Definition | Desulfovibrio desulfuricans subsp. desulfuricans str. G20 chromosome, complete genome. |
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Accession | NC_007519 |
Length | 3,730,232 |
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The map label for this gene is 78355690
Identifier: 78355690
GI number: 78355690
Start: 661666
End: 662943
Strand: Direct
Name: 78355690
Synonym: Dde_0643
Alternate gene names: NA
Gene position: 661666-662943 (Clockwise)
Preceding gene: 78355688
Following gene: 78355691
Centisome position: 17.74
GC content: 61.03
Gene sequence:
>1278_bases ATGGGAAAACTGAATGTCGATGATCTGAAAGAAGGCATGGTGCTGGCCGCAGACGTATGCGGCCGCGACGGCAGGACACT GCTGGGCGCCGGTGCCGCGCTGCAGGAGCGCCACCTGCGTATATTCAAGGCGTGGGGTGTTACCGAGGCGGATATCGAGG GTGTGGACCGCTCTGACATGGAGCAGGAACACGAAGCCGAACTGCCGCCCGAAGTGCTGGAGGCCGCGCGTGCGCGTGTG GATGCCCGTATGGGCCGCCACGGCGGCAGCGAGCTGGAGCATGAGCTGCGGCGTATAACAACGCTGCGGCTGAGCGCCCG CATACTGCACGATGGCATGCCCGAAACCGAGGAACTGGATTACGGGGCGTTGCGGGCCTGTGCGGCCAAAGACTCGTTTG ATAAAGACCGCACCTCGGTCCATTCGGTTGTGGATGATCAGGTGCAGCTGCTTTCTTTCCCCGACATTTATTTCCGCATT GTCAAGGTGCTGGAGTCGCCCAGCAGTTCTTCGCGCAAGCTGGCGGAAGTGGTCAGCACGGACGCCAGTCTGGCGGCACG GCTTCTGCGGCTTGTGAACAGCCCGTTTTACGGGTTCCCTTCCAAAATCGACTCCATAGCGCGGGCCATCACCCTTATCG GCGCCAACGAACTGGTCACCCTTGCTCTGGGTATTTCCGTCATGCGGGTTTTTTCCGGTGTGCCCTCGGGGGGCTTCAAC ATGCGGCGCTTCTGGGAACATTCCATCCTGTGCGGCCTGTTTTCGCGGCTGATCGCCGGGCACAAGATGGGGCTTTCGGA AGAACGGCTGTTTGTAGGCGGGCTGCTGCACGATCTGGGCGAGCTGCTCATGCTCAGCAGGCATCCGCGTACCATGTGCC GGACCATGGTGTACGCCCATGAGCAGCAGGTGCCGCTGTATCAGGCGGAAAAAGCCGTGTTCGGCTTTGATCATGCCGGA GCAGGCAGCCTGCTGCTGAACCGCTGGAATCTGCCCGACGGCCTTGTGCGCATGGTGGGGTATCATCACCTGCCGGACAG GGTGCGGGCGCCTCTGGAAGCTTCCGTGGTGCATGTTGCCGATATCATGTCTTTTCTGTTCCGTATTGAGGATGTTCCCG CGGGAATGGTGCTGTCCGGACTGAACGGCGCGGCAATAAACAAACTGGGGCTGGCGCCTTCGGCTGTGCAGACAATGATG GCGCAGGCGGGCAGGCAGTTTGAGGCCATTTCCGGTGTGTTCTTTGACACCGGTCAGGAAGCGCGGGACAAGGCATGA
Upstream 100 bases:
>100_bases TAGCGTATGCAGTCTTTCGGGTAAACAGAATAGGCAGCGGTGGCGGATGAATCCAAAGAAGGCTATGCTGCCTGTGAAGA GGAAAGCGAGTGGAGCATTC
Downstream 100 bases:
>100_bases ATCAGCAAGGGGCAGAAACGGAGCAGGATCTGCGGGCGCGGGTGCCGGACGAGCGCAGAGCCACGCTGGCCGCGCTGGAG CTGGCAGCCACCCTGAGCCA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MGKLNVDDLKEGMVLAADVCGRDGRTLLGAGAALQERHLRIFKAWGVTEADIEGVDRSDMEQEHEAELPPEVLEAARARV DARMGRHGGSELEHELRRITTLRLSARILHDGMPETEELDYGALRACAAKDSFDKDRTSVHSVVDDQVQLLSFPDIYFRI VKVLESPSSSSRKLAEVVSTDASLAARLLRLVNSPFYGFPSKIDSIARAITLIGANELVTLALGISVMRVFSGVPSGGFN MRRFWEHSILCGLFSRLIAGHKMGLSEERLFVGGLLHDLGELLMLSRHPRTMCRTMVYAHEQQVPLYQAEKAVFGFDHAG AGSLLLNRWNLPDGLVRMVGYHHLPDRVRAPLEASVVHVADIMSFLFRIEDVPAGMVLSGLNGAAINKLGLAPSAVQTMM AQAGRQFEAISGVFFDTGQEARDKA
Sequences:
>Translated_425_residues MGKLNVDDLKEGMVLAADVCGRDGRTLLGAGAALQERHLRIFKAWGVTEADIEGVDRSDMEQEHEAELPPEVLEAARARV DARMGRHGGSELEHELRRITTLRLSARILHDGMPETEELDYGALRACAAKDSFDKDRTSVHSVVDDQVQLLSFPDIYFRI VKVLESPSSSSRKLAEVVSTDASLAARLLRLVNSPFYGFPSKIDSIARAITLIGANELVTLALGISVMRVFSGVPSGGFN MRRFWEHSILCGLFSRLIAGHKMGLSEERLFVGGLLHDLGELLMLSRHPRTMCRTMVYAHEQQVPLYQAEKAVFGFDHAG AGSLLLNRWNLPDGLVRMVGYHHLPDRVRAPLEASVVHVADIMSFLFRIEDVPAGMVLSGLNGAAINKLGLAPSAVQTMM AQAGRQFEAISGVFFDTGQEARDKA >Mature_424_residues GKLNVDDLKEGMVLAADVCGRDGRTLLGAGAALQERHLRIFKAWGVTEADIEGVDRSDMEQEHEAELPPEVLEAARARVD ARMGRHGGSELEHELRRITTLRLSARILHDGMPETEELDYGALRACAAKDSFDKDRTSVHSVVDDQVQLLSFPDIYFRIV KVLESPSSSSRKLAEVVSTDASLAARLLRLVNSPFYGFPSKIDSIARAITLIGANELVTLALGISVMRVFSGVPSGGFNM RRFWEHSILCGLFSRLIAGHKMGLSEERLFVGGLLHDLGELLMLSRHPRTMCRTMVYAHEQQVPLYQAEKAVFGFDHAGA GSLLLNRWNLPDGLVRMVGYHHLPDRVRAPLEASVVHVADIMSFLFRIEDVPAGMVLSGLNGAAINKLGLAPSAVQTMMA QAGRQFEAISGVFFDTGQEARDKA
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 46638; Mature: 46507
Theoretical pI: Translated: 6.46; Mature: 6.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGKLNVDDLKEGMVLAADVCGRDGRTLLGAGAALQERHLRIFKAWGVTEADIEGVDRSDM CCCCCHHHHHCCCEEEHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHH EQEHEAELPPEVLEAARARVDARMGRHGGSELEHELRRITTLRLSARILHDGMPETEELD HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC YGALRACAAKDSFDKDRTSVHSVVDDQVQLLSFPDIYFRIVKVLESPSSSSRKLAEVVST HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHC DASLAARLLRLVNSPFYGFPSKIDSIARAITLIGANELVTLALGISVMRVFSGVPSGGFN CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCH MRRFWEHSILCGLFSRLIAGHKMGLSEERLFVGGLLHDLGELLMLSRHPRTMCRTMVYAH HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EQQVPLYQAEKAVFGFDHAGAGSLLLNRWNLPDGLVRMVGYHHLPDRVRAPLEASVVHVA HCCCCHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHH DIMSFLFRIEDVPAGMVLSGLNGAAINKLGLAPSAVQTMMAQAGRQFEAISGVFFDTGQE HHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCH ARDKA HCCCC >Mature Secondary Structure GKLNVDDLKEGMVLAADVCGRDGRTLLGAGAALQERHLRIFKAWGVTEADIEGVDRSDM CCCCHHHHHCCCEEEHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCHHHH EQEHEAELPPEVLEAARARVDARMGRHGGSELEHELRRITTLRLSARILHDGMPETEELD HHHHHCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCC YGALRACAAKDSFDKDRTSVHSVVDDQVQLLSFPDIYFRIVKVLESPSSSSRKLAEVVST HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHC DASLAARLLRLVNSPFYGFPSKIDSIARAITLIGANELVTLALGISVMRVFSGVPSGGFN CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCH MRRFWEHSILCGLFSRLIAGHKMGLSEERLFVGGLLHDLGELLMLSRHPRTMCRTMVYAH HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH EQQVPLYQAEKAVFGFDHAGAGSLLLNRWNLPDGLVRMVGYHHLPDRVRAPLEASVVHVA HCCCCHHHHHHHHHCCCCCCCCHHEEECCCCCHHHHHHHHHHCCCHHHCCCHHHHHHHHH DIMSFLFRIEDVPAGMVLSGLNGAAINKLGLAPSAVQTMMAQAGRQFEAISGVFFDTGQE HHHHHHHHHHCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCH ARDKA HCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]