPELPALAQSGTLTMVCISPGPGNPAGAGLCLEFLDRLPRHVPVLGVC LGHQVLGAYAGAAVEVGPRIMHGKASRVVHQGTGLFEGVCNPMTVGRYHSLVVRAEQCPGTLEVLAVTDAAVDDGCVMAM RYRDRPWMGVQFHPESVLTPQGETLLQNFCRMATACTAGAV
Specific function: Catalyzes The Biosynthesis Of 4-Amino-4-Deoxychorismate (Adc) From Chorismate And Glutamine. [C]
COG id: COG0512
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1789760, Length=189, Percent_Identity=43.9153439153439, Blast_Score=156, Evalue=1e-39, Organism=Escherichia coli, GI1787517, Length=190, Percent_Identity=40.5263157894737, Blast_Score=131, Evalue=2e-32, Organism=Saccharomyces cerevisiae, GI6322638, Length=192, Percent_Identity=35.4166666666667, Blast_Score=125, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6324361, Length=213, Percent_Identity=30.0469483568075, Blast_Score=79, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005940 - InterPro: IPR006220 - InterPro: IPR001317 - InterPro: IPR011702 - InterPro: IPR017926 - InterPro: IPR000991 - InterPro: IPR000312 - InterPro: IPR017459 - InterPro: IPR020072 - InterPro: IPR006221 [H]
Pfam domain/function: PF00117 GATase; PF02885 Glycos_trans_3N; PF00591 Glycos_transf_3 [H]
EC number: =4.1.3.27; =2.4.2.18 [H]
Molecular weight: Translated: 21426; Mature: 21426
Theoretical pI: Translated: 6.49; Mature: 6.49
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 8.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLLIDNYDSFTFNLVQAFSKGGLTPQVRKNDDPELPALAQSGTLTMVCISPGPGNPAGA CEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCHH GLCLEFLDRLPRHVPVLGVCLGHQVLGAYAGAAVEVGPRIMHGKASRVVHQGTGLFEGVC HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHCCCCHHHHCC NPMTVGRYHSLVVRAEQCPGTLEVLAVTDAAVDDGCVMAMRYRDRPWMGVQFHPESVLTP CCCCCCCHHEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCC QGETLLQNFCRMATACTAGAV CCHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFLLIDNYDSFTFNLVQAFSKGGLTPQVRKNDDPELPALAQSGTLTMVCISPGPGNPAGA CEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCHH GLCLEFLDRLPRHVPVLGVCLGHQVLGAYAGAAVEVGPRIMHGKASRVVHQGTGLFEGVC HHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCEECCCCCCCCCHHHHHHCCCCHHHHCC NPMTVGRYHSLVVRAEQCPGTLEVLAVTDAAVDDGCVMAMRYRDRPWMGVQFHPESVLTP CCCCCCCHHEEEEECCCCCCEEEEEEEECCCCCCCEEEEEEECCCCCCCEEECCCCCCCC QGETLLQNFCRMATACTAGAV CCHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7685830; 10360571; 7556082 [H]