| Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
|---|---|
| Accession | NC_007519 |
| Length | 3,730,232 |
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The map label for this gene is 78355732
Identifier: 78355732
GI number: 78355732
Start: 701046
End: 702701
Strand: Direct
Name: 78355732
Synonym: Dde_0685
Alternate gene names: NA
Gene position: 701046-702701 (Clockwise)
Preceding gene: 78355731
Following gene: 78355733
Centisome position: 18.79
GC content: 60.27
Gene sequence:
>1656_bases ATGAACATCGGCAAGTACACGTTTGAAGAGTTCAAGGAACTGGCCGCCGCTTTTCACAGTTATCCCGCTCCGGGGCTTCT GCTCGGGGGGTATATGGTGGAAATGGCCCGTCGTCATCTGCCCGAGGGGACGTTGTTCGAGGCCATGGTGGAGTCGGCCA AATGTCTGCCGGATGCTGTTCAGCTGCTGACTTTGTGCAGCACAGGCAACCAGTGGATGAAGGTTGTTCCGCTGGGCCGT TATGCGGTGTCGCTGTATGACAAATATACAGGGGAGGGGTACCGGGTATACGTCGATGCCGCCAAACTCAAGGCGTGGCC CGAGTACTACGCATGGTTCATGAAGCTGCGTCCCAAGGCGGAGCAGGATTCCGACCAGCTGTTCAGAGAGATTGAGGAGG CGGGCGAGTCCGTATGCTCCATTCAGGCTGTGCGCATCGATCCCAAGCATCTGGGGCACGCGCACATGGGAGAAGTGGGG GTATGTCCTGTCTGCGGCGAACCGTATCCTTCCCGCGACGGCGGTATATGCCGCGGCTGTCAGGGCGAGGCTCCTTATGT GGTGGATGCCCGTGAGGGGGGCTCCGGCGCTGCCGGCGGTGTGCTCGAGCGGGCCCCGCTGCGCGTGGTGCCGGTGGAAG ATGCCTACGGCAGAACAGCGCTGCATGATATGACGGAGATTATTCCCGACGAGGCCAAGGGACCGGCTGTGCTGGCCGGA CAGACGCTGGAAGCGGGCGACCTGTGCCGTCTGCAGCGTATGGGCAAGTTTCATGTCTATGACGATTCGGCTTTGCCCGG TTCCGAGTGGGTGCATGAAAACGACGCCGTGCAGGCATTTGCCGCCCGTATGGCAGGGCAGGGGGTGGAGTATGACCTGC CGCCGCGTGAGGGCAAAATCAATTTCCGTGCTGCCCGTACAGGTATGCTGAGCATTGATCTGGAAGCGCTTGAGCGGTTT AATCTGGTGCCGGATGTCATGCTGGCAACCCGCCATCATGCAGCGGTTGTGGAGGAAGGACGCCTGATAGCCGGCAGCCG CGCCATTCCATTGTACCTGTCACAGGAACATTTCAGCAGGGCTTTGACTGCGCTGGGGGACAGTCCGGTGCTTTCCGTGC TGCCGCTGAAAGTGAAAAAAGCAGCTGTGCTGGTTACCGGAACAGAGGTGTTTCAGGGACTGATAGAAGACCGGTTTATT CCCATTGTCACCGGCAAACTGATGGGGCTGGGCTGCGAGGTGGTGAGCAGCAGTATTGTTCCCGATGACAGAGAAGCCAT AGCGCAGGCCGTACGGGGTTTTCTGGAACAGGGCGCTGAACTGGTGGTGACCACGGCAGGCATGAGCGTGGATCCCGACG ATGTGACCCGCGCCGGACTGGTGGACGCCGGCCTGACTGATGCGTTGTACGGCATGCCGGTGCTGCCCGGCACCATGACG CTGGTGGGCAGACTGCGCCACAACGGAACCGTGGCCCGCGTGATAGGAGTGCCCGCATGTGCGTTGTATTACAAAACGAC AGGGTTTGATCTGCTGCTGCCGCGCCTGCTGGCGGGATGCGATGTGGCCCGCCGTGATCTGGCCCGGCTGGCAGAAGGCG GATTCTGCCATAACTGCAAAACCTGTACATGGCCCAAATGTCCGTTCGGTAAATAG
Upstream 100 bases:
>100_bases TGCATTCTGTTGCACTGCCCGCAGGCGCGGAATGTGATGCCGCCTTTGTGCGGCGCGCAGTTTGTTGCAACCGATAAACG GAAAGAAGGCTGTTACGCGT
Downstream 100 bases:
>100_bases ACTGTGCAGCCTCCGGAGGTGCCCCGTTCGGCACCGCTTTCCGGAAAGAGCAATACCCGGCGCCCCGTTCCTGCCGCAGG CTGGTTGCGGGGCGTCGGTC
Product: tungsten formylmethanofuran dehydrogenase family protein/molybdopterin binding protein
Products: NA
Alternate protein names: Formylmethanofuran Dehydrogenase Subunit E Region; 4-Diphosphocytidyl-2C-Methyl-D-Erythritol Synthase; Molybdenum Cofactor Biosynthesis Protein; Formylmethanofuran Dehydrogenase Subunit E; Molybdenum Cofactor Cytidylyltransferase; Molybdopterin Biosynthesis; Molybdenum Cofactor Synthesis Domain Protein; Protein Family UPF; Molybdopterin Biosynthesis Protein MoeA; Molybdenum Formylmethanofuran Dehydrogenase Subunit E; Molybdenum Cofactor Biosynthesis Family Protein; L-Seryl-TRNA(Ser) Selenium Transferase Protein; MobA-Like Protein-Like Protein; TUNGsten Formylmethanofuran Dehydrogenase Subunit E
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MNIGKYTFEEFKELAAAFHSYPAPGLLLGGYMVEMARRHLPEGTLFEAMVESAKCLPDAVQLLTLCSTGNQWMKVVPLGR YAVSLYDKYTGEGYRVYVDAAKLKAWPEYYAWFMKLRPKAEQDSDQLFREIEEAGESVCSIQAVRIDPKHLGHAHMGEVG VCPVCGEPYPSRDGGICRGCQGEAPYVVDAREGGSGAAGGVLERAPLRVVPVEDAYGRTALHDMTEIIPDEAKGPAVLAG QTLEAGDLCRLQRMGKFHVYDDSALPGSEWVHENDAVQAFAARMAGQGVEYDLPPREGKINFRAARTGMLSIDLEALERF NLVPDVMLATRHHAAVVEEGRLIAGSRAIPLYLSQEHFSRALTALGDSPVLSVLPLKVKKAAVLVTGTEVFQGLIEDRFI PIVTGKLMGLGCEVVSSSIVPDDREAIAQAVRGFLEQGAELVVTTAGMSVDPDDVTRAGLVDAGLTDALYGMPVLPGTMT LVGRLRHNGTVARVIGVPACALYYKTTGFDLLLPRLLAGCDVARRDLARLAEGGFCHNCKTCTWPKCPFGK
Sequences:
>Translated_551_residues MNIGKYTFEEFKELAAAFHSYPAPGLLLGGYMVEMARRHLPEGTLFEAMVESAKCLPDAVQLLTLCSTGNQWMKVVPLGR YAVSLYDKYTGEGYRVYVDAAKLKAWPEYYAWFMKLRPKAEQDSDQLFREIEEAGESVCSIQAVRIDPKHLGHAHMGEVG VCPVCGEPYPSRDGGICRGCQGEAPYVVDAREGGSGAAGGVLERAPLRVVPVEDAYGRTALHDMTEIIPDEAKGPAVLAG QTLEAGDLCRLQRMGKFHVYDDSALPGSEWVHENDAVQAFAARMAGQGVEYDLPPREGKINFRAARTGMLSIDLEALERF NLVPDVMLATRHHAAVVEEGRLIAGSRAIPLYLSQEHFSRALTALGDSPVLSVLPLKVKKAAVLVTGTEVFQGLIEDRFI PIVTGKLMGLGCEVVSSSIVPDDREAIAQAVRGFLEQGAELVVTTAGMSVDPDDVTRAGLVDAGLTDALYGMPVLPGTMT LVGRLRHNGTVARVIGVPACALYYKTTGFDLLLPRLLAGCDVARRDLARLAEGGFCHNCKTCTWPKCPFGK >Mature_551_residues MNIGKYTFEEFKELAAAFHSYPAPGLLLGGYMVEMARRHLPEGTLFEAMVESAKCLPDAVQLLTLCSTGNQWMKVVPLGR YAVSLYDKYTGEGYRVYVDAAKLKAWPEYYAWFMKLRPKAEQDSDQLFREIEEAGESVCSIQAVRIDPKHLGHAHMGEVG VCPVCGEPYPSRDGGICRGCQGEAPYVVDAREGGSGAAGGVLERAPLRVVPVEDAYGRTALHDMTEIIPDEAKGPAVLAG QTLEAGDLCRLQRMGKFHVYDDSALPGSEWVHENDAVQAFAARMAGQGVEYDLPPREGKINFRAARTGMLSIDLEALERF NLVPDVMLATRHHAAVVEEGRLIAGSRAIPLYLSQEHFSRALTALGDSPVLSVLPLKVKKAAVLVTGTEVFQGLIEDRFI PIVTGKLMGLGCEVVSSSIVPDDREAIAQAVRGFLEQGAELVVTTAGMSVDPDDVTRAGLVDAGLTDALYGMPVLPGTMT LVGRLRHNGTVARVIGVPACALYYKTTGFDLLLPRLLAGCDVARRDLARLAEGGFCHNCKTCTWPKCPFGK
Specific function: Unknown
COG id: COG0303
COG function: function code H; Molybdopterin biosynthesis enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59658; Mature: 59658
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIGKYTFEEFKELAAAFHSYPAPGLLLGGYMVEMARRHLPEGTLFEAMVESAKCLPDAV CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH QLLTLCSTGNQWMKVVPLGRYAVSLYDKYTGEGYRVYVDAAKLKAWPEYYAWFMKLRPKA HHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEHHHHHCCHHHHHHHHHHCCCC EQDSDQLFREIEEAGESVCSIQAVRIDPKHLGHAHMGEVGVCPVCGEPYPSRDGGICRGC CCCHHHHHHHHHHHCHHHHEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECC QGEAPYVVDAREGGSGAAGGVLERAPLRVVPVEDAYGRTALHDMTEIIPDEAKGPAVLAG CCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEC QTLEAGDLCRLQRMGKFHVYDDSALPGSEWVHENDAVQAFAARMAGQGVEYDLPPREGKI CCCCCCHHHHHHHCCCEEEECCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCE NFRAARTGMLSIDLEALERFNLVPDVMLATRHHAAVVEEGRLIAGSRAIPLYLSQEHFSR EEEEECCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCEEEEECHHHHHH ALTALGDSPVLSVLPLKVKKAAVLVTGTEVFQGLIEDRFIPIVTGKLMGLGCEVVSSSIV HHHHCCCCCCHHHCCEEEEEEEEEEECHHHHHHHHHCCCEEEEEHHHHHCCHHHHHCCCC PDDREAIAQAVRGFLEQGAELVVTTAGMSVDPDDVTRAGLVDAGLTDALYGMPVLPGTMT CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHH LVGRLRHNGTVARVIGVPACALYYKTTGFDLLLPRLLAGCDVARRDLARLAEGGFCHNCK HHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC TCTWPKCPFGK CCCCCCCCCCC >Mature Secondary Structure MNIGKYTFEEFKELAAAFHSYPAPGLLLGGYMVEMARRHLPEGTLFEAMVESAKCLPDAV CCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHH QLLTLCSTGNQWMKVVPLGRYAVSLYDKYTGEGYRVYVDAAKLKAWPEYYAWFMKLRPKA HHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCEEEEEEHHHHHCCHHHHHHHHHHCCCC EQDSDQLFREIEEAGESVCSIQAVRIDPKHLGHAHMGEVGVCPVCGEPYPSRDGGICRGC CCCHHHHHHHHHHHCHHHHEEEEEEECHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECC QGEAPYVVDAREGGSGAAGGVLERAPLRVVPVEDAYGRTALHDMTEIIPDEAKGPAVLAG CCCCCEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCEEEEC QTLEAGDLCRLQRMGKFHVYDDSALPGSEWVHENDAVQAFAARMAGQGVEYDLPPREGKI CCCCCCHHHHHHHCCCEEEECCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCE NFRAARTGMLSIDLEALERFNLVPDVMLATRHHAAVVEEGRLIAGSRAIPLYLSQEHFSR EEEEECCCEEEEEHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEECCCCEEEEECHHHHHH ALTALGDSPVLSVLPLKVKKAAVLVTGTEVFQGLIEDRFIPIVTGKLMGLGCEVVSSSIV HHHHCCCCCCHHHCCEEEEEEEEEEECHHHHHHHHHCCCEEEEEHHHHHCCHHHHHCCCC PDDREAIAQAVRGFLEQGAELVVTTAGMSVDPDDVTRAGLVDAGLTDALYGMPVLPGTMT CCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHCCCCCCHHHHHHCCCCCCHHHH LVGRLRHNGTVARVIGVPACALYYKTTGFDLLLPRLLAGCDVARRDLARLAEGGFCHNCK HHHHHHCCCCEEEEECCCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCC TCTWPKCPFGK CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA