| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78358355
Identifier: 78358355
GI number: 78358355
Start: 3299946
End: 3301487
Strand: Reverse
Name: 78358355
Synonym: Dde_3315
Alternate gene names: NA
Gene position: 3301487-3299946 (Counterclockwise)
Preceding gene: 78358356
Following gene: 78358354
Centisome position: 88.51
GC content: 52.01
Gene sequence:
>1542_bases ATGGAGACAACGATGGCTGCTTTTTTTCCTCGCCATGCCGACGGGCGGCAGGTTTTTTTTACGGGCCTGCTGATTGCTCT GGGCGCTGTGCTGTATCACTGCATTCTGGTGCAGCCCATCGACCACGGGGGCGACGCACTTTTCAAGTGGCAGGTGCACA GGCAGATGCTTGCTCTGGGCGCCATTCCGCCGCAGTTTTATGAAAATCCGGCCCATATGCTGCGCTGGGCCAGCAATCTT CCGGTTCTGGGCGTGCAATGGCTTTTTGATTCGCATCCCAGTTCGTATTTTTTGTGTCCTGTACTTATCGCGGCAGGCAA CGCCGTGTGGTGTTTTGTGCTGGGGCGCAGACTGGGCGGTCAGGCTGCGGGCATTCTGACGGCGCTGGCCTTTACCGCTG CGCAGACAACACTGCACTGGGGTACGCAGTTTCTGCCCATGAGCACCGCTACATTTTTTATGCTGGGGGCGTTGTGGTTC CTGCTGCGGTGGATGGAACGGGAACACTATTCTGACCTGCTGGCGTGCAGCGTGATGTTTTTTGTTTCCTACGGCGCAAA GGTTACAGCAATCTATTATGTGCCGGCCATATGCATTCTGCTCGTGTACCATGTGCGCTCAAAGGGAAACAGCTTCAGGG ACGCTGTGCCGCATGTAGGTACTTTTCTCGGAGTCCTTGTTCTGCTTTTCTGCATTGAAACAGTTCTGATAAGCAGCTTT ACGTCAATTTCCGGCGGACGCTTTGCCGGTATTCTGGCAGGGCATAATCCGTCTGTATGGGACAAGGATATTTTTGCGGC ACAGGATGCCAGATGGTATGATCCGCTTATCGGAATATACAGGGACTGGCGGCCCTCATCAAAATCGCTCTTGCAATACA TCGGCAATTTTTTTGTGTATACGCGTCATCCGGGCAAAACCCAGAGTATTACGTATTACGCGGCATTCATTCTTTGCGTG TATGCGTTGCGGACCCGCAAAAAAACGTATTATCCGGCTGTTGCCATATATCTGTCGGGTTTTTTTGCCAGTGCCTACGC CATAGTGTCGGTTTTTCCCTTTGTGCGTCCCGAGCGGGTACTGTTCCGCTACCACACTATTTTTTACACACTCGGCCAGA TGATGGTAATCAGCTTTCTGCTGCATACGCGTTTCCCTCTGATTGCCAGATATTGCAAGTGGTTTAAGGACAGTTATGTC CGGCCGCTCAGGGTCGTGCTGCTTCTGGCTTTTTTTGCCCCTCTGGCGGTTGAAGCTGTAAAATACTTTCCGGTTCCCAA CAGCATCATAGCCGCTGCGGATGCGTACGACACAGTACAGCAAGCACGCGGCGAAGGGCGCGATGTATTTATTCCGGTAC ATAAGTGGCCGGAAAGAACAGAAAAGCTGCAATGGAAGTATGTGGCGTTTTACAGCGACCTGAAGCGGGTTCCACCTCCG TATTCTGAAGAGACTCCGCATATTGTTGTCAACGGGCAGCGTTATTTTCGTGTGGAAGAAGGTACAACCCGCGAAAATCC CATACTTCTTGATCATTACTGA
Upstream 100 bases:
>100_bases CGCCGGACAGCTTTGAAAAACAGCTGGCAGGTCCGGGTTGGCGAGCTGGAAGACCTGCTCACCGGCAGTATTGCCGGCTG TCAGGCATCTTAGGGAACTC
Downstream 100 bases:
>100_bases CCATAACTGCCGGTGACGGCTGTCTGCCGCCGCCGGTAACGGGGCATTTCCGGATACCTCATCTGTCCGGTACCGTGTAC ATGCTTCCCCCGGCCATCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues METTMAAFFPRHADGRQVFFTGLLIALGAVLYHCILVQPIDHGGDALFKWQVHRQMLALGAIPPQFYENPAHMLRWASNL PVLGVQWLFDSHPSSYFLCPVLIAAGNAVWCFVLGRRLGGQAAGILTALAFTAAQTTLHWGTQFLPMSTATFFMLGALWF LLRWMEREHYSDLLACSVMFFVSYGAKVTAIYYVPAICILLVYHVRSKGNSFRDAVPHVGTFLGVLVLLFCIETVLISSF TSISGGRFAGILAGHNPSVWDKDIFAAQDARWYDPLIGIYRDWRPSSKSLLQYIGNFFVYTRHPGKTQSITYYAAFILCV YALRTRKKTYYPAVAIYLSGFFASAYAIVSVFPFVRPERVLFRYHTIFYTLGQMMVISFLLHTRFPLIARYCKWFKDSYV RPLRVVLLLAFFAPLAVEAVKYFPVPNSIIAAADAYDTVQQARGEGRDVFIPVHKWPERTEKLQWKYVAFYSDLKRVPPP YSEETPHIVVNGQRYFRVEEGTTRENPILLDHY
Sequences:
>Translated_513_residues METTMAAFFPRHADGRQVFFTGLLIALGAVLYHCILVQPIDHGGDALFKWQVHRQMLALGAIPPQFYENPAHMLRWASNL PVLGVQWLFDSHPSSYFLCPVLIAAGNAVWCFVLGRRLGGQAAGILTALAFTAAQTTLHWGTQFLPMSTATFFMLGALWF LLRWMEREHYSDLLACSVMFFVSYGAKVTAIYYVPAICILLVYHVRSKGNSFRDAVPHVGTFLGVLVLLFCIETVLISSF TSISGGRFAGILAGHNPSVWDKDIFAAQDARWYDPLIGIYRDWRPSSKSLLQYIGNFFVYTRHPGKTQSITYYAAFILCV YALRTRKKTYYPAVAIYLSGFFASAYAIVSVFPFVRPERVLFRYHTIFYTLGQMMVISFLLHTRFPLIARYCKWFKDSYV RPLRVVLLLAFFAPLAVEAVKYFPVPNSIIAAADAYDTVQQARGEGRDVFIPVHKWPERTEKLQWKYVAFYSDLKRVPPP YSEETPHIVVNGQRYFRVEEGTTRENPILLDHY >Mature_513_residues METTMAAFFPRHADGRQVFFTGLLIALGAVLYHCILVQPIDHGGDALFKWQVHRQMLALGAIPPQFYENPAHMLRWASNL PVLGVQWLFDSHPSSYFLCPVLIAAGNAVWCFVLGRRLGGQAAGILTALAFTAAQTTLHWGTQFLPMSTATFFMLGALWF LLRWMEREHYSDLLACSVMFFVSYGAKVTAIYYVPAICILLVYHVRSKGNSFRDAVPHVGTFLGVLVLLFCIETVLISSF TSISGGRFAGILAGHNPSVWDKDIFAAQDARWYDPLIGIYRDWRPSSKSLLQYIGNFFVYTRHPGKTQSITYYAAFILCV YALRTRKKTYYPAVAIYLSGFFASAYAIVSVFPFVRPERVLFRYHTIFYTLGQMMVISFLLHTRFPLIARYCKWFKDSYV RPLRVVLLLAFFAPLAVEAVKYFPVPNSIIAAADAYDTVQQARGEGRDVFIPVHKWPERTEKLQWKYVAFYSDLKRVPPP YSEETPHIVVNGQRYFRVEEGTTRENPILLDHY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58525; Mature: 58525
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure METTMAAFFPRHADGRQVFFTGLLIALGAVLYHCILVQPIDHGGDALFKWQVHRQMLALG CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHC AIPPQFYENPAHMLRWASNLPVLGVQWLFDSHPSSYFLCPVLIAAGNAVWCFVLGRRLGG CCCHHHHCCHHHHHHHHCCCCEEEEEEHCCCCCCCEEHHHHHHHCCCCEEEHHHHHHHCC QAAGILTALAFTAAQTTLHWGTQFLPMSTATFFMLGALWFLLRWMEREHYSDLLACSVMF HHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSYGAKVTAIYYVPAICILLVYHVRSKGNSFRDAVPHVGTFLGVLVLLFCIETVLISSF HHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSISGGRFAGILAGHNPSVWDKDIFAAQDARWYDPLIGIYRDWRPSSKSLLQYIGNFFVY HCCCCCCEEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCEEEE TRHPGKTQSITYYAAFILCVYALRTRKKTYYPAVAIYLSGFFASAYAIVSVFPFVRPERV ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LFRYHTIFYTLGQMMVISFLLHTRFPLIARYCKWFKDSYVRPLRVVLLLAFFAPLAVEAV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KYFPVPNSIIAAADAYDTVQQARGEGRDVFIPVHKWPERTEKLQWKYVAFYSDLKRVPPP HHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC YSEETPHIVVNGQRYFRVEEGTTRENPILLDHY CCCCCCEEEECCCEEEEEECCCCCCCCEEECCC >Mature Secondary Structure METTMAAFFPRHADGRQVFFTGLLIALGAVLYHCILVQPIDHGGDALFKWQVHRQMLALG CCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHC AIPPQFYENPAHMLRWASNLPVLGVQWLFDSHPSSYFLCPVLIAAGNAVWCFVLGRRLGG CCCHHHHCCHHHHHHHHCCCCEEEEEEHCCCCCCCEEHHHHHHHCCCCEEEHHHHHHHCC QAAGILTALAFTAAQTTLHWGTQFLPMSTATFFMLGALWFLLRWMEREHYSDLLACSVMF HHHHHHHHHHHHHHHHHHHCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVSYGAKVTAIYYVPAICILLVYHVRSKGNSFRDAVPHVGTFLGVLVLLFCIETVLISSF HHHCCCCEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSISGGRFAGILAGHNPSVWDKDIFAAQDARWYDPLIGIYRDWRPSSKSLLQYIGNFFVY HCCCCCCEEEEEECCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHCEEEE TRHPGKTQSITYYAAFILCVYALRTRKKTYYPAVAIYLSGFFASAYAIVSVFPFVRPERV ECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHH LFRYHTIFYTLGQMMVISFLLHTRFPLIARYCKWFKDSYVRPLRVVLLLAFFAPLAVEAV HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KYFPVPNSIIAAADAYDTVQQARGEGRDVFIPVHKWPERTEKLQWKYVAFYSDLKRVPPP HHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCC YSEETPHIVVNGQRYFRVEEGTTRENPILLDHY CCCCCCEEEECCCEEEEEECCCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA