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The map label for this gene is insC1 [C]

Identifier: 78358402

GI number: 78358402

Start: 3334690

End: 3334977

Strand: Reverse

Name: insC1 [C]

Synonym: Dde_3362

Alternate gene names: 78358402

Gene position: 3334977-3334690 (Counterclockwise)

Preceding gene: 78358404

Following gene: 78358401

Centisome position: 89.4

GC content: 52.78

Gene sequence:

>288_bases
ATGTCCAAGAAGAGAAGAAAGTTTACCGCCGAGTTCAAGACCCGCGTCGCCCTGGACGCTTTGTCCGGCGAGCACACCCT
TTCCGAGATCGCCAGCAAGTATGGCGTTCATCCCAATCAGGTTTCCCAGTGGAAAAAGCAGGCCAAAGAAGGCATTGCTG
CTTCCTTTTCAGGCAAGGCCCAGAAAGTCCAGCAAAGCGATGAGGCCCGGATCAAGGAACTGCACGCCAAGATCGGCCAA
CTCACTGTGGAGAAGGATTTTTTACAACAAGCCTTCGCCAAAATCTGA

Upstream 100 bases:

>100_bases
ATAACCGGCTCCAGCTTTGCCGTATTTAGCCATGAGAAGTGGGTTCGGAAAACTGGACCAGTAGCTAAGGTGGACATATA
AGAGCCGAAGGAGGCCCTTG

Downstream 100 bases:

>100_bases
GCCATGAGCGAAGGCGGGAGATCGTCGACAAGGGCCATCCTGCGCTCAGTGTTCGGCGGCAGTGCGAAGCCCTGAAGCTG
CACCGCTCAACGTATTACTA

Product: transposase (class V)

Products: NA

Alternate protein names: Transposase IS3/IS; Transposase InsN For Insertion Sequence Element IS; Transposase Family Protein; Integrase Catalytic Region; Transposase Subfamily; Transposase IS3 Family Protein; Transposase IS3 Family

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSKKRRKFTAEFKTRVALDALSGEHTLSEIASKYGVHPNQVSQWKKQAKEGIAASFSGKAQKVQQSDEARIKELHAKIGQ
LTVEKDFLQQAFAKI

Sequences:

>Translated_95_residues
MSKKRRKFTAEFKTRVALDALSGEHTLSEIASKYGVHPNQVSQWKKQAKEGIAASFSGKAQKVQQSDEARIKELHAKIGQ
LTVEKDFLQQAFAKI
>Mature_94_residues
SKKRRKFTAEFKTRVALDALSGEHTLSEIASKYGVHPNQVSQWKKQAKEGIAASFSGKAQKVQQSDEARIKELHAKIGQL
TVEKDFLQQAFAKI

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2963

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10658; Mature: 10527

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKRRKFTAEFKTRVALDALSGEHTLSEIASKYGVHPNQVSQWKKQAKEGIAASFSGKA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCHH
QKVQQSDEARIKELHAKIGQLTVEKDFLQQAFAKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SKKRRKFTAEFKTRVALDALSGEHTLSEIASKYGVHPNQVSQWKKQAKEGIAASFSGKA
CCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHCCCCHH
QKVQQSDEARIKELHAKIGQLTVEKDFLQQAFAKI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA