| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
Click here to switch to the map view.
The map label for this gene is 78355881
Identifier: 78355881
GI number: 78355881
Start: 860553
End: 861815
Strand: Direct
Name: 78355881
Synonym: Dde_0834
Alternate gene names: NA
Gene position: 860553-861815 (Clockwise)
Preceding gene: 78355880
Following gene: 78355882
Centisome position: 23.07
GC content: 55.74
Gene sequence:
>1263_bases ATGAAGTATTTCTTCCGGCTCCTTGTGGCTGTGATGCTCAGCCTGCCGCTGTGTGCGCAGGCTGCGGAAATCGATCTGAA AGCAGGTATCGGCGCGGGGGGCGAATATAACGACAACGTGGATGAACGCGCGGGCGGCCGCGGTGACTTCATCACACATG TCAAACCCACGCTGGGAGCCACCTACGAAGGGGGCAGGGTAACAGGATCGCTGCTGTATTCAGGCGACTACCAGTACTAC AAAGACGGCACCTATGAAGACGATTATAACCACAAGCTTGCGGCCAAGGTGCTGGTCAATGCTGTCGAGGACTTTTTTTA TATAAGCCTGACAGATACCTATAGTTCGGTGTATTCAGATGCACGGCGGGGTGAAGTCATTGAAGGTGACGAGACGTCTT CGTCCGGCACGGTGGATAAAAATGTGGCCACACTGTCGCCGTATTTTGTGCTTAATCCCGACGAGCGCACGCAGATAAAT ACGGGATACAGGCTGCGGGACGTGCGTTATGCCCAGAAAGACGACGGCACCAACAAAATTTCGCACGAGCTTTTTGCGGA CGCGAACAGAGAAATTTCTGAACGGTTGAGCGGTCTGGCGGGGTATTCCTTTACGGTGGAAAACGCCGAAGAGGACGAGG GGTCTTCAGACGACCTGACGCGGCACAGAGTTTATGTAGGGGGCACCTACGACTATGCCGAAGACTCGCGGATTTCCTTG CGGTTCGGGCCCTCGTTCAACGAATACGACAAGGGCGGCTCCGCGGTGGAGATGTACTACGAAGCTTCGCTGGTGCACAC ATTCGGTTCGGTGGTGGGTACGCTTGGTTTCGTGCAGGATTATCAGGATGATCCTGATTCCGGCGAACTGCTGCTGACAA GTACATACTCTGCCGGACTGACAAAGATTTTTGACAGGGCAACCCTGTCGCTGAACATGCAGTACCGCGAATCGGAAGAG GCTGAAGATTCGGCCGGTGACGGTCAGGATTCGGGCAGCGGCACCACCCGCAGCTGGCGGCCTTCGTTACGGGGTACATA TGAGCTTTCGCCCAGAGCCACGCTGGGCGGCGGCCTGACATACGAAAGCGAAGACGCCCCCGATGGTGTGACTGACCGCT GGTACTGTGATGCTTCGCTGTCGTACGCCATGCAGGAGAATGTTACCGCAAGCCTGACGTACAGATATAAAAGCGTGGAC GAAGCGGGTGAAAACCCGTGGGCCGCAAACCGCATTATGGCCGAAGTCGGCGTCACGTTCTAA
Upstream 100 bases:
>100_bases GAGCAGTGGGGTACAGGGTTTGATGGCATAACTGGATACTGTGTGCGGTGGTTTCTTCTGCGGCACCTGTCAGGCAACCT GAACCCTAACGGAAAGAAAC
Downstream 100 bases:
>100_bases CGTCCGTGAATCCTTCTTTCGGCGCACCCGCGCAAGCTGAAAGGAGGATACCGCATGCGCAATGCCCTTACTGTCGATGT GGAGGATTATTTCCATGTCA
Product: putative lipoprotein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 420; Mature: 420
Protein sequence:
>420_residues MKYFFRLLVAVMLSLPLCAQAAEIDLKAGIGAGGEYNDNVDERAGGRGDFITHVKPTLGATYEGGRVTGSLLYSGDYQYY KDGTYEDDYNHKLAAKVLVNAVEDFFYISLTDTYSSVYSDARRGEVIEGDETSSSGTVDKNVATLSPYFVLNPDERTQIN TGYRLRDVRYAQKDDGTNKISHELFADANREISERLSGLAGYSFTVENAEEDEGSSDDLTRHRVYVGGTYDYAEDSRISL RFGPSFNEYDKGGSAVEMYYEASLVHTFGSVVGTLGFVQDYQDDPDSGELLLTSTYSAGLTKIFDRATLSLNMQYRESEE AEDSAGDGQDSGSGTTRSWRPSLRGTYELSPRATLGGGLTYESEDAPDGVTDRWYCDASLSYAMQENVTASLTYRYKSVD EAGENPWAANRIMAEVGVTF
Sequences:
>Translated_420_residues MKYFFRLLVAVMLSLPLCAQAAEIDLKAGIGAGGEYNDNVDERAGGRGDFITHVKPTLGATYEGGRVTGSLLYSGDYQYY KDGTYEDDYNHKLAAKVLVNAVEDFFYISLTDTYSSVYSDARRGEVIEGDETSSSGTVDKNVATLSPYFVLNPDERTQIN TGYRLRDVRYAQKDDGTNKISHELFADANREISERLSGLAGYSFTVENAEEDEGSSDDLTRHRVYVGGTYDYAEDSRISL RFGPSFNEYDKGGSAVEMYYEASLVHTFGSVVGTLGFVQDYQDDPDSGELLLTSTYSAGLTKIFDRATLSLNMQYRESEE AEDSAGDGQDSGSGTTRSWRPSLRGTYELSPRATLGGGLTYESEDAPDGVTDRWYCDASLSYAMQENVTASLTYRYKSVD EAGENPWAANRIMAEVGVTF >Mature_420_residues MKYFFRLLVAVMLSLPLCAQAAEIDLKAGIGAGGEYNDNVDERAGGRGDFITHVKPTLGATYEGGRVTGSLLYSGDYQYY KDGTYEDDYNHKLAAKVLVNAVEDFFYISLTDTYSSVYSDARRGEVIEGDETSSSGTVDKNVATLSPYFVLNPDERTQIN TGYRLRDVRYAQKDDGTNKISHELFADANREISERLSGLAGYSFTVENAEEDEGSSDDLTRHRVYVGGTYDYAEDSRISL RFGPSFNEYDKGGSAVEMYYEASLVHTFGSVVGTLGFVQDYQDDPDSGELLLTSTYSAGLTKIFDRATLSLNMQYRESEE AEDSAGDGQDSGSGTTRSWRPSLRGTYELSPRATLGGGLTYESEDAPDGVTDRWYCDASLSYAMQENVTASLTYRYKSVD EAGENPWAANRIMAEVGVTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46285; Mature: 46285
Theoretical pI: Translated: 4.18; Mature: 4.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYFFRLLVAVMLSLPLCAQAAEIDLKAGIGAGGEYNDNVDERAGGRGDFITHVKPTLGA CHHHHHHHHHHHHHCCHHHHHHCEEEECCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCC TYEGGRVTGSLLYSGDYQYYKDGTYEDDYNHKLAAKVLVNAVEDFFYISLTDTYSSVYSD CCCCCEEEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEHHHHHHHHH ARRGEVIEGDETSSSGTVDKNVATLSPYFVLNPDERTQINTGYRLRDVRYAQKDDGTNKI HHCCCEECCCCCCCCCCCCCCEEEECCEEEECCCCCCEECCCEEEEEEEECCCCCCCCHH SHELFADANREISERLSGLAGYSFTVENAEEDEGSSDDLTRHRVYVGGTYDYAEDSRISL HHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEECCEECCCCCCEEEE RFGPSFNEYDKGGSAVEMYYEASLVHTFGSVVGTLGFVQDYQDDPDSGELLLTSTYSAGL EECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHH TKIFDRATLSLNMQYRESEEAEDSAGDGQDSGSGTTRSWRPSLRGTYELSPRATLGGGLT HHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCE YESEDAPDGVTDRWYCDASLSYAMQENVTASLTYRYKSVDEAGENPWAANRIMAEVGVTF ECCCCCCCCCCCCEEECCHHHHHHHCCCEEEEEEEEECHHHCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure MKYFFRLLVAVMLSLPLCAQAAEIDLKAGIGAGGEYNDNVDERAGGRGDFITHVKPTLGA CHHHHHHHHHHHHHCCHHHHHHCEEEECCCCCCCCCCCCHHHHCCCCCCEEEECCCCCCC TYEGGRVTGSLLYSGDYQYYKDGTYEDDYNHKLAAKVLVNAVEDFFYISLTDTYSSVYSD CCCCCEEEEEEEEECCEEEECCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEHHHHHHHHH ARRGEVIEGDETSSSGTVDKNVATLSPYFVLNPDERTQINTGYRLRDVRYAQKDDGTNKI HHCCCEECCCCCCCCCCCCCCEEEECCEEEECCCCCCEECCCEEEEEEEECCCCCCCCHH SHELFADANREISERLSGLAGYSFTVENAEEDEGSSDDLTRHRVYVGGTYDYAEDSRISL HHHHHHCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEECCEECCCCCCEEEE RFGPSFNEYDKGGSAVEMYYEASLVHTFGSVVGTLGFVQDYQDDPDSGELLLTSTYSAGL EECCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHH TKIFDRATLSLNMQYRESEEAEDSAGDGQDSGSGTTRSWRPSLRGTYELSPRATLGGGLT HHHHCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCE YESEDAPDGVTDRWYCDASLSYAMQENVTASLTYRYKSVDEAGENPWAANRIMAEVGVTF ECCCCCCCCCCCCEEECCHHHHHHHCCCEEEEEEEEECHHHCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA