Click here to switch to the map view.

The map label for this gene is pspC [C]

Identifier: 78358264

GI number: 78358264

Start: 3214173

End: 3214604

Strand: Reverse

Name: pspC [C]

Synonym: Dde_3224

Alternate gene names: 78358264

Gene position: 3214604-3214173 (Counterclockwise)

Preceding gene: 78358265

Following gene: 78358254

Centisome position: 86.18

GC content: 58.1

Gene sequence:

>432_bases
ATGAGAAGATTTGGTCCTGCAGGCTGCCGCGGCGGCCGCAATCACAATACCTGTCCGCCGCCGGAAGGCAGAACGCTGTA
CCGCGCGCGTGACGGAAAGATAATGGGTGTGTGCAAGGGGCTGGCCGAATATTTTGAAGTCGAGCCGGTCTGGATACGCC
TGTTTACCATTCTCGGTGCGCTGGCGACAGGTATCTGGCCTGCGCTGGGAATTTATATTCTGGCCGGGCTGCTGATGAAG
CCTAAGCCCGTCATGCCGGTGCGCGATATCCACGAGGGAGAATTCTATTCTTCGTATGTATCTTCGCGCAAGGCGGCACT
GGCGCGGCTTAAGGAACAGTTTGCACGTCTTGACAGGCGTATCCGCCGTATGGAGGATGCCGTGACCAGCCGCGATTTTG
ACTGGCAGCGGCGGTTTGACGACAGACGCTGA

Upstream 100 bases:

>100_bases
AATTGTACAGGGGCATGAACCGTATGGAACAGCGGGTTGAAGCATTGGAAACGCTGCTGCTGGAGCGTGATGCGCGGTCC
GCCCGCAGGGAGGATGAGCG

Downstream 100 bases:

>100_bases
CCGCCCGGCGCGGTGAGGCGTCTTTTCGTCCGCAAAAGTGTTCTTCCGTGATTTCTCAGCGTTGTCCGGCGGTGCCTGCA
TGCTGCGCGGGCAATACCTG

Product: phage shock protein C, PspC

Products: NA

Alternate protein names: PspC Domain Family; Phage Shock Protein C

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MRRFGPAGCRGGRNHNTCPPPEGRTLYRARDGKIMGVCKGLAEYFEVEPVWIRLFTILGALATGIWPALGIYILAGLLMK
PKPVMPVRDIHEGEFYSSYVSSRKAALARLKEQFARLDRRIRRMEDAVTSRDFDWQRRFDDRR

Sequences:

>Translated_143_residues
MRRFGPAGCRGGRNHNTCPPPEGRTLYRARDGKIMGVCKGLAEYFEVEPVWIRLFTILGALATGIWPALGIYILAGLLMK
PKPVMPVRDIHEGEFYSSYVSSRKAALARLKEQFARLDRRIRRMEDAVTSRDFDWQRRFDDRR
>Mature_143_residues
MRRFGPAGCRGGRNHNTCPPPEGRTLYRARDGKIMGVCKGLAEYFEVEPVWIRLFTILGALATGIWPALGIYILAGLLMK
PKPVMPVRDIHEGEFYSSYVSSRKAALARLKEQFARLDRRIRRMEDAVTSRDFDWQRRFDDRR

Specific function: The Phage Shock Protein (Psp) Operon (Pspabce) May Play A Significant Role In The Competition For Survival Under Nutrient- Or Energy-Limited Conditions. Pspc Is Involved In Transcription Regulation. [C]

COG id: COG1983

COG function: function code KT; Putative stress-responsive transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16516; Mature: 16516

Theoretical pI: Translated: 10.71; Mature: 10.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRFGPAGCRGGRNHNTCPPPEGRTLYRARDGKIMGVCKGLAEYFEVEPVWIRLFTILGA
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LATGIWPALGIYILAGLLMKPKPVMPVRDIHEGEFYSSYVSSRKAALARLKEQFARLDRR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRRMEDAVTSRDFDWQRRFDDRR
HHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MRRFGPAGCRGGRNHNTCPPPEGRTLYRARDGKIMGVCKGLAEYFEVEPVWIRLFTILGA
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LATGIWPALGIYILAGLLMKPKPVMPVRDIHEGEFYSSYVSSRKAALARLKEQFARLDRR
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
IRRMEDAVTSRDFDWQRRFDDRR
HHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA