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The map label for this gene is pduU [H]

Identifier: 78358304

GI number: 78358304

Start: 3260398

End: 3260757

Strand: Reverse

Name: pduU [H]

Synonym: Dde_3264

Alternate gene names: 78358304

Gene position: 3260757-3260398 (Counterclockwise)

Preceding gene: 78358305

Following gene: 78358303

Centisome position: 87.41

GC content: 58.33

Gene sequence:

>360_bases
ATGTCTGTATTCGGTAACGAGCCGAGACAAAGGGTCATTCAGGAATATGTGCCGGGCAAACAGGTGACGCTTGCCCATGT
CATCGCCAGTCCGCAGCAGGGGCTGTACCTCAAGCTCGGGCTTGACGGCGAGACAGCAGGCGCTCTGGGTATTCTGACCA
TCACTCCCAGCGAGGGGGTTATCATCGCGGCAGATATCGCCACCAAGGCGGCCTCTGTCGAAATAGGCTTCCTTGACCGG
TTCGGCGGGTCTTTGGTGCTGGTGGGCGATGTGGCCAGCGTGGAAGCTTCGCTCAAGGCTGTGCTGGGATATTTTGACGA
TGTGCTGCAGTACGCCGTTGTGGGACTGACAAGGTCGTAG

Upstream 100 bases:

>100_bases
GAAGGCCAGAATTTTGTAATACAAGGCGGTGCCGCAGGCGGCGGGCGGGCGCATGCGCCCGGGTACCCGCCGCCTGCGTT
TTTCAACCGGAGGCACGGAT

Downstream 100 bases:

>100_bases
CGCGTGTTTACGTCATGAAGAAAGTCATGCTTATCGGTGAGACCGGAGCGGGCAAAAGTTCGCTTATCCGGGCGCTGTCC
GGCGGGGAATTTGTTCCCCG

Product: putative propanediol utilization protein PduU

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSVFGNEPRQRVIQEYVPGKQVTLAHVIASPQQGLYLKLGLDGETAGALGILTITPSEGVIIAADIATKAASVEIGFLDR
FGGSLVLVGDVASVEASLKAVLGYFDDVLQYAVVGLTRS

Sequences:

>Translated_119_residues
MSVFGNEPRQRVIQEYVPGKQVTLAHVIASPQQGLYLKLGLDGETAGALGILTITPSEGVIIAADIATKAASVEIGFLDR
FGGSLVLVGDVASVEASLKAVLGYFDDVLQYAVVGLTRS
>Mature_118_residues
SVFGNEPRQRVIQEYVPGKQVTLAHVIASPQQGLYLKLGLDGETAGALGILTITPSEGVIIAADIATKAASVEIGFLDRF
GGSLVLVGDVASVEASLKAVLGYFDDVLQYAVVGLTRS

Specific function: May Be Involved In The Formation Of A Specific Microcompartiment In The Cell In Which The Metabolism Of Potentially Toxic By-Products Takes Place. [C]

COG id: COG4810

COG function: function code E; Ethanolamine utilization protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EutS/PduU family [H]

Homologues:

Organism=Escherichia coli, GI87082109, Length=111, Percent_Identity=50.4504504504504, Blast_Score=110, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009307
- InterPro:   IPR000249 [H]

Pfam domain/function: PF00936 BMC [H]

EC number: NA

Molecular weight: Translated: 12404; Mature: 12273

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVFGNEPRQRVIQEYVPGKQVTLAHVIASPQQGLYLKLGLDGETAGALGILTITPSEGV
CCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCE
IIAADIATKAASVEIGFLDRFGGSLVLVGDVASVEASLKAVLGYFDDVLQYAVVGLTRS
EEEEECCCCEEEEEEEEHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SVFGNEPRQRVIQEYVPGKQVTLAHVIASPQQGLYLKLGLDGETAGALGILTITPSEGV
CCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCCCE
IIAADIATKAASVEIGFLDRFGGSLVLVGDVASVEASLKAVLGYFDDVLQYAVVGLTRS
EEEEECCCCEEEEEEEEHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]