Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78358384
Identifier: 78358384
GI number: 78358384
Start: 3324577
End: 3325125
Strand: Reverse
Name: 78358384
Synonym: Dde_3344
Alternate gene names: NA
Gene position: 3325125-3324577 (Counterclockwise)
Preceding gene: 304570593
Following gene: 78358380
Centisome position: 89.14
GC content: 49.0
Gene sequence:
>549_bases ATGGTTACACTGCTTTCAATAGTTGGGCATATCGCATTTTTTGCCTTTCTAATCGGTATGATACGTCCTCAACTCGTTAT TTGGTGGGGGCGCCGCAGCCGTAGGGACGTTTTAGTTCTTTACCTGTCACTCTTTATTGCGTCAGCTGCCGGGGCGAAAC TGTTTGCTGATAGCAGCCATGATGAGGGACAGGAGTATCTCGCCCAATTGCAAAAAGAAGCCGCAGAAGCAAGAAAAGAA CGTGGTGAAGCGGTAGCGCCGCCTGCAAGTGTAGTTTCTGCAGAGGCGACACCTAGTGCGGCCTCTGAAAAAACGTTTGC TCCCGGTAATGCAAAGCAGCAATGGGGAATGATGAATATAACCGCGGGCTCACAAATGGGGCTCGACACATTGTCGCAAG AATTAGGGAGATTTGAGGAAGTGAAGGTGACAAGGTATAATCCAGCAATCATCAAAGCCTATTACTTCCGTGAGGCTGAT ATAACGGTGTATCTCAATGTTGGACAGCATGTGATTTCGCACTGGCGGTTAGGCCGAGCCAGCGAATAG
Upstream 100 bases:
>100_bases CAAGTAAAATAGAGACGCAGGTTTTTGTAAGTATTATACAGGCCAATGCCTATTGTAGCAACATCTTGATAGTTGAGAAC ATTTCACGACGGGAGGGGCA
Downstream 100 bases:
>100_bases ATTTTTCTCATTTCGAAAGTACAAAAAGGGTGCAATCCAGAGATTTTTCTCATTTTGGATTTCACCCTTTGTTTTGCCCA GGCGGCCACGCTCCGTCTAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MVTLLSIVGHIAFFAFLIGMIRPQLVIWWGRRSRRDVLVLYLSLFIASAAGAKLFADSSHDEGQEYLAQLQKEAAEARKE RGEAVAPPASVVSAEATPSAASEKTFAPGNAKQQWGMMNITAGSQMGLDTLSQELGRFEEVKVTRYNPAIIKAYYFREAD ITVYLNVGQHVISHWRLGRASE
Sequences:
>Translated_182_residues MVTLLSIVGHIAFFAFLIGMIRPQLVIWWGRRSRRDVLVLYLSLFIASAAGAKLFADSSHDEGQEYLAQLQKEAAEARKE RGEAVAPPASVVSAEATPSAASEKTFAPGNAKQQWGMMNITAGSQMGLDTLSQELGRFEEVKVTRYNPAIIKAYYFREAD ITVYLNVGQHVISHWRLGRASE >Mature_182_residues MVTLLSIVGHIAFFAFLIGMIRPQLVIWWGRRSRRDVLVLYLSLFIASAAGAKLFADSSHDEGQEYLAQLQKEAAEARKE RGEAVAPPASVVSAEATPSAASEKTFAPGNAKQQWGMMNITAGSQMGLDTLSQELGRFEEVKVTRYNPAIIKAYYFREAD ITVYLNVGQHVISHWRLGRASE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20131; Mature: 20131
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTLLSIVGHIAFFAFLIGMIRPQLVIWWGRRSRRDVLVLYLSLFIASAAGAKLFADSSH CHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCC DEGQEYLAQLQKEAAEARKERGEAVAPPASVVSAEATPSAASEKTFAPGNAKQQWGMMNI CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEE TAGSQMGLDTLSQELGRFEEVKVTRYNPAIIKAYYFREADITVYLNVGQHVISHWRLGRA CCCCCCCHHHHHHHHCCHHHEEEEECCCCEEEEEEEEECCEEEEEECHHHHHHHHCCCCC SE CC >Mature Secondary Structure MVTLLSIVGHIAFFAFLIGMIRPQLVIWWGRRSRRDVLVLYLSLFIASAAGAKLFADSSH CHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCC DEGQEYLAQLQKEAAEARKERGEAVAPPASVVSAEATPSAASEKTFAPGNAKQQWGMMNI CCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHCCEEEE TAGSQMGLDTLSQELGRFEEVKVTRYNPAIIKAYYFREADITVYLNVGQHVISHWRLGRA CCCCCCCHHHHHHHHCCHHHEEEEECCCCEEEEEEEEECCEEEEEECHHHHHHHHCCCCC SE CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA