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The map label for this gene is cheD

Identifier: 78358252

GI number: 78358252

Start: 3203263

End: 3203901

Strand: Reverse

Name: cheD

Synonym: Dde_3212

Alternate gene names: 78358252

Gene position: 3203901-3203263 (Counterclockwise)

Preceding gene: 78358253

Following gene: 78358247

Centisome position: 85.89

GC content: 60.88

Gene sequence:

>639_bases
ATGTCCGGATACAGTGCGGAACAGCGCGCCGCCATGCAGTGCATGTCGCTGGCCCGTCATGGTTTACCCCATGCGCTGGC
CGACTGCGGACTGCCTCATGTACATCTGAAGATAGGCGAGGGCATCGTCACGCGGCGGGCATTGCTTATCTCCACTGTGC
TGGGGTCTTGTGTTTCGGTCACGTTTTTTAGCCGCAGACTGCAGCTGGCGGGCATCTTTCATGCAATGCTGCCGGTGATC
ACGCAAAGCTACCGGCCCTGTAACGAGCCGTGCCGGTTTGTTGATTCGGCCATAGAGGCGGTGTACGGCAACTTTGAAAA
GCGCGGCCTGCATCCCGAAGAGGTGGAGGTGAAGCTGTTCGGCGGCGCCTTCAGCATGGGGCTGCGCGAAGAACATCCTG
ACCGGTGCATGATAGATGTGGGCGGGCGTAATGTGCTGACCGCGCGTGAGGTTCTGGCCGCCAAAGGGCTGGAGATACGC
AGCGAACAGGTGCAGGGCACGCGTGGCCGCAAGCTGCTTTTCAATACGCGTACGGGCGAAGTGTGGGTGAAGCTGCTGAA
CAACGCGGCCAACCAGCTTGCCCGCAGGCAGGAAGAACAGGCCAGAGCGCAGAGCGCCCGCGGATGTTCTCTGGACTGA

Upstream 100 bases:

>100_bases
GAACTGGTCAACCCCTGATTCCGGCCTTACTCCGCGCGCCTGCCGTTTTGCGGTGCGTGCCGTGTCTGTCCGGTCCGGTA
TCGGGAAAGGGCTTCCTGTC

Downstream 100 bases:

>100_bases
CGTGCGGCTGGCGCGCGTATTATGCGACAGAAATACGAAAGCCCGTCCGGAGTTTCCGGACGGGCTTTTTGTGTACGGCA
GCGGGCATTGCCGGAGGTTC

Product: CheD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MSGYSAEQRAAMQCMSLARHGLPHALADCGLPHVHLKIGEGIVTRRALLISTVLGSCVSVTFFSRRLQLAGIFHAMLPVI
TQSYRPCNEPCRFVDSAIEAVYGNFEKRGLHPEEVEVKLFGGAFSMGLREEHPDRCMIDVGGRNVLTAREVLAAKGLEIR
SEQVQGTRGRKLLFNTRTGEVWVKLLNNAANQLARRQEEQARAQSARGCSLD

Sequences:

>Translated_212_residues
MSGYSAEQRAAMQCMSLARHGLPHALADCGLPHVHLKIGEGIVTRRALLISTVLGSCVSVTFFSRRLQLAGIFHAMLPVI
TQSYRPCNEPCRFVDSAIEAVYGNFEKRGLHPEEVEVKLFGGAFSMGLREEHPDRCMIDVGGRNVLTAREVLAAKGLEIR
SEQVQGTRGRKLLFNTRTGEVWVKLLNNAANQLARRQEEQARAQSARGCSLD
>Mature_211_residues
SGYSAEQRAAMQCMSLARHGLPHALADCGLPHVHLKIGEGIVTRRALLISTVLGSCVSVTFFSRRLQLAGIFHAMLPVIT
QSYRPCNEPCRFVDSAIEAVYGNFEKRGLHPEEVEVKLFGGAFSMGLREEHPDRCMIDVGGRNVLTAREVLAAKGLEIRS
EQVQGTRGRKLLFNTRTGEVWVKLLNNAANQLARRQEEQARAQSARGCSLD

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CHED_DESDG (Q30WE0)

Other databases:

- EMBL:   CP000112
- RefSeq:   YP_389701.1
- ProteinModelPortal:   Q30WE0
- SMR:   Q30WE0
- STRING:   Q30WE0
- GeneID:   3758187
- GenomeReviews:   CP000112_GR
- KEGG:   dde:Dde_3212
- NMPDR:   fig|207559.3.peg.2899
- eggNOG:   COG1871
- HOGENOM:   HBG531149
- OMA:   AGIFHAM
- ProtClustDB:   CLSK706081
- BioCyc:   DDES207559:DDE_3212-MONOMER
- GO:   GO:0006935
- HAMAP:   MF_01440
- InterPro:   IPR005659

Pfam domain/function: PF03975 CheD

EC number: =3.5.1.44

Molecular weight: Translated: 23402; Mature: 23271

Theoretical pI: Translated: 8.92; Mature: 8.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGYSAEQRAAMQCMSLARHGLPHALADCGLPHVHLKIGEGIVTRRALLISTVLGSCVSV
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
TFFSRRLQLAGIFHAMLPVITQSYRPCNEPCRFVDSAIEAVYGNFEKRGLHPEEVEVKLF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEE
GGAFSMGLREEHPDRCMIDVGGRNVLTAREVLAAKGLEIRSEQVQGTRGRKLLFNTRTGE
CCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCHHH
VWVKLLNNAANQLARRQEEQARAQSARGCSLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SGYSAEQRAAMQCMSLARHGLPHALADCGLPHVHLKIGEGIVTRRALLISTVLGSCVSV
CCCCHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHH
TFFSRRLQLAGIFHAMLPVITQSYRPCNEPCRFVDSAIEAVYGNFEKRGLHPEEVEVKLF
HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEE
GGAFSMGLREEHPDRCMIDVGGRNVLTAREVLAAKGLEIRSEQVQGTRGRKLLFNTRTGE
CCHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHCCCCCCEEEEECCHHH
VWVKLLNNAANQLARRQEEQARAQSARGCSLD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA