| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is yqhO [H]
Identifier: 78355866
GI number: 78355866
Start: 839869
End: 840888
Strand: Direct
Name: yqhO [H]
Synonym: Dde_0819
Alternate gene names: 78355866
Gene position: 839869-840888 (Clockwise)
Preceding gene: 78355865
Following gene: 78355867
Centisome position: 22.52
GC content: 58.24
Gene sequence:
>1020_bases GTGTATGCCAATCTTGTGTTTAAAGGAGGCGGCGTAAAGGGCGTTGCCTACGCCGGAGCATTGAAAGTGCTTGAGCGGCG GGGTCTGCTGCAGGGTGTAAGAAGGGTGGCGGGAGCATCTTCCGGTGCCATGGCGGCAGCTTTTCTGGCTTTGGGGGCCA GTCCGGCCGATATGGCAGATATCGTGCTGCGTACCCCCTTCAGGCGGTTTATGGATTCTTCCGGCTGGGTGGGCGGCGAT ATCCGCAGGCTGCTTACGGAATACGGCTGGTTTAAAGGAGATATGCTCAGCCGGTGGGTGCGGTCCAATGTGCAGGCGCT TACCGGCAGCAGCCAGCTTACCTTTTCCGAACTGCGGGCGCTGGCTGCCGGTGAGCCTGCCCGTTTTCGCGAGCTTACAG TGGTGGGGGCCAATCTTACGCTGCAGGCGTCCGAACTGTTTGATGCCGATGCAACCCCTGACATGCCGGTGTGGGAGGCT GTACGCATATCCATGGGCATTCCGCTGTTTTTTCGCGCCATGCGTGCCAGAAGCGGAGATTTGCTGGTGGACGGCAGCGT TACATGGAATTATCCGGTCACGCTTTTTGATCAGTGGCGCTATGTGAACGGCGGTCAGCCGCGGCCCCCCGTAGCGGCGG ACGGTCTGCCCGCGGCGGAAGGAGGCGGCGTGCCCGGCGAGGTGTTCAATACGCGGACTCTCGGATTTATGGTGGAAACA CGTGATGCAGTACAGGCGCGCAAAGAGATGCGCAGCGCAGCAGGCATTGACGGTTTCGGGGCGTATCTGCGTTCCATAAT CGGATTCATGACCGATGTTTCGTGCAGTTCGTTTCTGACAGAGGCTGACTGGAACAGAACCGTTTTTATTGAGGCGCTTG GAGTGCGTACCACTGATTTTGCCATCAGCAGAGACATGATTGCCCGTCTGGTAGACAGCGGCGAGCAGGGAGCGGAATTA TATTTTTCTAAAAAACAGTCTGCCGGAACAGCAGCGCCATGCAGCGGAGGCTGTGATTAG
Upstream 100 bases:
>100_bases TGCACGCCTTTGTCGAACGCTCTGTGGCGGCTGCAGGTGAAGTGAATTCTGTGTAAGTTTTTTCGACAGGGCCTGCGTTG TCACGGCAAGGAGCGTCACT
Downstream 100 bases:
>100_bases AAAAAGAGTTTCTTCTGTGATGTGAAAGGATGAGAAACACTGCATGGCACCGGAAGGCCTGTGCATCAGCATGACTGTTG CCTGTCTGCGAAGTGGTCTG
Product: alpha-beta hydrolase superfamily esterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 339
Protein sequence:
>339_residues MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMADIVLRTPFRRFMDSSGWVGGD IRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRALAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEA VRISMGIPLFFRAMRARSGDLLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDFAISRDMIARLVDSGEQGAEL YFSKKQSAGTAAPCSGGCD
Sequences:
>Translated_339_residues MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMADIVLRTPFRRFMDSSGWVGGD IRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRALAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEA VRISMGIPLFFRAMRARSGDLLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDFAISRDMIARLVDSGEQGAEL YFSKKQSAGTAAPCSGGCD >Mature_339_residues MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMADIVLRTPFRRFMDSSGWVGGD IRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRALAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEA VRISMGIPLFFRAMRARSGDLLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDFAISRDMIARLVDSGEQGAEL YFSKKQSAGTAAPCSGGCD
Specific function: Probable lipid hydrolase [H]
COG id: COG1752
COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 patatin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016035 - InterPro: IPR002641 [H]
Pfam domain/function: PF01734 Patatin [H]
EC number: NA
Molecular weight: Translated: 36418; Mature: 36418
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMAD CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH IVLRTPFRRFMDSSGWVGGDIRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRA HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH LAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEAVRISMGIPLFFRAMRARSGD HHCCCCCCEEEEEEECCCEEEEHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCC LLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET EEEECCEEECCCEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEC RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCHHH AISRDMIARLVDSGEQGAELYFSKKQSAGTAAPCSGGCD HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure MYANLVFKGGGVKGVAYAGALKVLERRGLLQGVRRVAGASSGAMAAAFLALGASPADMAD CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHH IVLRTPFRRFMDSSGWVGGDIRRLLTEYGWFKGDMLSRWVRSNVQALTGSSQLTFSELRA HHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHH LAAGEPARFRELTVVGANLTLQASELFDADATPDMPVWEAVRISMGIPLFFRAMRARSGD HHCCCCCCEEEEEEECCCEEEEHHHHCCCCCCCCCCHHHHHHHHCCCHHHHHHHHCCCCC LLVDGSVTWNYPVTLFDQWRYVNGGQPRPPVAADGLPAAEGGGVPGEVFNTRTLGFMVET EEEECCEEECCCEEEEECEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEEEEC RDAVQARKEMRSAAGIDGFGAYLRSIIGFMTDVSCSSFLTEADWNRTVFIEALGVRTTDF HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEEECCCCHHH AISRDMIARLVDSGEQGAELYFSKKQSAGTAAPCSGGCD HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]